RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 FBXL19Q6PCT2 694 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 POC5Q8NA72 575 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 SH3GLB1Q9Y371 365 aa20.25■□□□□ 0.83
RNF40-203ENST00000493683 NRCAMQ92823 1304 aa20.24■□□□□ 0.83
RNF40-203ENST00000493683 GJB6O95452 261 aa20.24■□□□□ 0.83
RNF40-203ENST00000493683 KLRC2P26717 231 aa20.24■□□□□ 0.83
RNF40-203ENST00000493683 CDK9P50750 372 aaKnown RBP20.24■□□□□ 0.83
RNF40-203ENST00000493683 ACLYP53396 1101 aa20.24■□□□□ 0.83
RNF40-203ENST00000493683 NOMO3P69849 1222 aa20.24■□□□□ 0.83
RNF40-203ENST00000493683 FOLH1Q04609 750 aa20.24■□□□□ 0.83
RNF40-203ENST00000493683 CXCL9Q07325 125 aa20.24■□□□□ 0.83
RNF40-203ENST00000493683 TRAPPC5Q8IUR0 188 aa20.24■□□□□ 0.83
RNF40-203ENST00000493683 LRRC17Q8N6Y2 441 aa20.24■□□□□ 0.83
RNF40-203ENST00000493683 CEP170BQ9Y4F5 1589 aaPredicted RBP20.24■□□□□ 0.83
RNF40-203ENST00000493683 MTRF1O75570 445 aaKnown RBP20.24■□□□□ 0.83
RNF40-203ENST00000493683 MRIQ9BWK5 157 aa20.24■□□□□ 0.83
RNF40-203ENST00000493683 PTGFRNQ9P2B2 879 aa20.24■□□□□ 0.83
RNF40-203ENST00000493683 LGALS2P05162 132 aa20.24■□□□□ 0.83
RNF40-203ENST00000493683 COL6A2P12110 1019 aa20.24■□□□□ 0.83
RNF40-203ENST00000493683 CAPGP40121 348 aa20.24■□□□□ 0.83
RNF40-203ENST00000493683 NPNTQ6UXI9 565 aa20.24■□□□□ 0.83
RNF40-203ENST00000493683 HIPK1Q86Z02 1210 aa20.24■□□□□ 0.83
RNF40-203ENST00000493683 TMEM161BQ8NDZ6 487 aa20.24■□□□□ 0.83
RNF40-203ENST00000493683 LENG1Q96BZ8 264 aaPredicted RBP20.24■□□□□ 0.83
RNF40-203ENST00000493683 CHID1Q9BWS9 393 aa20.24■□□□□ 0.83
RNF40-203ENST00000493683 AP4B1Q9Y6B7 739 aa20.24■□□□□ 0.83
RNF40-203ENST00000493683 ITSN1Q15811 1721 aa20.24■□□□□ 0.83
RNF40-203ENST00000493683 FGF1P05230 155 aa20.24■□□□□ 0.83
RNF40-203ENST00000493683 DLG4P78352 724 aa20.24■□□□□ 0.83
RNF40-203ENST00000493683 DDR1Q08345 913 aa20.24■□□□□ 0.83
RNF40-203ENST00000493683 FNDC3BQ53EP0 1204 aaKnown RBP20.24■□□□□ 0.83
RNF40-203ENST00000493683 SLC25A24Q6NUK1 477 aa20.24■□□□□ 0.83
RNF40-203ENST00000493683 GCNT7Q6ZNI0 430 aa20.24■□□□□ 0.83
RNF40-203ENST00000493683 SPATA19Q7Z5L4 167 aa20.24■□□□□ 0.83
RNF40-203ENST00000493683 DNAJC19Q96DA6 116 aa20.24■□□□□ 0.83
RNF40-203ENST00000493683 SSR3Q9UNL2 185 aa20.24■□□□□ 0.83
RNF40-203ENST00000493683 PDHXO00330 501 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 ADRB2P07550 413 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 VEGFAP15692 232 aaPredicted RBP20.23■□□□□ 0.83
RNF40-203ENST00000493683 IL12AP29459 219 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 WEE1P30291 646 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 PPM1LQ5SGD2 360 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 SWT1Q5T5J6 900 aaKnown RBP20.23■□□□□ 0.83
RNF40-203ENST00000493683 BORCS5Q969J3 196 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 SMPD4Q9NXE4 827 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 SLC12A4Q9UP95 1085 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 KPNA3O00505 521 aaPredicted RBP20.23■□□□□ 0.83
RNF40-203ENST00000493683 ADCY6O43306 1168 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 ENTPD5O75356 428 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 PRKAR1AP10644 381 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 HECTD3Q5T447 861 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 KBTBD2Q8IY47 623 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 DNAJB14Q8TBM8 379 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 DGCR14Q96DF8 476 aaKnown RBP20.23■□□□□ 0.83
RNF40-203ENST00000493683 NARS2Q96I59 477 aaKnown RBP20.23■□□□□ 0.83
RNF40-203ENST00000493683 ZNF607Q96SK3 696 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 CPA4Q9UI42 421 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 LYVE1Q9Y5Y7 322 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 MAFO75444 373 aaPredicted RBP20.23■□□□□ 0.83
RNF40-203ENST00000493683 S100A9P06702 114 aaKnown RBP20.23■□□□□ 0.83
RNF40-203ENST00000493683 MAPK9P45984 424 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 MAPK10P53779 464 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 LGALS3BPQ08380 585 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 C12orf56Q8IXR9 622 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 HEXDCQ8WVB3 486 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 KCTD4Q8WVF5 259 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 SNX15Q9NRS6 342 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 LRRC14BA6NHZ5 514 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 AREL1O15033 823 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 IDH3BO43837 385 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 RIPK1Q13546 671 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 VSIG10LQ86VR7 867 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 SUSD6Q92537 303 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 AKAP7Q9P0M2 348 aaPredicted RBP20.23■□□□□ 0.83
RNF40-203ENST00000493683 UBIAD1Q9Y5Z9 338 aa20.23■□□□□ 0.83
RNF40-203ENST00000493683 BMP7P18075 431 aa20.22■□□□□ 0.83
RNF40-203ENST00000493683 FAM92BQ6ZTR7 304 aa20.22■□□□□ 0.83
RNF40-203ENST00000493683 LEMD2Q8NC56 503 aa20.22■□□□□ 0.83
RNF40-203ENST00000493683 HELQQ8TDG4 1101 aa20.22■□□□□ 0.83
RNF40-203ENST00000493683 RPL9P32969 192 aaKnown RBP20.22■□□□□ 0.83
RNF40-203ENST00000493683 CHKAP35790 457 aa20.22■□□□□ 0.83
RNF40-203ENST00000493683 SRP54P61011 504 aaKnown RBP20.22■□□□□ 0.83
RNF40-203ENST00000493683 RCN3Q96D15 328 aa20.22■□□□□ 0.83
RNF40-203ENST00000493683 INPP4AQ96PE3 977 aaPredicted RBP20.22■□□□□ 0.83
RNF40-203ENST00000493683 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.22■□□□□ 0.83
RNF40-203ENST00000493683 UGT2B11O75310 529 aa20.22■□□□□ 0.83
RNF40-203ENST00000493683 AVILO75366 819 aa20.22■□□□□ 0.83
RNF40-203ENST00000493683 CLK3P49761 638 aaKnown RBP20.22■□□□□ 0.83
RNF40-203ENST00000493683 RPL38P63173 70 aaKnown RBP20.22■□□□□ 0.83
RNF40-203ENST00000493683 MTAPQ13126 283 aa20.22■□□□□ 0.83
RNF40-203ENST00000493683 ACVR2BQ13705 512 aa20.22■□□□□ 0.83
RNF40-203ENST00000493683 BTG3Q14201 252 aaPredicted RBP20.22■□□□□ 0.83
RNF40-203ENST00000493683 CELF3Q5SZQ8 465 aaKnown RBP20.22■□□□□ 0.83
RNF40-203ENST00000493683 AADACL2Q6P093 401 aa20.22■□□□□ 0.83
RNF40-203ENST00000493683 RBM44Q6ZP01 1051 aaKnown RBP20.22■□□□□ 0.83
RNF40-203ENST00000493683 ADORA2AP29274 412 aa20.22■□□□□ 0.83
RNF40-203ENST00000493683 PACS1Q6VY07 963 aa20.22■□□□□ 0.83
RNF40-203ENST00000493683 MTFMTQ96DP5 389 aaKnown RBP20.22■□□□□ 0.83
RNF40-203ENST00000493683 PSMD13Q9UNM6 376 aa20.22■□□□□ 0.83
RNF40-203ENST00000493683 SAMD4AQ9UPU9 718 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms