RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, human

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTF3A-208	ENST00000493903	ZNF474	Q6S9Z5	364 aa	Predicted RBP	4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	ERN2	Q76MJ5	926 aa	Known RBP	4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	MCEMP1	Q8IX19	187 aa		4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	XXYLT1	Q8NBI6	393 aa		4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	MCU	Q8NE86	351 aa		4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903		Q8TCH9	128 aa		4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	HDAC7	Q8WUI4	952 aa		4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	SECISBP2L	Q93073	1101 aa	Known RBP	4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	ZKSCAN4	Q969J2	545 aa	Predicted RBP	4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	CCDC47	Q96A33	483 aa	Known RBP	4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	MOAP1	Q96BY2	351 aa		4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	P2RY11	Q96G91	374 aa		4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	CCDC43	Q96MW1	224 aa	Known RBP	4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	SEPT5	Q99719	369 aa	Predicted RBP	4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	NAA11	Q9BSU3	229 aa	Predicted RBP	4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	SLC25A23	Q9BV35	468 aa		4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	IFT27	Q9BW83	186 aa		4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	PLK3	Q9H4B4	646 aa		4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	CD248	Q9HCU0	757 aa		4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	RANGRF	Q9HD47	186 aa	Predicted RBP	4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	MBNL1	Q9NR56	388 aa	Known RBP	4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	GDE1	Q9NZC3	331 aa		4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	NLK	Q9UBE8	527 aa		4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	CNOT8	Q9UFF9	292 aa	Known RBP	4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	ISY1	Q9ULR0	285 aa	Known RBP	4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	CARD8	Q9Y2G2	431 aa		4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	FAM96B	Q9Y3D0	163 aa		4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	CMAHP	Q9Y471	501 aa		4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	HEMK1	Q9Y5R4	338 aa	Predicted RBP	4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	EMSY	Q7Z589	1322 aa		4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	FANCD2	Q9BXW9	1451 aa		4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	ARHGEF11	O15085	1522 aa		4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	URB2	Q14146	1524 aa	Known RBP	4.6	□□□□□ -1.67
GTF3A-208	ENST00000493903	LOC102723996	A0A087X1L8	192 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	FAM237A	A0A1B0GTK4	181 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903		A6NL46	340 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	NPIPB11	E5RHQ5	1161 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903		H0YIZ8	118 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	SNAP23	O00161	211 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	EBAG9	O00559	213 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	SYNCRIP	O60506	623 aa	Known RBP	4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	FMO6P	O60774	539 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	DDAH2	O95865	285 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	FDPS	P14324	419 aa	Known RBP	4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	AKR1A1	P14550	325 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	ZNF182	P17025	639 aa	Predicted RBP	4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	ATF7	P17544	494 aa	Predicted RBP	4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	FPR3	P25089	353 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	TLX1	P31314	330 aa	Predicted RBP	4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	MCM7	P33993	719 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	EEFSEC	P57772	596 aa	Known RBP	4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	BLOC1S1	P78537	153 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	TMF1	P82094	1093 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	UBXN1	Q04323	297 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	PLP2	Q04941	152 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	ZBTB16	Q05516	673 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	WASHC5	Q12768	1159 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	CAMK2D	Q13557	499 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	TP53BP2	Q13625	1128 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	DRAP1	Q14919	205 aa	Predicted RBP	4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	SLMAP	Q14BN4	828 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	NAB2	Q15742	525 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	ANXA2R	Q3ZCQ2	193 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	MMEL1	Q495T6	779 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	ABHD17B	Q5VST6	288 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	TRAT1	Q6PIZ9	186 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	VSTM1	Q6UX27	236 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	ZNF804A	Q7Z570	1209 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	UBE2Q1	Q7Z7E8	422 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	RFX6	Q8HWS3	928 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	ARHGEF19	Q8IW93	802 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	CCDC170	Q8IYT3	715 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	FAM185A	Q8N0U4	392 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	FAM47B	Q8NA70	645 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	WIPF2	Q8TF74	440 aa	Predicted RBP	4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	NSMCE1	Q8WV22	266 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	CELF1	Q92879	486 aa	Known RBP	4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	ARSG	Q96EG1	525 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	ELMOD3	Q96FG2	381 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	ZNF347	Q96SE7	839 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	MMS19	Q96T76	1030 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	PAFAH2	Q99487	392 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	SYT17	Q9BSW7	474 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	SETD4	Q9NVD3	440 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	TES	Q9UGI8	421 aa	Known RBP	4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	TNFSF13B	Q9Y275	285 aa		4.59	□□□□□ -1.67
GTF3A-208	ENST00000493903	WIZ	O95785	1651 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	CFTR	P13569	1480 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	MST1R	Q04912	1400 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	TCRBV7S3A2	A0A539	114 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903		B8ZZF3	427 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	BTBD19	C9JJ37	291 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	DAB1	O75553	588 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	C22orf31	O95567	290 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	TTLL1	O95922	423 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	EGR2	P11161	476 aa	Predicted RBP	4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	PCNA	P12004	261 aa		4.58	□□□□□ -1.68

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