RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 CCDC129Q6ZRS4 1044 aa5.37□□□□□ -1.55
CCDC39-206ENST00000489868 TMED6Q8WW62 240 aa5.37□□□□□ -1.55
CCDC39-206ENST00000489868 TRIB2Q92519 343 aa5.37□□□□□ -1.55
CCDC39-206ENST00000489868 TXNDC15Q96J42 360 aa5.37□□□□□ -1.55
CCDC39-206ENST00000489868 SLC25A33Q9BSK2 321 aa5.37□□□□□ -1.55
CCDC39-206ENST00000489868 IL25Q9H293 177 aa5.37□□□□□ -1.55
CCDC39-206ENST00000489868 CD93Q9NPY3 652 aa5.37□□□□□ -1.55
CCDC39-206ENST00000489868 DDX4Q9NQI0 724 aaKnown RBP5.37□□□□□ -1.55
CCDC39-206ENST00000489868 C20orf141Q9NUB4 165 aa5.37□□□□□ -1.55
CCDC39-206ENST00000489868 OCIAD1Q9NX40 245 aa5.37□□□□□ -1.55
CCDC39-206ENST00000489868 OR6C3Q9NZP0 311 aa5.37□□□□□ -1.55
CCDC39-206ENST00000489868 HCN3Q9P1Z3 774 aa5.37□□□□□ -1.55
CCDC39-206ENST00000489868 CRYL1Q9Y2S2 319 aa5.37□□□□□ -1.55
CCDC39-206ENST00000489868 VNN2O95498 520 aa5.36□□□□□ -1.55
CCDC39-206ENST00000489868 PRSS2P07478 247 aa5.36□□□□□ -1.55
CCDC39-206ENST00000489868 C21orf33P30042 268 aaPredicted RBP5.36□□□□□ -1.55
CCDC39-206ENST00000489868 RPP30P78346 268 aaKnown RBP5.36□□□□□ -1.55
CCDC39-206ENST00000489868 ST3GAL1Q11201 340 aa5.36□□□□□ -1.55
CCDC39-206ENST00000489868 KIF5AQ12840 1032 aa5.36□□□□□ -1.55
CCDC39-206ENST00000489868 NFATC4Q14934 902 aa5.36□□□□□ -1.55
CCDC39-206ENST00000489868 SETMARQ53H47 684 aaPredicted RBP5.36□□□□□ -1.55
CCDC39-206ENST00000489868 TYW3Q6IPR3 259 aaKnown RBP5.36□□□□□ -1.55
CCDC39-206ENST00000489868 PDXDC1Q6P996 788 aa5.36□□□□□ -1.55
CCDC39-206ENST00000489868 TADA2BQ86TJ2 420 aa5.36□□□□□ -1.55
CCDC39-206ENST00000489868 DHX40Q8IX18 779 aaKnown RBP5.36□□□□□ -1.55
CCDC39-206ENST00000489868 RBMXL3Q8N7X1 1067 aaKnown RBP5.36□□□□□ -1.55
CCDC39-206ENST00000489868 FAM216AQ8WUB2 273 aa5.36□□□□□ -1.55
CCDC39-206ENST00000489868 MXRA8Q9BRK3 442 aa5.36□□□□□ -1.55
CCDC39-206ENST00000489868 WASH6PQ9NQA3 447 aa5.36□□□□□ -1.55
CCDC39-206ENST00000489868 SELENONQ9NZV5 590 aa5.36□□□□□ -1.55
CCDC39-206ENST00000489868 KCNJ13O60928 360 aa5.35□□□□□ -1.55
CCDC39-206ENST00000489868 ABCD3P28288 659 aa5.35□□□□□ -1.55
CCDC39-206ENST00000489868 FMO4P31512 558 aa5.35□□□□□ -1.55
CCDC39-206ENST00000489868 CAMK1Q14012 370 aa5.35□□□□□ -1.55
CCDC39-206ENST00000489868 ARHGEF6Q15052 776 aa5.35□□□□□ -1.55
CCDC39-206ENST00000489868 TAF11Q15544 211 aa5.35□□□□□ -1.55
CCDC39-206ENST00000489868 GPR68Q15743 365 aa5.35□□□□□ -1.55
CCDC39-206ENST00000489868 SLC9B1Q4ZJI4 515 aa5.35□□□□□ -1.55
CCDC39-206ENST00000489868 KLHL22Q53GT1 634 aa5.35□□□□□ -1.55
CCDC39-206ENST00000489868 FAM69BQ5VUD6 431 aa5.35□□□□□ -1.55
CCDC39-206ENST00000489868 HIST2H2BCQ6DN03 193 aa5.35□□□□□ -1.55
CCDC39-206ENST00000489868 HIST2H2BDQ6DRA6 164 aa5.35□□□□□ -1.55
CCDC39-206ENST00000489868 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.35□□□□□ -1.55
CCDC39-206ENST00000489868 ARMC9Q7Z3E5 817 aa5.35□□□□□ -1.55
CCDC39-206ENST00000489868 LMO3Q8TAP4 145 aa5.35□□□□□ -1.55
CCDC39-206ENST00000489868 ST8SIA4Q92187 359 aa5.35□□□□□ -1.55
CCDC39-206ENST00000489868 RNF125Q96EQ8 232 aa5.35□□□□□ -1.55
CCDC39-206ENST00000489868 ZC3HAV1LQ96H79 300 aaKnown RBP5.35□□□□□ -1.55
CCDC39-206ENST00000489868 CTAGE1Q96RT6 745 aa5.35□□□□□ -1.55
CCDC39-206ENST00000489868 MEIS3Q99687 375 aa5.35□□□□□ -1.55
CCDC39-206ENST00000489868 EIF2AK1Q9BQI3 630 aaKnown RBP5.35□□□□□ -1.55
CCDC39-206ENST00000489868 AGXT2Q9BYV1 514 aa5.35□□□□□ -1.55
CCDC39-206ENST00000489868 SLCO5A1Q9H2Y9 848 aa5.35□□□□□ -1.55
CCDC39-206ENST00000489868 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.35□□□□□ -1.55
CCDC39-206ENST00000489868 PLEKHD1A6NEE1 506 aa5.34□□□□□ -1.55
CCDC39-206ENST00000489868 ZBTB11O95625 1053 aaPredicted RBP5.34□□□□□ -1.55
CCDC39-206ENST00000489868 AGR2O95994 175 aa5.34□□□□□ -1.55
CCDC39-206ENST00000489868 FCGR1AP12314 374 aa5.34□□□□□ -1.55
CCDC39-206ENST00000489868 HOXB6P17509 224 aaKnown RBP5.34□□□□□ -1.55
CCDC39-206ENST00000489868 RPL3P39023 403 aaKnown RBP5.34□□□□□ -1.55
CCDC39-206ENST00000489868 KCNJ4P48050 445 aa5.34□□□□□ -1.55
CCDC39-206ENST00000489868 EFNB3Q15768 340 aa5.34□□□□□ -1.55
CCDC39-206ENST00000489868 BAK1Q16611 211 aa5.34□□□□□ -1.55
CCDC39-206ENST00000489868 DCAF6Q58WW2 860 aa5.34□□□□□ -1.55
CCDC39-206ENST00000489868 NADSYN1Q6IA69 706 aa5.34□□□□□ -1.55
CCDC39-206ENST00000489868 PRSS57Q6UWY2 283 aa5.34□□□□□ -1.55
CCDC39-206ENST00000489868 H1FNTQ75WM6 255 aaPredicted RBP5.34□□□□□ -1.55
CCDC39-206ENST00000489868 ADHFE1Q8IWW8 467 aa5.34□□□□□ -1.55
CCDC39-206ENST00000489868 ZCCHC10Q8TBK6 192 aa5.34□□□□□ -1.55
CCDC39-206ENST00000489868 KLHL15Q96M94 604 aa5.34□□□□□ -1.55
CCDC39-206ENST00000489868 FIZ1Q96SL8 496 aa5.34□□□□□ -1.55
CCDC39-206ENST00000489868 MYH16Q9H6N6 1097 aa5.34□□□□□ -1.55
CCDC39-206ENST00000489868 C9orf78Q9NZ63 289 aaPredicted RBP5.34□□□□□ -1.55
CCDC39-206ENST00000489868 CARD8Q9Y2G2 431 aa5.34□□□□□ -1.55
CCDC39-206ENST00000489868 NFE2L3Q9Y4A8 694 aa5.34□□□□□ -1.55
CCDC39-206ENST00000489868 CYP46A1Q9Y6A2 500 aa5.34□□□□□ -1.55
CCDC39-206ENST00000489868 LOC102724159A0A0B4J2E5 919 aa5.33□□□□□ -1.56
CCDC39-206ENST00000489868 TEX13CA0A0J9YWL9 993 aa5.33□□□□□ -1.56
CCDC39-206ENST00000489868 A0A1W2PQM1 296 aa5.33□□□□□ -1.56
CCDC39-206ENST00000489868 NPIPB11E5RHQ5 1161 aa5.33□□□□□ -1.56
CCDC39-206ENST00000489868 HSPA12AO43301 675 aa5.33□□□□□ -1.56
CCDC39-206ENST00000489868 SERPINI2O75830 405 aa5.33□□□□□ -1.56
CCDC39-206ENST00000489868 CH25HO95992 272 aa5.33□□□□□ -1.56
CCDC39-206ENST00000489868 POU1F1P28069 291 aa5.33□□□□□ -1.56
CCDC39-206ENST00000489868 SSTR2P30874 369 aa5.33□□□□□ -1.56
CCDC39-206ENST00000489868 DHX34Q14147 1143 aaKnown RBP5.33□□□□□ -1.56
CCDC39-206ENST00000489868 PWP2Q15269 919 aaKnown RBP5.33□□□□□ -1.56
CCDC39-206ENST00000489868 RNPS1Q15287 305 aaKnown RBP5.33□□□□□ -1.56
CCDC39-206ENST00000489868 ASIC2Q16515 512 aa5.33□□□□□ -1.56
CCDC39-206ENST00000489868 SGO1Q5FBB7 561 aa5.33□□□□□ -1.56
CCDC39-206ENST00000489868 TXNDC8Q6A555 127 aa5.33□□□□□ -1.56
CCDC39-206ENST00000489868 ANKRD54Q6NXT1 300 aa5.33□□□□□ -1.56
CCDC39-206ENST00000489868 C16orf82Q7Z2V1 217 aa5.33□□□□□ -1.56
CCDC39-206ENST00000489868 TDRPQ86YL5 185 aa5.33□□□□□ -1.56
CCDC39-206ENST00000489868 PGBD5Q8N414 524 aa5.33□□□□□ -1.56
CCDC39-206ENST00000489868 C11orf65Q8NCR3 313 aa5.33□□□□□ -1.56
CCDC39-206ENST00000489868 PPM1EQ8WY54 764 aa5.33□□□□□ -1.56
CCDC39-206ENST00000489868 WASF1Q92558 559 aa5.33□□□□□ -1.56
CCDC39-206ENST00000489868 RRP36Q96EU6 259 aaKnown RBP5.33□□□□□ -1.56
CCDC39-206ENST00000489868 TM6SF1Q9BZW5 370 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms