RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	SEMA3C	Q99985	751 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	KDM4C	Q9H3R0	1056 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	ATP13A3	Q9H7F0	1226 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	CAAP1	Q9H8G2	361 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	C10orf88	Q9H8K7	445 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	IL21R	Q9HBE5	538 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	RBM22	Q9NW64	420 aa	Known RBP eCLIP	18.75	■□□□□ 0.59
C4A-256	ENST00000490663	CDV3	Q9UKY7	258 aa	Known RBP	18.75	■□□□□ 0.59
C4A-256	ENST00000490663	COQ6	Q9Y2Z9	468 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	18.75	■□□□□ 0.59
C4A-256	ENST00000490663	DNAH14	Q0VDD8	3507 aa		18.75	■□□□□ 0.59
C4A-256	ENST00000490663	IGLON5	A6NGN9	336 aa		18.74	■□□□□ 0.59
C4A-256	ENST00000490663		A8MX80	341 aa		18.74	■□□□□ 0.59
C4A-256	ENST00000490663	UPK3BL1	B0FP48	263 aa		18.74	■□□□□ 0.59
C4A-256	ENST00000490663	UPK3BL2	E5RIL1	263 aa		18.74	■□□□□ 0.59
C4A-256	ENST00000490663		H0Y8X5	98 aa		18.74	■□□□□ 0.59
C4A-256	ENST00000490663	ARHGAP33	O14559	1287 aa		18.74	■□□□□ 0.59
C4A-256	ENST00000490663	JCHAIN	P01591	159 aa		18.74	■□□□□ 0.59
C4A-256	ENST00000490663	CCNB1	P14635	433 aa		18.74	■□□□□ 0.59
C4A-256	ENST00000490663	MX2	P20592	715 aa		18.74	■□□□□ 0.59
C4A-256	ENST00000490663	XPA	P23025	273 aa	Predicted RBP	18.74	■□□□□ 0.59
C4A-256	ENST00000490663	CSNK1D	P48730	415 aa		18.74	■□□□□ 0.59
C4A-256	ENST00000490663	PEX5	P50542	639 aa		18.74	■□□□□ 0.59
C4A-256	ENST00000490663	RENBP	P51606	427 aa		18.74	■□□□□ 0.59
C4A-256	ENST00000490663	CLDN2	P57739	230 aa		18.74	■□□□□ 0.59
C4A-256	ENST00000490663	TMEM259	Q4ZIN3	620 aa		18.74	■□□□□ 0.59
C4A-256	ENST00000490663	TIGD7	Q6NT04	549 aa	Predicted RBP	18.74	■□□□□ 0.59
C4A-256	ENST00000490663	ADAT2	Q7Z6V5	191 aa	Known RBP	18.74	■□□□□ 0.59
C4A-256	ENST00000490663	ZC3H18	Q86VM9	953 aa	Known RBP	18.74	■□□□□ 0.59
C4A-256	ENST00000490663	BBS5	Q8N3I7	341 aa		18.74	■□□□□ 0.59
C4A-256	ENST00000490663	TXLNB	Q8N3L3	684 aa		18.74	■□□□□ 0.59
C4A-256	ENST00000490663	MINDY1	Q8N5J2	469 aa		18.74	■□□□□ 0.59
C4A-256	ENST00000490663	TEX26	Q8N6G2	289 aa		18.74	■□□□□ 0.59
C4A-256	ENST00000490663	SMIM14	Q96QK8	99 aa		18.74	■□□□□ 0.59
C4A-256	ENST00000490663	PCDH12	Q9NPG4	1184 aa		18.74	■□□□□ 0.59
C4A-256	ENST00000490663	TMEM9B	Q9NQ34	198 aa		18.74	■□□□□ 0.59
C4A-256	ENST00000490663	SNX11	Q9Y5W9	270 aa		18.74	■□□□□ 0.59
C4A-256	ENST00000490663	PLXNB3	Q9ULL4	1909 aa		18.74	■□□□□ 0.59
C4A-256	ENST00000490663	TSPAN11	A1L157	253 aa		18.73	■□□□□ 0.59
C4A-256	ENST00000490663	CCDC66	A2RUB6	948 aa		18.73	■□□□□ 0.59
C4A-256	ENST00000490663	GOLGA8CP	A6NN73	597 aa		18.73	■□□□□ 0.59
C4A-256	ENST00000490663		F5H423	210 aa	Predicted RBP	18.73	■□□□□ 0.59
C4A-256	ENST00000490663	AREL1	O15033	823 aa		18.73	■□□□□ 0.59
C4A-256	ENST00000490663	RAD51B	O15315	384 aa		18.73	■□□□□ 0.59
C4A-256	ENST00000490663	DDX3Y	O15523	660 aa	Known RBP	18.73	■□□□□ 0.59
C4A-256	ENST00000490663	MMP20	O60882	483 aa		18.73	■□□□□ 0.59
C4A-256	ENST00000490663	NEBL	O76041	1014 aa		18.73	■□□□□ 0.59
C4A-256	ENST00000490663	CCDC175	P0C221	793 aa		18.73	■□□□□ 0.59
C4A-256	ENST00000490663	PYGM	P11217	842 aa		18.73	■□□□□ 0.59
C4A-256	ENST00000490663	ZFX	P17010	805 aa	Predicted RBP	18.73	■□□□□ 0.59
C4A-256	ENST00000490663	AFF3	P51826	1226 aa	Known RBP	18.73	■□□□□ 0.59
C4A-256	ENST00000490663	AP1S1	P61966	158 aa		18.73	■□□□□ 0.59
C4A-256	ENST00000490663	NSUN2	Q08J23	767 aa	Known RBP eCLIP	18.73	■□□□□ 0.59
C4A-256	ENST00000490663	NIPAL4	Q0D2K0	466 aa		18.73	■□□□□ 0.59
C4A-256	ENST00000490663	TFDP2	Q14188	446 aa		18.73	■□□□□ 0.59
C4A-256	ENST00000490663	KIF19	Q2TAC6	998 aa		18.73	■□□□□ 0.59
C4A-256	ENST00000490663	SETMAR	Q53H47	684 aa	Predicted RBP	18.73	■□□□□ 0.59
C4A-256	ENST00000490663	PRAMEF14	Q5SWL7	426 aa		18.73	■□□□□ 0.59
C4A-256	ENST00000490663	NAPEPLD	Q6IQ20	393 aa		18.73	■□□□□ 0.59
C4A-256	ENST00000490663	RABEPK	Q7Z6M1	372 aa		18.73	■□□□□ 0.59
C4A-256	ENST00000490663	NETO1	Q8TDF5	533 aa		18.73	■□□□□ 0.59
C4A-256	ENST00000490663	TUBGCP5	Q96RT8	1024 aa		18.73	■□□□□ 0.59
C4A-256	ENST00000490663	KCNF1	Q9H3M0	494 aa		18.73	■□□□□ 0.59
C4A-256	ENST00000490663	DKK3	Q9UBP4	350 aa		18.73	■□□□□ 0.59
C4A-256	ENST00000490663	ZNF106	Q9H2Y7	1883 aa	Known RBP	18.73	■□□□□ 0.59
C4A-256	ENST00000490663		A0A0U1RQS6	177 aa		18.72	■□□□□ 0.59
C4A-256	ENST00000490663	DCDC2B	A2VCK2	349 aa		18.72	■□□□□ 0.59
C4A-256	ENST00000490663	TRAFD1	O14545	582 aa	Predicted RBP	18.72	■□□□□ 0.59
C4A-256	ENST00000490663	AP1G1	O43747	822 aa		18.72	■□□□□ 0.59
C4A-256	ENST00000490663	KRT86	O43790	486 aa		18.72	■□□□□ 0.59
C4A-256	ENST00000490663	PTMA	P06454	111 aa	Known RBP	18.72	■□□□□ 0.59
C4A-256	ENST00000490663	TGM2	P21980	687 aa		18.72	■□□□□ 0.59
C4A-256	ENST00000490663	KCNA4	P22459	653 aa		18.72	■□□□□ 0.59
C4A-256	ENST00000490663	HSPA9	P38646	679 aa	Known RBP	18.72	■□□□□ 0.59
C4A-256	ENST00000490663	ATXN3	P54252	364 aa	Predicted RBP	18.72	■□□□□ 0.59
C4A-256	ENST00000490663	RWDD2B	P57060	319 aa		18.72	■□□□□ 0.59
C4A-256	ENST00000490663	IL9R	Q01113	521 aa		18.72	■□□□□ 0.59
C4A-256	ENST00000490663	CCDC15	Q0P6D6	951 aa		18.72	■□□□□ 0.59
C4A-256	ENST00000490663	HNRNPD	Q14103	355 aa	Known RBP	18.72	■□□□□ 0.59
C4A-256	ENST00000490663	PDK1	Q15118	436 aa		18.72	■□□□□ 0.59
C4A-256	ENST00000490663	PPP2R5E	Q16537	467 aa		18.72	■□□□□ 0.59
C4A-256	ENST00000490663	UGP2	Q16851	508 aa		18.72	■□□□□ 0.59
C4A-256	ENST00000490663	LRRC49	Q8IUZ0	686 aa		18.72	■□□□□ 0.59
C4A-256	ENST00000490663	CNTD1	Q8N815	330 aa		18.72	■□□□□ 0.59
C4A-256	ENST00000490663	CALR3	Q96L12	384 aa	Known RBP	18.72	■□□□□ 0.59
C4A-256	ENST00000490663	OSBPL8	Q9BZF1	889 aa		18.72	■□□□□ 0.59
C4A-256	ENST00000490663	TSGA10	Q9BZW7	698 aa		18.72	■□□□□ 0.59
C4A-256	ENST00000490663	ANKRD6	Q9Y2G4	727 aa		18.72	■□□□□ 0.59
C4A-256	ENST00000490663	PPP2R2C	Q9Y2T4	447 aa		18.72	■□□□□ 0.59
C4A-256	ENST00000490663	GOLGA4	Q13439	2230 aa	Known RBP	18.72	■□□□□ 0.59
C4A-256	ENST00000490663	PTPRB	P23467	1997 aa		18.72	■□□□□ 0.59
C4A-256	ENST00000490663	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	18.71	■□□□□ 0.59
C4A-256	ENST00000490663		A0A1W2PR77	199 aa		18.71	■□□□□ 0.59
C4A-256	ENST00000490663	PRR5-ARHGAP8	B1AHC4	643 aa		18.71	■□□□□ 0.59
C4A-256	ENST00000490663	PPP1R12A	O14974	1030 aa	Predicted RBP	18.71	■□□□□ 0.59
C4A-256	ENST00000490663	PAK4	O96013	591 aa	Predicted RBP	18.71	■□□□□ 0.59
C4A-256	ENST00000490663	CP	P00450	1065 aa		18.71	■□□□□ 0.59
C4A-256	ENST00000490663	CTPS1	P17812	591 aa		18.71	■□□□□ 0.59
C4A-256	ENST00000490663	CD38	P28907	300 aa		18.71	■□□□□ 0.59
C4A-256	ENST00000490663	GRIA4	P48058	902 aa		18.71	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms