RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 ZNF670Q9BS34 389 aa24.91■■□□□ 1.58
UPF3A-209ENST00000492270 SCNM1Q9BWG6 230 aa24.91■■□□□ 1.58
UPF3A-209ENST00000492270 PCDH12Q9NPG4 1184 aa24.91■■□□□ 1.58
UPF3A-209ENST00000492270 TOR4AQ9NXH8 423 aa24.91■■□□□ 1.58
UPF3A-209ENST00000492270 HS3ST3A1Q9Y663 406 aa24.91■■□□□ 1.58
UPF3A-209ENST00000492270 FRYQ5TBA9 3013 aa24.91■■□□□ 1.58
UPF3A-209ENST00000492270 TPRP12270 2363 aaKnown RBP24.91■■□□□ 1.58
UPF3A-209ENST00000492270 ACACBO00763 2458 aa24.91■■□□□ 1.58
UPF3A-209ENST00000492270 PLXNB3Q9ULL4 1909 aa24.9■■□□□ 1.58
UPF3A-209ENST00000492270 YKT6O15498 198 aa24.9■■□□□ 1.58
UPF3A-209ENST00000492270 ATXN1LP0C7T5 689 aaKnown RBP24.9■■□□□ 1.58
UPF3A-209ENST00000492270 SERPINA4P29622 427 aa24.9■■□□□ 1.58
UPF3A-209ENST00000492270 NSUN2Q08J23 767 aaKnown RBP eCLIP24.9■■□□□ 1.58
UPF3A-209ENST00000492270 PAFAH1B3Q15102 231 aaKnown RBP24.9■■□□□ 1.58
UPF3A-209ENST00000492270 ZFYVE27Q5T4F4 411 aa24.9■■□□□ 1.58
UPF3A-209ENST00000492270 CFAP58Q5T655 872 aa24.9■■□□□ 1.58
UPF3A-209ENST00000492270 KYAT3Q6YP21 454 aaKnown RBP24.9■■□□□ 1.58
UPF3A-209ENST00000492270 KANSL1Q7Z3B3 1105 aa24.9■■□□□ 1.58
UPF3A-209ENST00000492270 ZSCAN30Q86W11 494 aa24.9■■□□□ 1.58
UPF3A-209ENST00000492270 CHCHD4Q8N4Q1 142 aa24.9■■□□□ 1.58
UPF3A-209ENST00000492270 HCAR2Q8TDS4 363 aa24.9■■□□□ 1.58
UPF3A-209ENST00000492270 RAPGEF5Q92565 580 aa24.9■■□□□ 1.58
UPF3A-209ENST00000492270 MRFAP1L1Q96HT8 127 aa24.9■■□□□ 1.58
UPF3A-209ENST00000492270 CDC6Q99741 560 aa24.9■■□□□ 1.58
UPF3A-209ENST00000492270 GPR27Q9NS67 375 aa24.9■■□□□ 1.58
UPF3A-209ENST00000492270 COQ6Q9Y2Z9 468 aa24.9■■□□□ 1.58
UPF3A-209ENST00000492270 GOLGA8CPA6NN73 597 aa24.89■■□□□ 1.58
UPF3A-209ENST00000492270 RENBPP51606 427 aa24.89■■□□□ 1.58
UPF3A-209ENST00000492270 BCL2L1Q07817 233 aa24.89■■□□□ 1.58
UPF3A-209ENST00000492270 ELP6Q0PNE2 266 aa24.89■■□□□ 1.58
UPF3A-209ENST00000492270 TMEM52BQ4KMG9 183 aa24.89■■□□□ 1.58
UPF3A-209ENST00000492270 TPRG1LQ5T0D9 272 aa24.89■■□□□ 1.58
UPF3A-209ENST00000492270 BRAT1Q6PJG6 821 aa24.89■■□□□ 1.58
UPF3A-209ENST00000492270 EID2Q8N6I1 236 aa24.89■■□□□ 1.58
UPF3A-209ENST00000492270 PQLC3Q8N755 202 aa24.89■■□□□ 1.58
UPF3A-209ENST00000492270 ASB12Q8WXK4 309 aa24.89■■□□□ 1.58
UPF3A-209ENST00000492270 FAF2Q96CS3 445 aa24.89■■□□□ 1.58
UPF3A-209ENST00000492270 LENG8Q96PV6 779 aaPredicted RBP24.89■■□□□ 1.58
UPF3A-209ENST00000492270 KLK13Q9UKR3 277 aa24.89■■□□□ 1.58
UPF3A-209ENST00000492270 INTUQ9ULD6 942 aa24.89■■□□□ 1.58
UPF3A-209ENST00000492270 TFR2Q9UP52 801 aa24.89■■□□□ 1.58
UPF3A-209ENST00000492270 HYOU1Q9Y4L1 999 aa24.89■■□□□ 1.58
UPF3A-209ENST00000492270 LRP4O75096 1905 aa24.88■■□□□ 1.57
UPF3A-209ENST00000492270 TRAFD1O14545 582 aaPredicted RBP24.88■■□□□ 1.57
UPF3A-209ENST00000492270 RIOK3O14730 519 aaKnown RBP24.88■■□□□ 1.57
UPF3A-209ENST00000492270 TM7SF2O76062 418 aa24.88■■□□□ 1.57
UPF3A-209ENST00000492270 CR2P20023 1033 aa24.88■■□□□ 1.57
UPF3A-209ENST00000492270 KDELR1P24390 212 aa24.88■■□□□ 1.57
UPF3A-209ENST00000492270 IGFALSP35858 605 aa24.88■■□□□ 1.57
UPF3A-209ENST00000492270 MMP12P39900 470 aa24.88■■□□□ 1.57
UPF3A-209ENST00000492270 ARHGAP25P42331 645 aa24.88■■□□□ 1.57
UPF3A-209ENST00000492270 MAXP61244 160 aa24.88■■□□□ 1.57
UPF3A-209ENST00000492270 AP1S1P61966 158 aa24.88■■□□□ 1.57
UPF3A-209ENST00000492270 GALNT2Q10471 571 aa24.88■■□□□ 1.57
UPF3A-209ENST00000492270 INAVAQ3KP66 663 aa24.88■■□□□ 1.57
UPF3A-209ENST00000492270 LRRN4Q8WUT4 740 aa24.88■■□□□ 1.57
UPF3A-209ENST00000492270 CENPTQ96BT3 561 aa24.88■■□□□ 1.57
UPF3A-209ENST00000492270 ECHDC3Q96DC8 303 aa24.88■■□□□ 1.57
UPF3A-209ENST00000492270 FTSJ1Q9UET6 329 aa24.88■■□□□ 1.57
UPF3A-209ENST00000492270 MAP1BP46821 2468 aaKnown RBP24.88■■□□□ 1.57
UPF3A-209ENST00000492270 FPGTO14772 594 aa24.87■■□□□ 1.57
UPF3A-209ENST00000492270 GARSP41250 739 aaKnown RBP24.87■■□□□ 1.57
UPF3A-209ENST00000492270 MMP13P45452 471 aa24.87■■□□□ 1.57
UPF3A-209ENST00000492270 SUOXP51687 545 aa24.87■■□□□ 1.57
UPF3A-209ENST00000492270 ZNF542PQ5EBM4 170 aa24.87■■□□□ 1.57
UPF3A-209ENST00000492270 RAB44Q7Z6P3 723 aaPredicted RBP24.87■■□□□ 1.57
UPF3A-209ENST00000492270 MAP7D3Q8IWC1 876 aa24.87■■□□□ 1.57
UPF3A-209ENST00000492270 TP53I13Q8NBR0 393 aaPredicted RBP24.87■■□□□ 1.57
UPF3A-209ENST00000492270 DENND6BQ8NEG7 585 aa24.87■■□□□ 1.57
UPF3A-209ENST00000492270 MGME1Q9BQP7 344 aa24.87■■□□□ 1.57
UPF3A-209ENST00000492270 MBNL1Q9NR56 388 aaKnown RBP24.87■■□□□ 1.57
UPF3A-209ENST00000492270 APOBEC2Q9Y235 224 aaKnown RBP24.87■■□□□ 1.57
UPF3A-209ENST00000492270 ATP8A1Q9Y2Q0 1164 aa24.87■■□□□ 1.57
UPF3A-209ENST00000492270 LRRD1A4D1F6 860 aa24.86■■□□□ 1.57
UPF3A-209ENST00000492270 TNFSF14O43557 240 aa24.86■■□□□ 1.57
UPF3A-209ENST00000492270 TRIM16O95361 564 aa24.86■■□□□ 1.57
UPF3A-209ENST00000492270 C6P13671 934 aa24.86■■□□□ 1.57
UPF3A-209ENST00000492270 HSPA9P38646 679 aaKnown RBP24.86■■□□□ 1.57
UPF3A-209ENST00000492270 MAGEA1P43355 309 aa24.86■■□□□ 1.57
UPF3A-209ENST00000492270 GBE1Q04446 702 aa24.86■■□□□ 1.57
UPF3A-209ENST00000492270 FZD2Q14332 565 aa24.86■■□□□ 1.57
UPF3A-209ENST00000492270 TCEAL1Q15170 157 aa24.86■■□□□ 1.57
UPF3A-209ENST00000492270 MARC1Q5VT66 337 aa24.86■■□□□ 1.57
UPF3A-209ENST00000492270 ERAP2Q6P179 960 aa24.86■■□□□ 1.57
UPF3A-209ENST00000492270 PAF1Q8N7H5 531 aa24.86■■□□□ 1.57
UPF3A-209ENST00000492270 FAM174AQ8TBP5 190 aa24.86■■□□□ 1.57
UPF3A-209ENST00000492270 NSMCE1Q8WV22 266 aa24.86■■□□□ 1.57
UPF3A-209ENST00000492270 ADAMTS14Q8WXS8 1223 aa24.86■■□□□ 1.57
UPF3A-209ENST00000492270 NUDCD1Q96RS6 583 aa24.86■■□□□ 1.57
UPF3A-209ENST00000492270 NOD2Q9HC29 1040 aa24.86■■□□□ 1.57
UPF3A-209ENST00000492270 SCUBE2Q9NQ36 999 aa24.86■■□□□ 1.57
UPF3A-209ENST00000492270 UCKL1Q9NWZ5 548 aa24.86■■□□□ 1.57
UPF3A-209ENST00000492270 PCDHGC4Q9Y5F7 938 aa24.86■■□□□ 1.57
UPF3A-209ENST00000492270 C3orf70A6NLC5 250 aaPredicted RBP24.85■■□□□ 1.57
UPF3A-209ENST00000492270 LCA5LO95447 670 aa24.85■■□□□ 1.57
UPF3A-209ENST00000492270 TNNT1P13805 278 aa24.85■■□□□ 1.57
UPF3A-209ENST00000492270 RABIFP47224 123 aa24.85■■□□□ 1.57
UPF3A-209ENST00000492270 LIG3P49916 1009 aa24.85■■□□□ 1.57
UPF3A-209ENST00000492270 PFN3P60673 137 aa24.85■■□□□ 1.57
UPF3A-209ENST00000492270 SLC10A2Q12908 348 aaPredicted RBP24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms