RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 TBC1D25Q3MII6 688 aa8.85□□□□□ -0.99
NUP50-217ENST00000491860 ERMARDQ5T6L9 678 aa8.85□□□□□ -0.99
NUP50-217ENST00000491860 CDCP2Q5VXM1 449 aa8.85□□□□□ -0.99
NUP50-217ENST00000491860 PLEKHA7Q6IQ23 1121 aa8.85□□□□□ -0.99
NUP50-217ENST00000491860 ESRP1Q6NXG1 681 aaKnown RBP8.85□□□□□ -0.99
NUP50-217ENST00000491860 LVRNQ6Q4G3 990 aa8.85□□□□□ -0.99
NUP50-217ENST00000491860 IGF2-ASQ6U949 168 aa8.85□□□□□ -0.99
NUP50-217ENST00000491860 MACC1Q6ZN28 852 aa8.85□□□□□ -0.99
NUP50-217ENST00000491860 APTXQ7Z2E3 356 aaKnown RBP8.85□□□□□ -0.99
NUP50-217ENST00000491860 IRF2BP2Q7Z5L9 587 aa8.85□□□□□ -0.99
NUP50-217ENST00000491860 PHLDB2Q86SQ0 1253 aa8.85□□□□□ -0.99
NUP50-217ENST00000491860 VPS36Q86VN1 386 aa8.85□□□□□ -0.99
NUP50-217ENST00000491860 OR6C4Q8NGE1 309 aa8.85□□□□□ -0.99
NUP50-217ENST00000491860 OR6K2Q8NGY2 324 aa8.85□□□□□ -0.99
NUP50-217ENST00000491860 MAPK15Q8TD08 544 aa8.85□□□□□ -0.99
NUP50-217ENST00000491860 CENPTQ96BT3 561 aa8.85□□□□□ -0.99
NUP50-217ENST00000491860 IQCDQ96DY2 449 aa8.85□□□□□ -0.99
NUP50-217ENST00000491860 CCDC97Q96F63 343 aaPredicted RBP8.85□□□□□ -0.99
NUP50-217ENST00000491860 HMCESQ96FZ2 354 aa8.85□□□□□ -0.99
NUP50-217ENST00000491860 CRELD1Q96HD1 420 aa8.85□□□□□ -0.99
NUP50-217ENST00000491860 SUV39H2Q9H5I1 410 aa8.85□□□□□ -0.99
NUP50-217ENST00000491860 ZWILCHQ9H900 591 aa8.85□□□□□ -0.99
NUP50-217ENST00000491860 RTN4Q9NQC3 1192 aaKnown RBP8.85□□□□□ -0.99
NUP50-217ENST00000491860 UCKL1Q9NWZ5 548 aa8.85□□□□□ -0.99
NUP50-217ENST00000491860 APOBEC3BQ9UH17 382 aaKnown RBP8.85□□□□□ -0.99
NUP50-217ENST00000491860 DOLKQ9UPQ8 538 aa8.85□□□□□ -0.99
NUP50-217ENST00000491860 BZW2Q9Y6E2 419 aaKnown RBP8.85□□□□□ -0.99
NUP50-217ENST00000491860 EME2A4GXA9 379 aaPredicted RBP8.84□□□□□ -0.99
NUP50-217ENST00000491860 CAPN8A6NHC0 703 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 TMX2-CTNND1H3BSU7 103 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 RAD51BO15315 384 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 BRINP1O60477 761 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 PRAMEF11O60813 436 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 PALMO75781 387 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 GJB6O95452 261 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 PRB1P04280 392 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 ANXA6P08133 673 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 KELP23276 732 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 HSPA9P38646 679 aaKnown RBP8.84□□□□□ -0.99
NUP50-217ENST00000491860 PRKCIP41743 596 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 LSSP48449 732 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 PCBP4P57723 403 aaKnown RBP8.84□□□□□ -0.99
NUP50-217ENST00000491860 RPL7AP62424 266 aaKnown RBP8.84□□□□□ -0.99
NUP50-217ENST00000491860 TYRO3Q06418 890 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 MAMLD1Q13495 774 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 UGP2Q16851 508 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 RAB6CQ53S08 254 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 ATXN7L2Q5T6C5 722 aaPredicted RBP8.84□□□□□ -0.99
NUP50-217ENST00000491860 FAXCQ5TGI0 409 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 BROXQ5VW32 411 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 KDM7AQ6ZMT4 941 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 PHACTR4Q8IZ21 702 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 PYROXD2Q8N2H3 581 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 BBS5Q8N3I7 341 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 AOPEPQ8N6M6 819 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 ZNF248Q8NDW4 579 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 IFI44Q8TCB0 444 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 LMX1AQ8TE12 382 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 ZNF599Q96NL3 588 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 DCBLD2Q96PD2 775 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 CINPQ9BW66 212 aaPredicted RBP8.84□□□□□ -0.99
NUP50-217ENST00000491860 BOCQ9BWV1 1114 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 RAB6CQ9H0N0 254 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 NOL6Q9H6R4 1146 aaKnown RBP8.84□□□□□ -0.99
NUP50-217ENST00000491860 LRRC19Q9H756 370 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 POLR1BQ9H9Y6 1135 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 SP110Q9HB58 689 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 THSD1Q9NS62 852 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 HAUS2Q9NVX0 235 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 AIPL1Q9NZN9 384 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 AP4E1Q9UPM8 1137 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 RAI2Q9Y5P3 530 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 ASXL3Q9C0F0 2248 aa8.84□□□□□ -0.99
NUP50-217ENST00000491860 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.83□□□□□ -1
NUP50-217ENST00000491860 FAM170AA1A519 330 aa8.83□□□□□ -1
NUP50-217ENST00000491860 TMEM191CA6NGB0 347 aa8.83□□□□□ -1
NUP50-217ENST00000491860 RNF103O00237 685 aa8.83□□□□□ -1
NUP50-217ENST00000491860 PDE2AO00408 941 aaPredicted RBP8.83□□□□□ -1
NUP50-217ENST00000491860 ZW10O43264 779 aa8.83□□□□□ -1
NUP50-217ENST00000491860 MMP20O60882 483 aa8.83□□□□□ -1
NUP50-217ENST00000491860 RASGRP1O95267 797 aa8.83□□□□□ -1
NUP50-217ENST00000491860 GIMD1P0DJR0 217 aa8.83□□□□□ -1
NUP50-217ENST00000491860 KRT10P13645 584 aa8.83□□□□□ -1
NUP50-217ENST00000491860 CTSEP14091 401 aa8.83□□□□□ -1
NUP50-217ENST00000491860 TIMP2P16035 220 aa8.83□□□□□ -1
NUP50-217ENST00000491860 GKP32189 559 aa8.83□□□□□ -1
NUP50-217ENST00000491860 SERPINB6P35237 376 aa8.83□□□□□ -1
NUP50-217ENST00000491860 PCK1P35558 622 aa8.83□□□□□ -1
NUP50-217ENST00000491860 IGFALSP35858 605 aa8.83□□□□□ -1
NUP50-217ENST00000491860 EIF4A3P38919 411 aaKnown RBP8.83□□□□□ -1
NUP50-217ENST00000491860 ARL4AP40617 200 aa8.83□□□□□ -1
NUP50-217ENST00000491860 AP1S1P61966 158 aa8.83□□□□□ -1
NUP50-217ENST00000491860 BCL2L1Q07817 233 aa8.83□□□□□ -1
NUP50-217ENST00000491860 IL10RBQ08334 325 aa8.83□□□□□ -1
NUP50-217ENST00000491860 KLHL30Q0D2K2 578 aa8.83□□□□□ -1
NUP50-217ENST00000491860 EIF3IQ13347 325 aaKnown RBP8.83□□□□□ -1
NUP50-217ENST00000491860 MTM1Q13496 603 aa8.83□□□□□ -1
NUP50-217ENST00000491860 PEX6Q13608 980 aa8.83□□□□□ -1
NUP50-217ENST00000491860 CYTH1Q15438 398 aa8.83□□□□□ -1
NUP50-217ENST00000491860 TSR1Q2NL82 804 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms