RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 CARD16Q5EG05 197 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 ZFYVE27Q5T4F4 411 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 NAPEPLDQ6IQ20 393 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 NEK5Q6P3R8 708 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 DPY19L3Q6ZPD9 716 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 CTAGE6Q86UF2 777 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 RFX6Q8HWS3 928 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 CTAGE4Q8IX94 777 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 PLPP6Q8IY26 295 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 NETO2Q8NC67 525 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 ATG4AQ8WYN0 398 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 SERAC1Q96JX3 654 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 SLC6A18Q96N87 628 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 CNTNAP3BQ96NU0 1288 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 FAM118BQ9BPY3 351 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 CNTNAP3Q9BZ76 1288 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 TNKS2Q9H2K2 1166 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 CATSPERBQ9H7T0 1116 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 EBF2Q9HAK2 575 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 AASDHPPTQ9NRN7 309 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 DONSONQ9NYP3 566 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 DTLQ9NZJ0 730 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 DMTF1Q9Y222 760 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 SPAARA0A1B0GVQ0 90 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 APOC4-APOC2K7ER74 178 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 APOL1O14791 398 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 PCDHGA12O60330 932 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 MAGEC1O60732 1142 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 ZNF821O75541 412 aaPredicted RBP10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 APOC2P02655 101 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 TGM2P21980 687 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 ACVRL1P37023 503 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 CCT8P50990 548 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 YBEYP58557 167 aaPredicted RBP10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 PPP2CBP62714 309 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 PPP2CAP67775 309 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 OTUD4Q01804 1114 aaKnown RBP10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 FOXC1Q12948 553 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 TFDP2Q14188 446 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 TRIP6Q15654 476 aaKnown RBP10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 LONRF2Q1L5Z9 754 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 ZNF423Q2M1K9 1284 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 SETMARQ53H47 684 aaPredicted RBP10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 ARSIQ5FYB1 569 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 PIP5KL1Q5T9C9 394 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 TTC27Q6P3X3 843 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 LAYNQ6UX15 382 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 DBX2Q6ZNG2 339 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 ERN2Q76MJ5 926 aaKnown RBP10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 IQCHQ86VS3 1027 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 UMODL1-AS1Q8N2C9 162 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 CHST14Q8NCH0 376 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 SLC35B2Q8TB61 432 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 ACTL9Q8TC94 416 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 GRIN3AQ8TCU5 1115 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 SETD7Q8WTS6 366 aaKnown RBP10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 CASKIN2Q8WXE0 1202 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 ANKRD7Q92527 254 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 HAUS1Q96CS2 278 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 LRIG1Q96JA1 1093 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 HEPHQ9BQS7 1158 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 AP1M1Q9BXS5 423 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 HDAC8Q9BY41 377 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 LRRC19Q9H756 370 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 GDF3Q9NR23 364 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 PCOLCE2Q9UKZ9 415 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 FCF1Q9Y324 198 aaKnown RBP10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 WASF2Q9Y6W5 498 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 ADAMTS9Q9P2N4 1935 aa10.7□□□□□ -0.7
SCAMP4-208ENST00000489554 A0A1W2PR77 199 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 PRAMEF26H0Y7S4 382 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 H0Y8X5 98 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 YKT6O15498 198 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 KDELR3O43731 214 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 LIASO43766 372 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 RNGTTO60942 597 aaKnown RBP10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 CBFA2T3O75081 653 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 LEFTY1O75610 366 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 TJP3O95049 919 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 MAP3K6O95382 1288 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 CD160O95971 181 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 GSRP00390 522 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 ITGB7P26010 798 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 PAFAH1B1P43034 410 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 CCNHP51946 323 aaPredicted RBP10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 NEK3P51956 506 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 TAS2R38P59533 333 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 SNRPD1P62314 119 aaKnown RBP10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 FAM193AP78312 1265 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 OVGP1Q12889 678 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 OASLQ15646 514 aaKnown RBP10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 INAVAQ3KP66 663 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 PARP15Q460N3 678 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 TMCO3Q6UWJ1 677 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 GLRX5Q86SX6 157 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 ZNF354CQ86Y25 554 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 MFSD2AQ8NA29 543 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 SPATA4Q8NEY3 305 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 OR2AP1Q8NGE2 309 aa10.69□□□□□ -0.7
SCAMP4-208ENST00000489554 LRRN4Q8WUT4 740 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms