RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 LRFN5Q96NI6 719 aa4.03□□□□□ -1.76
PHC3-213ENST00000491258 ZNF224Q9NZL3 707 aa4.03□□□□□ -1.76
PHC3-213ENST00000491258 C19orf53Q9UNZ5 99 aaPredicted RBP4.03□□□□□ -1.76
PHC3-213ENST00000491258 ZNF711Q9Y462 761 aa4.03□□□□□ -1.76
PHC3-213ENST00000491258 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.03□□□□□ -1.76
PHC3-213ENST00000491258 PPRC1Q5VV67 1664 aaKnown RBP4.03□□□□□ -1.76
PHC3-213ENST00000491258 C9orf84Q5VXU9 1444 aa4.03□□□□□ -1.76
PHC3-213ENST00000491258 KIF13AQ9H1H9 1805 aa4.02□□□□□ -1.77
PHC3-213ENST00000491258 A0A0G2JPF8 293 aa4.02□□□□□ -1.77
PHC3-213ENST00000491258 OR6C68A6NDL8 312 aa4.02□□□□□ -1.77
PHC3-213ENST00000491258 HNRNPCL3B7ZW38 293 aa4.02□□□□□ -1.77
PHC3-213ENST00000491258 HNRNPCL1O60812 293 aaKnown RBP4.02□□□□□ -1.77
PHC3-213ENST00000491258 RNF224P0DH78 156 aa4.02□□□□□ -1.77
PHC3-213ENST00000491258 HNRNPCL4P0DMR1 293 aa4.02□□□□□ -1.77
PHC3-213ENST00000491258 FGF5P12034 268 aa4.02□□□□□ -1.77
PHC3-213ENST00000491258 ABCB4P21439 1286 aa4.02□□□□□ -1.77
PHC3-213ENST00000491258 SERPINA4P29622 427 aa4.02□□□□□ -1.77
PHC3-213ENST00000491258 SYT16Q17RD7 645 aa4.02□□□□□ -1.77
PHC3-213ENST00000491258 KRTAP7-1Q8IUC3 87 aa4.02□□□□□ -1.77
PHC3-213ENST00000491258 FMNL3Q8IVF7 1028 aa4.02□□□□□ -1.77
PHC3-213ENST00000491258 FAM71BQ8TC56 605 aa4.02□□□□□ -1.77
PHC3-213ENST00000491258 FIG4Q92562 907 aa4.02□□□□□ -1.77
PHC3-213ENST00000491258 ANKRD9Q96BM1 317 aaPredicted RBP4.02□□□□□ -1.77
PHC3-213ENST00000491258 MMTAG2Q9BU76 263 aaKnown RBP4.02□□□□□ -1.77
PHC3-213ENST00000491258 THAP1Q9NVV9 213 aa4.02□□□□□ -1.77
PHC3-213ENST00000491258 SLC9A2Q9UBY0 812 aa4.02□□□□□ -1.77
PHC3-213ENST00000491258 FBXO40Q9UH90 709 aa4.02□□□□□ -1.77
PHC3-213ENST00000491258 SIX4Q9UIU6 781 aa4.02□□□□□ -1.77
PHC3-213ENST00000491258 MORC2Q9Y6X9 1032 aaPredicted RBP4.02□□□□□ -1.77
PHC3-213ENST00000491258 COL2A1P02458 1487 aaPredicted RBP4.02□□□□□ -1.77
PHC3-213ENST00000491258 KIAA1107Q9UPP5 1409 aa4.02□□□□□ -1.77
PHC3-213ENST00000491258 ABCA9Q8IUA7 1624 aa4.02□□□□□ -1.77
PHC3-213ENST00000491258 CCNB3Q8WWL7 1395 aa4.02□□□□□ -1.77
PHC3-213ENST00000491258 ARHGEF12Q9NZN5 1544 aa4.01□□□□□ -1.77
PHC3-213ENST00000491258 ZNF518AQ6AHZ1 1483 aa4.01□□□□□ -1.77
PHC3-213ENST00000491258 MLH3Q9UHC1 1453 aa4.01□□□□□ -1.77
PHC3-213ENST00000491258 C17orf100A8MU93 164 aa4.01□□□□□ -1.77
PHC3-213ENST00000491258 SLC25A17O43808 307 aa4.01□□□□□ -1.77
PHC3-213ENST00000491258 CYP21A2P08686 494 aa4.01□□□□□ -1.77
PHC3-213ENST00000491258 TRIM27P14373 513 aa4.01□□□□□ -1.77
PHC3-213ENST00000491258 ARSAP15289 507 aa4.01□□□□□ -1.77
PHC3-213ENST00000491258 CHN1P15882 459 aa4.01□□□□□ -1.77
PHC3-213ENST00000491258 MARK3P27448 753 aa4.01□□□□□ -1.77
PHC3-213ENST00000491258 TIMP3P35625 211 aa4.01□□□□□ -1.77
PHC3-213ENST00000491258 FUT6P51993 359 aa4.01□□□□□ -1.77
PHC3-213ENST00000491258 ECT2LQ008S8 904 aa4.01□□□□□ -1.77
PHC3-213ENST00000491258 DCTN1Q14203 1278 aa4.01□□□□□ -1.77
PHC3-213ENST00000491258 SPARCL1Q14515 664 aa4.01□□□□□ -1.77
PHC3-213ENST00000491258 STARD3Q14849 445 aa4.01□□□□□ -1.77
PHC3-213ENST00000491258 RUNDC3AQ59EK9 446 aa4.01□□□□□ -1.77
PHC3-213ENST00000491258 DGAT2L7PQ6IED9 249 aa4.01□□□□□ -1.77
PHC3-213ENST00000491258 GGT6Q6P531 493 aa4.01□□□□□ -1.77
PHC3-213ENST00000491258 SLC9B2Q86UD5 537 aa4.01□□□□□ -1.77
PHC3-213ENST00000491258 PTGR2Q8N8N7 351 aaPredicted RBP4.01□□□□□ -1.77
PHC3-213ENST00000491258 MCPH1Q8NEM0 835 aa4.01□□□□□ -1.77
PHC3-213ENST00000491258 ARRDC2Q8TBH0 407 aa4.01□□□□□ -1.77
PHC3-213ENST00000491258 GRAPLQ8TC17 118 aaPredicted RBP4.01□□□□□ -1.77
PHC3-213ENST00000491258 C3orf49Q96BT1 292 aa4.01□□□□□ -1.77
PHC3-213ENST00000491258 FBRSL1Q9HCM7 1045 aaKnown RBP4.01□□□□□ -1.77
PHC3-213ENST00000491258 NOX4Q9NPH5 578 aa4.01□□□□□ -1.77
PHC3-213ENST00000491258 NLKQ9UBE8 527 aa4.01□□□□□ -1.77
PHC3-213ENST00000491258 SLCO3A1Q9UIG8 710 aa4.01□□□□□ -1.77
PHC3-213ENST00000491258 RAPGEF6Q8TEU7 1601 aa4.01□□□□□ -1.77
PHC3-213ENST00000491258 MTUS2Q5JR59 1369 aa4.01□□□□□ -1.77
PHC3-213ENST00000491258 GPATCH8Q9UKJ3 1502 aaKnown RBP4□□□□□ -1.77
PHC3-213ENST00000491258 KIF21BO75037 1637 aa4□□□□□ -1.77
PHC3-213ENST00000491258 ACTL6BO94805 426 aa4□□□□□ -1.77
PHC3-213ENST00000491258 ITGA2BP08514 1039 aa4□□□□□ -1.77
PHC3-213ENST00000491258 KRT5P13647 590 aa4□□□□□ -1.77
PHC3-213ENST00000491258 ACP5P13686 325 aa4□□□□□ -1.77
PHC3-213ENST00000491258 CTPS1P17812 591 aa4□□□□□ -1.77
PHC3-213ENST00000491258 PMP22Q01453 160 aa4□□□□□ -1.77
PHC3-213ENST00000491258 ZNF155Q12901 538 aaPredicted RBP4□□□□□ -1.77
PHC3-213ENST00000491258 PDCLQ13371 301 aa4□□□□□ -1.77
PHC3-213ENST00000491258 ME3Q16798 604 aa4□□□□□ -1.77
PHC3-213ENST00000491258 AP5B1Q2VPB7 878 aa4□□□□□ -1.77
PHC3-213ENST00000491258 TTC22Q5TAA0 569 aa4□□□□□ -1.77
PHC3-213ENST00000491258 SHFQ7M4L6 423 aa4□□□□□ -1.77
PHC3-213ENST00000491258 MON1AQ86VX9 555 aa4□□□□□ -1.77
PHC3-213ENST00000491258 DENND6AQ8IWF6 608 aa4□□□□□ -1.77
PHC3-213ENST00000491258 DMBX1Q8NFW5 382 aa4□□□□□ -1.77
PHC3-213ENST00000491258 PJA1Q8NG27 643 aa4□□□□□ -1.77
PHC3-213ENST00000491258 LNX1Q8TBB1 728 aaPredicted RBP4□□□□□ -1.77
PHC3-213ENST00000491258 OTUD7AQ8TE49 926 aaPredicted RBP4□□□□□ -1.77
PHC3-213ENST00000491258 ZNF501Q96CX3 271 aaPredicted RBP4□□□□□ -1.77
PHC3-213ENST00000491258 BARHL1Q9BZE3 327 aa4□□□□□ -1.77
PHC3-213ENST00000491258 NDUFAF4Q9P032 175 aa4□□□□□ -1.77
PHC3-213ENST00000491258 KCNS2Q9ULS6 477 aa4□□□□□ -1.77
PHC3-213ENST00000491258 SMAD5-AS1Q9Y6J3 95 aa4□□□□□ -1.77
PHC3-213ENST00000491258 DHX29Q7Z478 1369 aaKnown RBP4□□□□□ -1.77
PHC3-213ENST00000491258 ZFYVE16Q7Z3T8 1539 aa4□□□□□ -1.77
PHC3-213ENST00000491258 FRMPD1Q5SYB0 1578 aa3.99□□□□□ -1.77
PHC3-213ENST00000491258 CPED1A4D0V7 1026 aa3.99□□□□□ -1.77
PHC3-213ENST00000491258 TIPRLO75663 272 aa3.99□□□□□ -1.77
PHC3-213ENST00000491258 TSPY4P0CV99 314 aa3.99□□□□□ -1.77
PHC3-213ENST00000491258 TSPY10P0CW01 314 aa3.99□□□□□ -1.77
PHC3-213ENST00000491258 TFPIP10646 304 aa3.99□□□□□ -1.77
PHC3-213ENST00000491258 MCM3P25205 808 aa3.99□□□□□ -1.77
PHC3-213ENST00000491258 TECP42680 631 aa3.99□□□□□ -1.77
PHC3-213ENST00000491258 PTPN9P43378 593 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms