RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 GOLGA8DPQ0D2H9 430 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 HNRNPDQ14103 355 aaKnown RBP6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 GPR19Q15760 415 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 GEN1Q17RS7 908 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 FUT11Q495W5 492 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 C10orf120Q5SQS8 335 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 TMEM215Q68D42 235 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 ARHGAP17Q68EM7 881 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 SDE2Q6IQ49 451 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 KIAA0907Q7Z7F0 614 aaPredicted RBP6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 TADA2BQ86TJ2 420 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 PROSER1Q86XN7 944 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 NLGN4XQ8N0W4 816 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 CPXM2Q8N436 756 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 MINDY1Q8N5J2 469 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 DTX3Q8N9I9 347 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 ANKRD52Q8NB46 1076 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 CADM4Q8NFZ8 388 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 OR2I1PQ8NGU4 316 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 ZCCHC14Q8WYQ9 949 aaKnown RBP6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 CDK5RAP1Q96SZ6 601 aaKnown RBP6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 KRTAP4-9Q9BYQ8 210 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 SLC2A11Q9BYW1 496 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 DCLK3Q9C098 648 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 ZDHHC5Q9C0B5 715 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 NACA2Q9H009 215 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 OSBPL2Q9H1P3 480 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 TMEM8AQ9HCN3 771 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 CISHQ9NSE2 258 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 ELOVL2Q9NXB9 296 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 PLK2Q9NYY3 685 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 STOML2Q9UJZ1 356 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 SRPK3Q9UPE1 567 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 COQ4Q9Y3A0 265 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 RAD54BQ9Y620 910 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 NUP205Q92621 2012 aa6.64□□□□□ -1.35
PRPF40A-210ENST00000489741 BAHCC1Q9P281 2608 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 TULP2O00295 520 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 WNT9AO14904 365 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 GSTA4O15217 222 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 TIMM44O43615 452 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 SH3BP5O60239 455 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 KIF20AO95235 890 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 RALAP11233 206 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 CD58P19256 250 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 NR2F2P24468 414 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 CD6P30203 668 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 CORO1AP31146 461 aaKnown RBP6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 PI4KAP42356 2102 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 HELZP42694 1942 aaKnown RBP6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 IL12RB1P42701 662 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 SYKP43405 635 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 GLRBP48167 497 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 TPMTP51580 245 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 BNC1Q01954 994 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 ZNF234Q14588 700 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 SKIDA1Q1XH10 827 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 EDRF1Q3B7T1 1238 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 SYCP2LQ5T4T6 812 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 CD276Q5ZPR3 534 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 KRT39Q6A163 491 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 GLRX5Q86SX6 157 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 PIGZQ86VD9 579 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 PTRH1Q86Y79 214 aaKnown RBP6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 TMPRSS6Q8IU80 811 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 ZC3H3Q8IXZ2 948 aaKnown RBP6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 FAM186BQ8IYM0 893 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 SCML4Q8N228 414 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 ARHGAP18Q8N392 663 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 HDDC3Q8N4P3 179 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 CHCHD4Q8N4Q1 142 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 TTC39CQ8N584 583 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 THAP3Q8WTV1 239 aaPredicted RBP6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 ADAMTS14Q8WXS8 1223 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 KISS1RQ969F8 398 aaPredicted RBP6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 TMEM176AQ96HP8 235 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 CAMK1GQ96NX5 476 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 GTPBP2Q9BX10 602 aaKnown RBP6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 IMPG2Q9BZV3 1241 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 TMEM245Q9H330 911 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 RIC8BQ9NVN3 520 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 RAB20Q9NX57 234 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 ARHGAP20Q9P2F6 1191 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 ZFP69BQ9UJL9 534 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 KLK13Q9UKR3 277 aa6.63□□□□□ -1.35
PRPF40A-210ENST00000489741 A0A1B0GTW7 788 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 CCDC66A2RUB6 948 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 C10orf142B7Z368 130 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 NDUFS2O75306 463 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 ZBED1O96006 694 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 ENO2P09104 434 aaPredicted RBP6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 ZNF883P0CG24 379 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 KRT13P13646 458 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 GNSP15586 552 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 TRIM21P19474 475 aaKnown RBP6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 HOXD9P28356 352 aaPredicted RBP6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 OXTRP30559 389 aa6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 ATXN3P54252 364 aaPredicted RBP6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 YWHAGP61981 247 aaKnown RBP eCLIP6.62□□□□□ -1.35
PRPF40A-210ENST00000489741 EFEMP1Q12805 493 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms