RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 POM121BA6NF01 834 aa16.72■□□□□ 0.27
PDLIM2-217ENST00000491330 J3KR12 359 aa16.72■□□□□ 0.27
PDLIM2-217ENST00000491330 PDE2AO00408 941 aaPredicted RBP16.72■□□□□ 0.27
PDLIM2-217ENST00000491330 AQP9O43315 295 aa16.72■□□□□ 0.27
PDLIM2-217ENST00000491330 GYPCP04921 128 aa16.72■□□□□ 0.27
PDLIM2-217ENST00000491330 GP1BAP07359 652 aa16.72■□□□□ 0.27
PDLIM2-217ENST00000491330 ANXA6P08133 673 aa16.72■□□□□ 0.27
PDLIM2-217ENST00000491330 CTSEP14091 401 aa16.72■□□□□ 0.27
PDLIM2-217ENST00000491330 TIMP2P16035 220 aa16.72■□□□□ 0.27
PDLIM2-217ENST00000491330 KELP23276 732 aa16.72■□□□□ 0.27
PDLIM2-217ENST00000491330 PPARDQ03181 441 aa16.72■□□□□ 0.27
PDLIM2-217ENST00000491330 PROX2Q3B8N5 592 aa16.72■□□□□ 0.27
PDLIM2-217ENST00000491330 TMEM52BQ4KMG9 183 aa16.72■□□□□ 0.27
PDLIM2-217ENST00000491330 HES3Q5TGS1 186 aa16.72■□□□□ 0.27
PDLIM2-217ENST00000491330 HGSNATQ68CP4 663 aa16.72■□□□□ 0.27
PDLIM2-217ENST00000491330 ESRP1Q6NXG1 681 aaKnown RBP16.72■□□□□ 0.27
PDLIM2-217ENST00000491330 ALKBH5Q6P6C2 394 aaKnown RBP16.72■□□□□ 0.27
PDLIM2-217ENST00000491330 LRRC69Q6ZNQ3 347 aa16.72■□□□□ 0.27
PDLIM2-217ENST00000491330 TPCN2Q8NHX9 752 aa16.72■□□□□ 0.27
PDLIM2-217ENST00000491330 LMX1AQ8TE12 382 aa16.72■□□□□ 0.27
PDLIM2-217ENST00000491330 TEKT4Q8WW24 435 aa16.72■□□□□ 0.27
PDLIM2-217ENST00000491330 CTNNBL1Q8WYA6 563 aaPredicted RBP16.72■□□□□ 0.27
PDLIM2-217ENST00000491330 TBATAQ96M53 351 aa16.72■□□□□ 0.27
PDLIM2-217ENST00000491330 WRAP53Q9BUR4 548 aaKnown RBP16.72■□□□□ 0.27
PDLIM2-217ENST00000491330 LHX3Q9UBR4 397 aa16.72■□□□□ 0.27
PDLIM2-217ENST00000491330 SALL4Q9UJQ4 1053 aa16.72■□□□□ 0.27
PDLIM2-217ENST00000491330 ANAPC7Q9UJX3 599 aa16.72■□□□□ 0.27
PDLIM2-217ENST00000491330 ITM2BQ9Y287 266 aa16.72■□□□□ 0.27
PDLIM2-217ENST00000491330 SSU72P8A0A1W2PR75 194 aa16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 CFAP69A5D8W1 941 aa16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 FAM149AA5PLN7 773 aa16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 TPP1O14773 563 aa16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 RRP8O43159 456 aaKnown RBP16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 ALPIP09923 528 aa16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 CKMT1AP12532 417 aa16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 EIF4A3P38919 411 aaKnown RBP16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 SCNN1BP51168 640 aa16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 PFN3P60673 137 aa16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 CYP4F3Q08477 520 aa16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 FZD2Q14332 565 aa16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 LBRQ14739 615 aaKnown RBP16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 ELOCQ15369 112 aa16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 DPYSL2Q16555 572 aa16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 ODF2Q5BJF6 829 aa16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 ZNF542PQ5EBM4 170 aa16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 E4F1Q66K89 784 aaPredicted RBP16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 SDR16C5Q8N3Y7 309 aa16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 FSTL5Q8N475 847 aaPredicted RBP16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 FAM181AQ8N9Y4 354 aa16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 OR8K1Q8NGG5 319 aa16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 CENPTQ96BT3 561 aa16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 NUP85Q9BW27 656 aa16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 NRSN2Q9GZP1 204 aa16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 KLC2Q9H0B6 622 aa16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 PDFQ9HBH1 243 aa16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 CWC15Q9P013 229 aaKnown RBP16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 CTTNBP2NLQ9P2B4 639 aa16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 RCOR3Q9P2K3 495 aaPredicted RBP16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 APOBEC3BQ9UH17 382 aaKnown RBP16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 ATP8A1Q9Y2Q0 1164 aa16.71■□□□□ 0.27
PDLIM2-217ENST00000491330 RNF103O00237 685 aa16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 CACNB4O00305 520 aaPredicted RBP16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 TRIM38O00635 465 aa16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 PIGNO95427 931 aa16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 H2AFZP0C0S5 128 aa16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 ELFN1P0C7U0 828 aa16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 CDH6P55285 790 aa16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 TARDBPQ13148 414 aaKnown RBP eCLIP16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 FGL2Q14314 439 aa16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 CA9Q16790 459 aa16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 RALGPS1Q5JS13 557 aa16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 SARM1Q6SZW1 724 aa16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 MACC1Q6ZN28 852 aa16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 H2AFVQ71UI9 128 aa16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 KANSL1Q7Z3B3 1105 aa16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 CAMK1DQ8IU85 385 aa16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 SLC22A18ASQ8N1D0 253 aa16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 ATPAF2Q8N5M1 289 aa16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 NIPA2Q8N8Q9 360 aa16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 TSEN2Q8NCE0 465 aaKnown RBP16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 ZNF548Q8NEK5 533 aaPredicted RBP16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 WDR48Q8TAF3 677 aa16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 MDM1Q8TC05 714 aa16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 APOLD1Q96LR9 279 aa16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 DEPDC7Q96QD5 511 aa16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 PSKH2Q96QS6 385 aa16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 KLF6Q99612 283 aaPredicted RBP16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 DNAJC7Q99615 494 aa16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 THAP2Q9H0W7 228 aa16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 PCDH12Q9NPG4 1184 aa16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 UCKL1Q9NWZ5 548 aa16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 CEP295Q9C0D2 2601 aa16.7■□□□□ 0.26
PDLIM2-217ENST00000491330 TSPAN11A1L157 253 aa16.69■□□□□ 0.26
PDLIM2-217ENST00000491330 K7ESM1 405 aa16.69■□□□□ 0.26
PDLIM2-217ENST00000491330 RAD51BO15315 384 aa16.69■□□□□ 0.26
PDLIM2-217ENST00000491330 RASGRP1O95267 797 aa16.69■□□□□ 0.26
PDLIM2-217ENST00000491330 KRT7P08729 469 aa16.69■□□□□ 0.26
PDLIM2-217ENST00000491330 CA4P22748 312 aa16.69■□□□□ 0.26
PDLIM2-217ENST00000491330 CASP14P31944 242 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms