RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 PDCD6IPQ8WUM4 868 aaKnown RBP9.31□□□□□ -0.92
SSBP1-212ENST00000489378 RPRD1AQ96P16 312 aaPredicted RBP9.31□□□□□ -0.92
SSBP1-212ENST00000489378 PPP1R9BQ96SB3 815 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 ZSWIM1Q9BR11 485 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 NUDT22Q9BRQ3 303 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 MUC3BQ9H195 1237 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 CUEDC2Q9H467 287 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 TMEM8AQ9HCN3 771 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 LRIT1Q9P2V4 623 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 FKBPLQ9UIM3 349 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 SMC3Q9UQE7 1217 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 FRMD4BQ9Y2L6 1034 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 CHD5Q8TDI0 1954 aa9.3□□□□□ -0.92
SSBP1-212ENST00000489378 IGHV5-10-1A0A0J9YXX1 117 aa9.3□□□□□ -0.92
SSBP1-212ENST00000489378 NEMP1O14524 444 aa9.3□□□□□ -0.92
SSBP1-212ENST00000489378 HGSO14964 777 aaPredicted RBP9.3□□□□□ -0.92
SSBP1-212ENST00000489378 RASGRP1O95267 797 aa9.3□□□□□ -0.92
SSBP1-212ENST00000489378 CPNE6O95741 557 aa9.3□□□□□ -0.92
SSBP1-212ENST00000489378 LDLRP01130 860 aa9.3□□□□□ -0.92
SSBP1-212ENST00000489378 IGLV3-25P01717 112 aa9.3□□□□□ -0.92
SSBP1-212ENST00000489378 PNLIPP16233 465 aa9.3□□□□□ -0.92
SSBP1-212ENST00000489378 BLKP51451 505 aa9.3□□□□□ -0.92
SSBP1-212ENST00000489378 CUL4BQ13620 913 aa9.3□□□□□ -0.92
SSBP1-212ENST00000489378 ARHGEF7Q14155 803 aa9.3□□□□□ -0.92
SSBP1-212ENST00000489378 SLC39A14Q15043 492 aa9.3□□□□□ -0.92
SSBP1-212ENST00000489378 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.3□□□□□ -0.92
SSBP1-212ENST00000489378 LCLAT1Q6UWP7 414 aa9.3□□□□□ -0.92
SSBP1-212ENST00000489378 PIM3Q86V86 326 aa9.3□□□□□ -0.92
SSBP1-212ENST00000489378 ZC3H18Q86VM9 953 aaKnown RBP9.3□□□□□ -0.92
SSBP1-212ENST00000489378 ZSCAN30Q86W11 494 aa9.3□□□□□ -0.92
SSBP1-212ENST00000489378 CCDC13Q8IYE1 715 aa9.3□□□□□ -0.92
SSBP1-212ENST00000489378 ATP6V0D2Q8N8Y2 350 aa9.3□□□□□ -0.92
SSBP1-212ENST00000489378 STARD8Q92502 1023 aa9.3□□□□□ -0.92
SSBP1-212ENST00000489378 FAM149B1Q96BN6 582 aa9.3□□□□□ -0.92
SSBP1-212ENST00000489378 MOCOSQ96EN8 888 aa9.3□□□□□ -0.92
SSBP1-212ENST00000489378 FAXDC2Q96IV6 333 aa9.3□□□□□ -0.92
SSBP1-212ENST00000489378 CCDC74BQ96LY2 380 aa9.3□□□□□ -0.92
SSBP1-212ENST00000489378 DDA1Q9BW61 102 aa9.3□□□□□ -0.92
SSBP1-212ENST00000489378 ZSCAN16Q9H4T2 348 aaPredicted RBP9.3□□□□□ -0.92
SSBP1-212ENST00000489378 ERRFI1Q9UJM3 462 aaPredicted RBP9.3□□□□□ -0.92
SSBP1-212ENST00000489378 PILRAQ9UKJ1 303 aa9.3□□□□□ -0.92
SSBP1-212ENST00000489378 VANGL2Q9ULK5 521 aa9.3□□□□□ -0.92
SSBP1-212ENST00000489378 TBC1D30Q9Y2I9 924 aa9.3□□□□□ -0.92
SSBP1-212ENST00000489378 KCNMB2Q9Y691 235 aa9.3□□□□□ -0.92
SSBP1-212ENST00000489378 DNHD1Q96M86 4753 aa9.29□□□□□ -0.92
SSBP1-212ENST00000489378 PVALEFA0A1B0GWK0 134 aa9.29□□□□□ -0.92
SSBP1-212ENST00000489378 B4DGG1 531 aa9.29□□□□□ -0.92
SSBP1-212ENST00000489378 TCP11X1B4DZS4 312 aa9.29□□□□□ -0.92
SSBP1-212ENST00000489378 MKRN2OSH3BPM6 223 aa9.29□□□□□ -0.92
SSBP1-212ENST00000489378 M0QYV0 167 aa9.29□□□□□ -0.92
SSBP1-212ENST00000489378 PDXKO00764 312 aa9.29□□□□□ -0.92
SSBP1-212ENST00000489378 FBXO21O94952 628 aa9.29□□□□□ -0.92
SSBP1-212ENST00000489378 TRUB2O95900 331 aaKnown RBP9.29□□□□□ -0.92
SSBP1-212ENST00000489378 CALCAP01258 141 aa9.29□□□□□ -0.92
SSBP1-212ENST00000489378 VDRP11473 427 aa9.29□□□□□ -0.92
SSBP1-212ENST00000489378 PDCP20941 246 aa9.29□□□□□ -0.92
SSBP1-212ENST00000489378 OR1D5P58170 312 aa9.29□□□□□ -0.92
SSBP1-212ENST00000489378 KRT83P78385 493 aa9.29□□□□□ -0.92
SSBP1-212ENST00000489378 PTSQ03393 145 aa9.29□□□□□ -0.92
SSBP1-212ENST00000489378 EIF4EBP2Q13542 120 aaPredicted RBP9.29□□□□□ -0.92
SSBP1-212ENST00000489378 AUHQ13825 339 aaKnown RBP9.29□□□□□ -0.92
SSBP1-212ENST00000489378 HLTFQ14527 1009 aaKnown RBP eCLIP9.29□□□□□ -0.92
SSBP1-212ENST00000489378 C14orf28Q4W4Y0 310 aa9.29□□□□□ -0.92
SSBP1-212ENST00000489378 ANKS6Q68DC2 871 aa9.29□□□□□ -0.92
SSBP1-212ENST00000489378 KRT39Q6A163 491 aa9.29□□□□□ -0.92
SSBP1-212ENST00000489378 OGFOD3Q6PK18 319 aa9.29□□□□□ -0.92
SSBP1-212ENST00000489378 TIPARPQ7Z3E1 657 aaKnown RBP9.29□□□□□ -0.92
SSBP1-212ENST00000489378 NLGN4XQ8N0W4 816 aa9.29□□□□□ -0.92
SSBP1-212ENST00000489378 TP53I13Q8NBR0 393 aaPredicted RBP9.29□□□□□ -0.92
SSBP1-212ENST00000489378 NLGN4YQ8NFZ3 816 aaPredicted RBP9.29□□□□□ -0.92
SSBP1-212ENST00000489378 KIAA1143Q96AT1 154 aaPredicted RBP9.29□□□□□ -0.92
SSBP1-212ENST00000489378 USP28Q96RU2 1077 aa9.29□□□□□ -0.92
SSBP1-212ENST00000489378 HAPLN3Q96S86 360 aa9.29□□□□□ -0.92
SSBP1-212ENST00000489378 KCTD15Q96SI1 283 aaPredicted RBP9.29□□□□□ -0.92
SSBP1-212ENST00000489378 C2orf49Q9BVC5 232 aaPredicted RBP9.29□□□□□ -0.92
SSBP1-212ENST00000489378 SPRY4Q9C004 299 aa9.29□□□□□ -0.92
SSBP1-212ENST00000489378 OCIAD1Q9NX40 245 aa9.29□□□□□ -0.92
SSBP1-212ENST00000489378 RAB20Q9NX57 234 aa9.29□□□□□ -0.92
SSBP1-212ENST00000489378 SLC39A1Q9NY26 324 aa9.29□□□□□ -0.92
SSBP1-212ENST00000489378 DKK3Q9UBP4 350 aa9.29□□□□□ -0.92
SSBP1-212ENST00000489378 MRPS18BQ9Y676 258 aaKnown RBP9.29□□□□□ -0.92
SSBP1-212ENST00000489378 SPG11Q96JI7 2443 aa9.28□□□□□ -0.92
SSBP1-212ENST00000489378 DIDO1Q9BTC0 2240 aaKnown RBP9.28□□□□□ -0.92
SSBP1-212ENST00000489378 A0A0D9SEW6 157 aa9.28□□□□□ -0.92
SSBP1-212ENST00000489378 C16orf96A6NNT2 1141 aa9.28□□□□□ -0.92
SSBP1-212ENST00000489378 MAPK13O15264 365 aa9.28□□□□□ -0.92
SSBP1-212ENST00000489378 KLRC4O43908 158 aa9.28□□□□□ -0.92
SSBP1-212ENST00000489378 MMP20O60882 483 aa9.28□□□□□ -0.92
SSBP1-212ENST00000489378 TCN2P20062 427 aa9.28□□□□□ -0.92
SSBP1-212ENST00000489378 MPSTP25325 297 aa9.28□□□□□ -0.92
SSBP1-212ENST00000489378 GKP32189 559 aa9.28□□□□□ -0.92
SSBP1-212ENST00000489378 DNA2P51530 1060 aa9.28□□□□□ -0.92
SSBP1-212ENST00000489378 CCNHP51946 323 aaPredicted RBP9.28□□□□□ -0.92
SSBP1-212ENST00000489378 SRP54P61011 504 aaKnown RBP9.28□□□□□ -0.92
SSBP1-212ENST00000489378 CUL2Q13617 745 aa9.28□□□□□ -0.92
SSBP1-212ENST00000489378 IRF4Q15306 451 aa9.28□□□□□ -0.92
SSBP1-212ENST00000489378 NR6A1Q15406 480 aa9.28□□□□□ -0.92
SSBP1-212ENST00000489378 EDRF1Q3B7T1 1238 aa9.28□□□□□ -0.92
SSBP1-212ENST00000489378 PRR30Q53SZ7 412 aaPredicted RBP9.28□□□□□ -0.92
SSBP1-212ENST00000489378 LRRC73Q5JTD7 316 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms