RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 BIRC5O15392 142 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 SLC7A4O43246 635 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 LDB2O43679 373 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 GSTA1P08263 222 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 F7P08709 466 aaPredicted RBP9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 BGNP21810 368 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 POLD2P49005 469 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 PRAMEP78395 509 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 LMAN2Q12907 356 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 IFT88Q13099 833 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 CAMK1Q14012 370 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 GRM3Q14832 879 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 SLC5A9Q2M3M2 681 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 TAF1BQ53T94 588 aaPredicted RBP9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 PRSS36Q5K4E3 855 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 C9orf50Q5SZB4 431 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 RNF43Q68DV7 783 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 CGB2Q6NT52 195 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 NEPROQ6NW34 567 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 NCEH1Q6PIU2 408 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 TPGS1Q6ZTW0 290 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 CMC1Q7Z7K0 106 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 METTL3Q86U44 580 aaKnown RBP9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 RNF135Q8IUD6 432 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 DENND6AQ8IWF6 608 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 LMNTD2Q8IXW0 634 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 CCDC63Q8NA47 563 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 LPCAT1Q8NF37 534 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 OR13J1Q8NGT2 312 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 FIBINQ8TAL6 211 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 RAB3IL1Q8TBN0 382 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 BRSK1Q8TDC3 778 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 STYXQ8WUJ0 223 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 ACDQ96AP0 544 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 TSNARE1Q96NA8 513 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 PLCD4Q9BRC7 762 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 MFSD1Q9H3U5 465 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 SLCO1B3Q9NPD5 702 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 FBXO5Q9UKT4 447 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 SLC39A10Q9ULF5 831 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 CHKBQ9Y259 395 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 ANKRD6Q9Y2G4 727 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 ARL2BPQ9Y2Y0 163 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 MTO1Q9Y2Z2 717 aaKnown RBP9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 RAI2Q9Y5P3 530 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 MYO7AQ13402 2215 aa9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 KIF26AQ9ULI4 1882 aaPredicted RBP9.21□□□□□ -0.94
SMARCC1-208ENST00000492896 A0A096LPK6 155 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 FAM95CA0A1B0GW59 222 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 KLF11O14901 512 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 PLIN3O60664 434 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 RPP40O75818 363 aaKnown RBP9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 CRTAMO95727 393 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 CD160O95971 181 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 TOP3BO95985 862 aaKnown RBP9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 IL1BP01584 269 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 PROCP04070 461 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 PRKCGP05129 697 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 BPGMP07738 259 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 TROVE2P10155 538 aaKnown RBP eCLIP9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 TCF3P15923 654 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 CLCN5P51795 746 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 ERVK-21P61565 698 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 AP1S1P61966 158 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 NTHL1P78549 312 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 ACVR1Q04771 509 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 SF3A3Q12874 501 aaKnown RBP eCLIP9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 ILF2Q12905 390 aaKnown RBP9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 TRAF2Q12933 501 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 CTBP1Q13363 440 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 SLC12A1Q13621 1099 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 USP10Q14694 798 aaKnown RBP9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 ZNF77Q15935 545 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 PLEKHG6Q3KR16 790 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 CCDC153Q494R4 210 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 RNF187Q5TA31 235 aaPredicted RBP9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 ATG16L1Q676U5 607 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 FAM109BQ6ICB4 259 aaPredicted RBP9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 C16orf46Q6P387 395 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 CCDC121Q6ZUS5 278 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 RAPH1Q70E73 1250 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 OTOAQ7RTW8 1153 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 GLT6D1Q7Z4J2 308 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 GRASPQ7Z6J2 395 aaPredicted RBP9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 YTHDF3Q7Z739 585 aaKnown RBP9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 GALNT7Q86SF2 657 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 SRLQ86TD4 932 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 NUDCD3Q8IVD9 361 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 SLC41A1Q8IVJ1 513 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 APCDD1Q8J025 514 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 ZNF557Q8N988 423 aaPredicted RBP9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 OR6P1Q8NGX9 317 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 USP13Q92995 863 aaPredicted RBP9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 HDAC10Q969S8 669 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 RMDN1Q96DB5 314 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 MYO19Q96H55 970 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 ELMO2Q96JJ3 720 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 DNAJC1Q96KC8 554 aaKnown RBP9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 NSMCE3Q96MG7 304 aa9.2□□□□□ -0.94
SMARCC1-208ENST00000492896 MECRQ9BV79 373 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms