RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 CROCCQ5TZA2 2017 aa13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 ARHGAP10A1A4S6 786 aa13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 TMEM110-MUSTN1A8MSY1 372 aa13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 AREL1O15033 823 aa13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 POLR2DO15514 142 aaKnown RBP13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 RFPL1O75677 317 aa13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 TNFP01375 233 aa13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 F8A1P23610 371 aa13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 HTR1BP28222 390 aa13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 CCR1P32246 355 aa13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 ABHD18Q0P651 414 aa13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 CRTC2Q53ET0 693 aaPredicted RBP13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 ZNF805Q5CZA5 627 aa13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 NKAIN2Q5VXU1 208 aa13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 FOXR2Q6PJQ5 311 aa13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 SHC4Q6S5L8 630 aa13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 TMEM270Q6UE05 265 aa13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 TMEM135Q86UB9 458 aa13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 PCDH20Q8N6Y1 951 aaKnown RBP13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 OR7D4Q8NG98 312 aa13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 CCL4L1Q8NHW4 92 aa13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 WRAP53Q9BUR4 548 aaKnown RBP13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 APOOQ9BUR5 198 aa13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 C1QTNF7Q9BXJ2 289 aa13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 TM6SF2Q9BZW4 377 aa13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 SIK2Q9H0K1 926 aa13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 MAGEF1Q9HAY2 307 aa13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 POPDC2Q9HBU9 364 aa13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 EXOC1Q9NV70 894 aa13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 TMEM9Q9P0T7 183 aa13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 HECAQ9UBI9 543 aaPredicted RBP13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 COQ6Q9Y2Z9 468 aa13.83□□□□□ -0.2
EXOSC3-207ENST00000490516 B4E171 279 aa13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 RNF225M0QZC1 329 aaPredicted RBP13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 SART1O43290 800 aaKnown RBP13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 DNAJB5O75953 348 aa13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 SORBS2O94875 1100 aaKnown RBP13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 SLC2A3P11169 496 aa13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 PSMC2P35998 433 aaKnown RBP13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 TSPAN7P41732 249 aa13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 SERPINH1P50454 418 aaKnown RBP13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 YWHAEP62258 255 aaKnown RBP13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 ENPEPQ07075 957 aa13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 LRMPQ12912 555 aa13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 TRA2AQ13595 282 aaKnown RBP eCLIP13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 ERV3-1Q14264 604 aa13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 INPP5AQ14642 412 aa13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 NAA30Q147X3 362 aaPredicted RBP13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 LRRC14Q15048 493 aa13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 TAF5Q15542 800 aa13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 INPP5JQ15735 1006 aaPredicted RBP13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 WSCD2Q2TBF2 565 aa13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 C5orf22Q49AR2 442 aa13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 SLC34A3Q8N130 599 aa13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 BMPERQ8N8U9 685 aa13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 CXorf40AQ8TE69 158 aa13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 OR1E3Q8WZA6 343 aa13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 VOPP1Q96AW1 172 aa13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 WDR92Q96MX6 357 aa13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 UNKQ9C0B0 810 aaKnown RBP13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 CEP44Q9C0F1 390 aa13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 TMEM168Q9H0V1 697 aa13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 MRPL40Q9NQ50 206 aaKnown RBP13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 DDIT4Q9NX09 232 aa13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 KCND3Q9UK17 655 aa13.82□□□□□ -0.2
EXOSC3-207ENST00000490516 RHPN2P1A8MT19 583 aa13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 PAGE1O75459 146 aa13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 ZMPSTE24O75844 475 aa13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 UGT2B4P06133 528 aa13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 PAEPP09466 180 aa13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 THRAP10827 490 aa13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 CSF2RBP32927 897 aa13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 RPL34P49207 117 aaKnown RBP13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 RAB15P59190 212 aa13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 YWHAZP63104 245 aaKnown RBP13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 DPYDQ12882 1025 aa13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 STK38Q15208 465 aa13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 CBWD6Q4V339 395 aa13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 CBWD3Q5JTY5 395 aa13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 CBWD5Q5RIA9 395 aa13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 ZNF438Q7Z4V0 828 aa13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 TFAP2DQ7Z6R9 452 aa13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 TTC7BQ86TV6 843 aa13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 IRF2BP1Q8IU81 584 aa13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 RYBPQ8N488 228 aaPredicted RBP13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 OR4D9Q8NGE8 314 aa13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 ARHGEF26Q96DR7 871 aa13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 KLHL32Q96NJ5 620 aa13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 SPON2Q9BUD6 331 aa13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 TRIM62Q9BVG3 475 aa13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 SNX10Q9Y5X0 201 aa13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 OAS3Q9Y6K5 1087 aaKnown RBP13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 DGKBQ9Y6T7 804 aa13.81□□□□□ -0.2
EXOSC3-207ENST00000490516 KRIT1O00522 736 aa13.8□□□□□ -0.2
EXOSC3-207ENST00000490516 HNRNPRO43390 633 aaKnown RBP13.8□□□□□ -0.2
EXOSC3-207ENST00000490516 STK17BO94768 372 aa13.8□□□□□ -0.2
EXOSC3-207ENST00000490516 STAT5AP42229 794 aa13.8□□□□□ -0.2
EXOSC3-207ENST00000490516 GPD2P43304 727 aa13.8□□□□□ -0.2
EXOSC3-207ENST00000490516 NASPP49321 788 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms