RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 TCF7L2Q9NQB0 619 aa3.88□□□□□ -1.79
HMGN1-218ENST00000490032 SMARCAL1Q9NZC9 954 aa3.88□□□□□ -1.79
HMGN1-218ENST00000490032 SUFUQ9UMX1 484 aa3.88□□□□□ -1.79
HMGN1-218ENST00000490032 RRP7AQ9Y3A4 280 aaKnown RBP3.88□□□□□ -1.79
HMGN1-218ENST00000490032 TAF1P21675 1872 aa3.88□□□□□ -1.79
HMGN1-218ENST00000490032 ERVV-2B6SEH9 535 aa3.87□□□□□ -1.79
HMGN1-218ENST00000490032 ANP32CO43423 234 aa3.87□□□□□ -1.79
HMGN1-218ENST00000490032 SP1P08047 785 aa3.87□□□□□ -1.79
HMGN1-218ENST00000490032 TFPIP10646 304 aa3.87□□□□□ -1.79
HMGN1-218ENST00000490032 GRK6P43250 576 aa3.87□□□□□ -1.79
HMGN1-218ENST00000490032 C17orf99Q6UX52 265 aa3.87□□□□□ -1.79
HMGN1-218ENST00000490032 UNQ6126/PRO20091Q6UXV3 157 aa3.87□□□□□ -1.79
HMGN1-218ENST00000490032 C9orf139Q6ZV77 190 aa3.87□□□□□ -1.79
HMGN1-218ENST00000490032 TUBA1AQ71U36 451 aa3.87□□□□□ -1.79
HMGN1-218ENST00000490032 SHFQ7M4L6 423 aa3.87□□□□□ -1.79
HMGN1-218ENST00000490032 CPXM2Q8N436 756 aa3.87□□□□□ -1.79
HMGN1-218ENST00000490032 CNOT9Q92600 299 aaKnown RBP3.87□□□□□ -1.79
HMGN1-218ENST00000490032 OTULINQ96BN8 352 aa3.87□□□□□ -1.79
HMGN1-218ENST00000490032 MTBPQ96DY7 904 aa3.87□□□□□ -1.79
HMGN1-218ENST00000490032 TUBA1CQ9BQE3 449 aa3.87□□□□□ -1.79
HMGN1-218ENST00000490032 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.87□□□□□ -1.79
HMGN1-218ENST00000490032 STN1Q9H668 368 aaKnown RBP3.87□□□□□ -1.79
HMGN1-218ENST00000490032 SDF2L1Q9HCN8 221 aa3.87□□□□□ -1.79
HMGN1-218ENST00000490032 CYSLTR2Q9NS75 346 aa3.87□□□□□ -1.79
HMGN1-218ENST00000490032 SLCO3A1Q9UIG8 710 aa3.87□□□□□ -1.79
HMGN1-218ENST00000490032 IGHV4OR15-8A0A075B7B6 117 aa3.86□□□□□ -1.79
HMGN1-218ENST00000490032 A0A0U1RQF3 1178 aa3.86□□□□□ -1.79
HMGN1-218ENST00000490032 ARHGAP10A1A4S6 786 aa3.86□□□□□ -1.79
HMGN1-218ENST00000490032 VWA3AA6NCI4 1184 aa3.86□□□□□ -1.79
HMGN1-218ENST00000490032 SH2D7A6NKC9 451 aaPredicted RBP3.86□□□□□ -1.79
HMGN1-218ENST00000490032 CLGNO14967 610 aa3.86□□□□□ -1.79
HMGN1-218ENST00000490032 WEE2P0C1S8 567 aa3.86□□□□□ -1.79
HMGN1-218ENST00000490032 ZNF8P17098 575 aaPredicted RBP3.86□□□□□ -1.79
HMGN1-218ENST00000490032 PTPN2P17706 415 aa3.86□□□□□ -1.79
HMGN1-218ENST00000490032 AMD1P17707 334 aa3.86□□□□□ -1.79
HMGN1-218ENST00000490032 ITGAXP20702 1163 aa3.86□□□□□ -1.79
HMGN1-218ENST00000490032 DGKAP23743 735 aa3.86□□□□□ -1.79
HMGN1-218ENST00000490032 BRWD1-AS2P59051 145 aa3.86□□□□□ -1.79
HMGN1-218ENST00000490032 ACSM2AQ08AH3 577 aa3.86□□□□□ -1.79
HMGN1-218ENST00000490032 ARL16Q0P5N6 197 aa3.86□□□□□ -1.79
HMGN1-218ENST00000490032 OTUD3Q5T2D3 398 aaPredicted RBP3.86□□□□□ -1.79
HMGN1-218ENST00000490032 OR1F2PQ96R84 312 aa3.86□□□□□ -1.79
HMGN1-218ENST00000490032 EVA1AQ9H8M9 152 aa3.86□□□□□ -1.79
HMGN1-218ENST00000490032 PCDHGB5Q9Y5G0 923 aa3.86□□□□□ -1.79
HMGN1-218ENST00000490032 hDV102S1A0JD36 115 aa3.85□□□□□ -1.79
HMGN1-218ENST00000490032 KLRF2D3W0D1 207 aa3.85□□□□□ -1.79
HMGN1-218ENST00000490032 PER2O15055 1255 aa3.85□□□□□ -1.79
HMGN1-218ENST00000490032 CEP104O60308 925 aa3.85□□□□□ -1.79
HMGN1-218ENST00000490032 ATP2C2O75185 946 aa3.85□□□□□ -1.79
HMGN1-218ENST00000490032 RGS11O94810 467 aa3.85□□□□□ -1.79
HMGN1-218ENST00000490032 NDUFB4O95168 129 aa3.85□□□□□ -1.79
HMGN1-218ENST00000490032 CLDN14O95500 239 aa3.85□□□□□ -1.79
HMGN1-218ENST00000490032 LINC00271P0C7V0 271 aa3.85□□□□□ -1.79
HMGN1-218ENST00000490032 PIGAP37287 484 aa3.85□□□□□ -1.79
HMGN1-218ENST00000490032 TBL3Q12788 808 aaKnown RBP3.85□□□□□ -1.79
HMGN1-218ENST00000490032 TROAPQ12815 778 aa3.85□□□□□ -1.79
HMGN1-218ENST00000490032 ANKRD1Q15327 319 aa3.85□□□□□ -1.79
HMGN1-218ENST00000490032 OASLQ15646 514 aaKnown RBP3.85□□□□□ -1.79
HMGN1-218ENST00000490032 SOWAHAQ2M3V2 549 aa3.85□□□□□ -1.79
HMGN1-218ENST00000490032 EDRF1Q3B7T1 1238 aa3.85□□□□□ -1.79
HMGN1-218ENST00000490032 ESCO2Q56NI9 601 aa3.85□□□□□ -1.79
HMGN1-218ENST00000490032 PPP6R3Q5H9R7 873 aaPredicted RBP3.85□□□□□ -1.79
HMGN1-218ENST00000490032 ANO1Q5XXA6 986 aa3.85□□□□□ -1.79
HMGN1-218ENST00000490032 ZC3HC1Q86WB0 502 aaKnown RBP3.85□□□□□ -1.79
HMGN1-218ENST00000490032 SUGP1Q8IWZ8 645 aaKnown RBP3.85□□□□□ -1.79
HMGN1-218ENST00000490032 EPHX3Q9H6B9 360 aa3.85□□□□□ -1.79
HMGN1-218ENST00000490032 ZNF224Q9NZL3 707 aa3.85□□□□□ -1.79
HMGN1-218ENST00000490032 SLC9A2Q9UBY0 812 aa3.85□□□□□ -1.79
HMGN1-218ENST00000490032 TYW5A2RUC4 315 aaKnown RBP3.84□□□□□ -1.79
HMGN1-218ENST00000490032 PABPN1LA6NDY0 278 aaKnown RBP3.84□□□□□ -1.79
HMGN1-218ENST00000490032 HSPB2A8KAH6 182 aa3.84□□□□□ -1.79
HMGN1-218ENST00000490032 PEX12O00623 359 aa3.84□□□□□ -1.79
HMGN1-218ENST00000490032 NTN3O00634 580 aaPredicted RBP3.84□□□□□ -1.79
HMGN1-218ENST00000490032 IRAK2O43187 625 aa3.84□□□□□ -1.79
HMGN1-218ENST00000490032 SOCS5O75159 536 aa3.84□□□□□ -1.79
HMGN1-218ENST00000490032 KDM4BO94953 1096 aa3.84□□□□□ -1.79
HMGN1-218ENST00000490032 GPTP24298 496 aa3.84□□□□□ -1.79
HMGN1-218ENST00000490032 CHATP28329 748 aa3.84□□□□□ -1.79
HMGN1-218ENST00000490032 PAPOLAP51003 745 aaKnown RBP3.84□□□□□ -1.79
HMGN1-218ENST00000490032 NR1H2P55055 460 aa3.84□□□□□ -1.79
HMGN1-218ENST00000490032 HDAC4P56524 1084 aa3.84□□□□□ -1.79
HMGN1-218ENST00000490032 ARL4CP56559 192 aa3.84□□□□□ -1.79
HMGN1-218ENST00000490032 YWHAZP63104 245 aaKnown RBP3.84□□□□□ -1.79
HMGN1-218ENST00000490032 ZNF155Q12901 538 aaPredicted RBP3.84□□□□□ -1.79
HMGN1-218ENST00000490032 TAF5Q15542 800 aa3.84□□□□□ -1.79
HMGN1-218ENST00000490032 EFNB3Q15768 340 aa3.84□□□□□ -1.79
HMGN1-218ENST00000490032 HSPB2Q16082 182 aa3.84□□□□□ -1.79
HMGN1-218ENST00000490032 AMZ1Q400G9 498 aa3.84□□□□□ -1.79
HMGN1-218ENST00000490032 MOB3CQ70IA8 216 aa3.84□□□□□ -1.79
HMGN1-218ENST00000490032 LURAP1LQ8IV03 231 aa3.84□□□□□ -1.79
HMGN1-218ENST00000490032 DCUN1D3Q8IWE4 304 aa3.84□□□□□ -1.79
HMGN1-218ENST00000490032 LMNTD1Q8N9Z9 388 aa3.84□□□□□ -1.79
HMGN1-218ENST00000490032 SECTM1Q8WVN6 248 aa3.84□□□□□ -1.79
HMGN1-218ENST00000490032 COG8Q96MW5 612 aa3.84□□□□□ -1.79
HMGN1-218ENST00000490032 TWNKQ96RR1 684 aa3.84□□□□□ -1.79
HMGN1-218ENST00000490032 CD180Q99467 661 aa3.84□□□□□ -1.79
HMGN1-218ENST00000490032 TAOK3Q9H2K8 898 aa3.84□□□□□ -1.79
HMGN1-218ENST00000490032 MROH8Q9H579 483 aa3.84□□□□□ -1.79
HMGN1-218ENST00000490032 SIX4Q9UIU6 781 aa3.84□□□□□ -1.79
HMGN1-218ENST00000490032 ADAM18Q9Y3Q7 739 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms