RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 NDST3O95803 873 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 MT-CYBP00156 380 aaPredicted RBP11.65□□□□□ -0.54
LSM2-214ENST00000493387 NDUFV2P19404 249 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 HLA-DPA1P20036 260 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 OXTRP30559 389 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 GKP32189 559 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 MAGEA6P43360 314 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 VPS41P49754 854 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 NEK3P51956 506 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 EPHB1P54762 984 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 BASP1P80723 227 aaKnown RBP11.65□□□□□ -0.54
LSM2-214ENST00000493387 TRAF2Q12933 501 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 TMEM31Q5JXX7 168 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 ANO7Q6IWH7 933 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 FBXL19Q6PCT2 694 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 ERN2Q76MJ5 926 aaKnown RBP11.65□□□□□ -0.54
LSM2-214ENST00000493387 PRUNE1Q86TP1 453 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 RASSF3Q86WH2 238 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 C1orf210Q8IVY1 113 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 TMEM105Q8N8V8 129 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 IPMKQ8NFU5 416 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 GANCQ8TET4 914 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 PDCD6IPQ8WUM4 868 aaKnown RBP11.65□□□□□ -0.54
LSM2-214ENST00000493387 HHIPQ96QV1 700 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 OMDQ99983 421 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 ERP44Q9BS26 406 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 MLPHQ9BV36 600 aaPredicted RBP11.65□□□□□ -0.54
LSM2-214ENST00000493387 TDRD1Q9BXT4 1180 aaKnown RBP11.65□□□□□ -0.54
LSM2-214ENST00000493387 ITM2CQ9NQX7 267 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 PRMT8Q9NR22 394 aaPredicted RBP11.65□□□□□ -0.54
LSM2-214ENST00000493387 FBXL12Q9NXK8 326 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 FBXO4Q9UKT5 387 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 SARDHQ9UL12 918 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 FZD4Q9ULV1 537 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 TPX2Q9ULW0 747 aaKnown RBP11.65□□□□□ -0.54
LSM2-214ENST00000493387 CHKBQ9Y259 395 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 PCDHB9Q9Y5E1 797 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 EFCAB8A8MWE9 144 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 UPK3BL1B0FP48 263 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 UPK3BL2E5RIL1 263 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 K7ESF4 209 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 FZD6O60353 706 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 GJB3O75712 270 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 SUN1O94901 812 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 SLU7O95391 586 aaKnown RBP11.64□□□□□ -0.55
LSM2-214ENST00000493387 CPP00450 1065 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 FGF1P05230 155 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 APRTP07741 180 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 TIMP2P16035 220 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 ITIH2P19823 946 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 TPSB2P20231 275 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 ADRA1AP35348 466 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 GRIA4P48058 902 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 DRG2P55039 364 aaKnown RBP11.64□□□□□ -0.55
LSM2-214ENST00000493387 ELP6Q0PNE2 266 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 TPSAB1Q15661 275 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 PCSK7Q16549 785 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 FAXCQ5TGI0 409 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 KCTD11Q693B1 232 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 ERAP2Q6P179 960 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 RANBP10Q6VN20 620 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 USP45Q70EL2 814 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 TTC7BQ86TV6 843 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 HOOK3Q86VS8 718 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 PPIL6Q8IXY8 311 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 HDDC3Q8N4P3 179 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 PDCD7Q8N8D1 485 aaKnown RBP11.64□□□□□ -0.55
LSM2-214ENST00000493387 ARRDC3Q96B67 414 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 SNF8Q96H20 258 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 MRGPRX2Q96LB1 330 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 NSMCE3Q96MG7 304 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 TBL1YQ9BQ87 522 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 FAM126AQ9BYI3 521 aaPredicted RBP11.64□□□□□ -0.55
LSM2-214ENST00000493387 FRMD8Q9BZ67 464 aaPredicted RBP11.64□□□□□ -0.55
LSM2-214ENST00000493387 KDM4CQ9H3R0 1056 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 SGK2Q9HBY8 427 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 ARNT2Q9HBZ2 717 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 POLR3BQ9NW08 1133 aaPredicted RBP11.64□□□□□ -0.55
LSM2-214ENST00000493387 C2orf42Q9NWW7 574 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 UBP1Q9NZI7 540 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 PPIL1Q9Y3C6 166 aa11.64□□□□□ -0.55
LSM2-214ENST00000493387 ANKRD66B4E2M5 251 aa11.63□□□□□ -0.55
LSM2-214ENST00000493387 F5H423 210 aaPredicted RBP11.63□□□□□ -0.55
LSM2-214ENST00000493387 DNALI1O14645 258 aaPredicted RBP11.63□□□□□ -0.55
LSM2-214ENST00000493387 AXIN1O15169 862 aa11.63□□□□□ -0.55
LSM2-214ENST00000493387 AP1G1O43747 822 aa11.63□□□□□ -0.55
LSM2-214ENST00000493387 RNASEH2AO75792 299 aaKnown RBP11.63□□□□□ -0.55
LSM2-214ENST00000493387 PRLP01236 227 aa11.63□□□□□ -0.55
LSM2-214ENST00000493387 IGLV3-19P01714 112 aa11.63□□□□□ -0.55
LSM2-214ENST00000493387 CYP2A6P11509 494 aaPredicted RBP11.63□□□□□ -0.55
LSM2-214ENST00000493387 ADRB3P13945 408 aa11.63□□□□□ -0.55
LSM2-214ENST00000493387 CALCOCO2Q13137 446 aa11.63□□□□□ -0.55
LSM2-214ENST00000493387 IHHQ14623 411 aa11.63□□□□□ -0.55
LSM2-214ENST00000493387 MORF4L2Q15014 288 aa11.63□□□□□ -0.55
LSM2-214ENST00000493387 UGP2Q16851 508 aa11.63□□□□□ -0.55
LSM2-214ENST00000493387 DUPD1Q68J44 220 aa11.63□□□□□ -0.55
LSM2-214ENST00000493387 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.63□□□□□ -0.55
LSM2-214ENST00000493387 PPP1R21Q6ZMI0 780 aa11.63□□□□□ -0.55
LSM2-214ENST00000493387 PARS2Q7L3T8 475 aaKnown RBP11.63□□□□□ -0.55
LSM2-214ENST00000493387 TAB3Q8N5C8 712 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms