RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 LACRTQ9GZZ8 138 aa10.76□□□□□ -0.69
CDC42SE1-206ENST00000492796 BRD8Q9H0E9 1235 aa10.76□□□□□ -0.69
CDC42SE1-206ENST00000492796 GOLPH3Q9H4A6 298 aa10.76□□□□□ -0.69
CDC42SE1-206ENST00000492796 SLC32A1Q9H598 525 aa10.76□□□□□ -0.69
CDC42SE1-206ENST00000492796 GAREM1Q9H706 876 aa10.76□□□□□ -0.69
CDC42SE1-206ENST00000492796 SCUBE2Q9NQ36 999 aa10.76□□□□□ -0.69
CDC42SE1-206ENST00000492796 GDF3Q9NR23 364 aa10.76□□□□□ -0.69
CDC42SE1-206ENST00000492796 SALL4Q9UJQ4 1053 aa10.76□□□□□ -0.69
CDC42SE1-206ENST00000492796 PCDHGB2Q9Y5G2 931 aa10.76□□□□□ -0.69
CDC42SE1-206ENST00000492796 SNX11Q9Y5W9 270 aa10.76□□□□□ -0.69
CDC42SE1-206ENST00000492796 TRAFD1O14545 582 aaPredicted RBP10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 WNT9AO14904 365 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 PPP1R12AO14974 1030 aaPredicted RBP10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 SLC31A1O15431 190 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 YKT6O15498 198 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 ZRANB2O95218 330 aaKnown RBP eCLIP10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 MAP3K6O95382 1288 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 TIMP2P16035 220 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 PRLRP16471 622 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 TGM2P21980 687 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 CES1P23141 567 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 NFKBIAP25963 317 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 CTNNA1P35221 906 aaKnown RBP10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 MMP12P39900 470 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 CDKN2BP42772 138 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 NR2C2P49116 596 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 CCT8P50990 548 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 NXPH1P58417 271 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 PPIDQ08752 370 aaKnown RBP10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 SGCGQ13326 291 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 TFDP2Q14188 446 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 PDK1Q15118 436 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 TAZQ16635 292 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 TMEM52BQ4KMG9 183 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 TFDP3Q5H9I0 405 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 ALG1LQ6GMV1 187 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 SPOCD1Q6ZMY3 1216 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 BZW1Q7L1Q6 419 aaKnown RBP10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 PIP4P1Q86T03 277 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 CCDC13Q8IYE1 715 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 RCOR2Q8IZ40 523 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 PGBD5Q8N414 524 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 CCNYQ8ND76 341 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 OR2I1PQ8NGU4 316 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 CXorf40AQ8TE69 158 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 OLFM3Q96PB7 478 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 LENG8Q96PV6 779 aaPredicted RBP10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 C1QTNF7Q9BXJ2 289 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 C1QTNF2Q9BXJ5 285 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 NT5MQ9NPB1 228 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 TM7SF3Q9NS93 570 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 GGT7Q9UJ14 662 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 ITM2BQ9Y287 266 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 FNDC3AQ9Y2H6 1198 aaKnown RBP10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 ATP8A1Q9Y2Q0 1164 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 HEY1Q9Y5J3 304 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 HS3ST3A1Q9Y663 406 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 DUSP10Q9Y6W6 482 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 TRPM6Q9BX84 2022 aa10.75□□□□□ -0.69
CDC42SE1-206ENST00000492796 hCG_1818297A0A087WSY0 165 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 CCDC66A2RUB6 948 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 CFAP69A5D8W1 941 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 IGLON5A6NGN9 336 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 A6NNZ2 444 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 TLR4O00206 839 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 RIOK3O14730 519 aaKnown RBP10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 ARHGAP6O43182 974 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 HTRA2O43464 458 aaPredicted RBP10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 NEBLO76041 1014 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 TM7SF2O76062 418 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 KCNK5O95279 499 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 CEACAM1P13688 526 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 CD59P13987 128 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 CCNB1P14635 433 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 CTNNA2P26232 953 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 MARCKSL1P49006 195 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 NOVA1P51513 510 aaKnown RBP10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 MAXP61244 160 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 IFI35P80217 286 aaPredicted RBP10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 SLC10A2Q12908 348 aaPredicted RBP10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 SUZ12Q15022 739 aaKnown RBP10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 PPP2R5EQ16537 467 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 PPM1JQ5JR12 505 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 LRRC73Q5JTD7 316 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 KYAT3Q6YP21 454 aaKnown RBP10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 GCNT7Q6ZNI0 430 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 ABI3BPQ7Z7G0 1075 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 DCP2Q8IU60 420 aaKnown RBP10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 CCDC50Q8IVM0 306 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 SYCE1Q8N0S2 351 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 PAF1Q8N7H5 531 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 KIAA1524Q8TCG1 905 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 KLK6Q92876 244 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 KLHDC7BQ96G42 594 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 ELF4Q99607 663 aaPredicted RBP10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 DESI2Q9BSY9 194 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 TSGA10Q9BZW7 698 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 ERVMER34-1Q9H9K5 563 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 IL21RQ9HBE5 538 aa10.74□□□□□ -0.69
CDC42SE1-206ENST00000492796 FZD3Q9NPG1 666 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms