RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 OGFOD3Q6PK18 319 aa16.36■□□□□ 0.21
USP48-210ENST00000489108 GDPD4Q6W3E5 623 aa16.36■□□□□ 0.21
USP48-210ENST00000489108 LEKR1Q6ZMV7 388 aa16.36■□□□□ 0.21
USP48-210ENST00000489108 SPRED1Q7Z699 444 aa16.36■□□□□ 0.21
USP48-210ENST00000489108 C1orf131Q8NDD1 294 aaKnown RBP16.36■□□□□ 0.21
USP48-210ENST00000489108 FAM46DQ8NEK8 389 aa16.36■□□□□ 0.21
USP48-210ENST00000489108 OR2AP1Q8NGE2 309 aa16.36■□□□□ 0.21
USP48-210ENST00000489108 NT5C3BQ969T7 300 aa16.36■□□□□ 0.21
USP48-210ENST00000489108 PGAP3Q96FM1 320 aaPredicted RBP16.36■□□□□ 0.21
USP48-210ENST00000489108 CCDC34Q96HJ3 373 aa16.36■□□□□ 0.21
USP48-210ENST00000489108 TBCBQ99426 244 aa16.36■□□□□ 0.21
USP48-210ENST00000489108 APOOQ9BUR5 198 aa16.36■□□□□ 0.21
USP48-210ENST00000489108 OSBPL1AQ9BXW6 950 aa16.36■□□□□ 0.21
USP48-210ENST00000489108 ZYG11BQ9C0D3 744 aa16.36■□□□□ 0.21
USP48-210ENST00000489108 B3GNT4Q9C0J1 378 aa16.36■□□□□ 0.21
USP48-210ENST00000489108 LRIT1Q9P2V4 623 aa16.36■□□□□ 0.21
USP48-210ENST00000489108 TUBD1Q9UJT1 453 aa16.36■□□□□ 0.21
USP48-210ENST00000489108 ANAPC2Q9UJX6 822 aa16.36■□□□□ 0.21
USP48-210ENST00000489108 PCDHGC3Q9UN70 934 aa16.36■□□□□ 0.21
USP48-210ENST00000489108 NBPF19A0A087WUL8 3843 aa16.36■□□□□ 0.21
USP48-210ENST00000489108 NOTCH2Q04721 2471 aa16.35■□□□□ 0.21
USP48-210ENST00000489108 STMND1H3BQB6 276 aa16.35■□□□□ 0.21
USP48-210ENST00000489108 PSMA7O14818 248 aa16.35■□□□□ 0.21
USP48-210ENST00000489108 GSRP00390 522 aa16.35■□□□□ 0.21
USP48-210ENST00000489108 F9P00740 461 aa16.35■□□□□ 0.21
USP48-210ENST00000489108 TNFP01375 233 aa16.35■□□□□ 0.21
USP48-210ENST00000489108 TIMP2P16035 220 aa16.35■□□□□ 0.21
USP48-210ENST00000489108 CD44P16070 742 aaKnown RBP16.35■□□□□ 0.21
USP48-210ENST00000489108 PNLIPP16233 465 aa16.35■□□□□ 0.21
USP48-210ENST00000489108 HTR1BP28222 390 aa16.35■□□□□ 0.21
USP48-210ENST00000489108 CCR10P46092 362 aa16.35■□□□□ 0.21
USP48-210ENST00000489108 ARSDP51689 593 aa16.35■□□□□ 0.21
USP48-210ENST00000489108 ARHGEF7Q14155 803 aa16.35■□□□□ 0.21
USP48-210ENST00000489108 INPP5AQ14642 412 aa16.35■□□□□ 0.21
USP48-210ENST00000489108 NFATC4Q14934 902 aa16.35■□□□□ 0.21
USP48-210ENST00000489108 POLD3Q15054 466 aaPredicted RBP16.35■□□□□ 0.21
USP48-210ENST00000489108 ARHGAP44Q17R89 818 aa16.35■□□□□ 0.21
USP48-210ENST00000489108 PTPN20Q4JDL3 420 aa16.35■□□□□ 0.21
USP48-210ENST00000489108 ATXN7L2Q5T6C5 722 aaPredicted RBP16.35■□□□□ 0.21
USP48-210ENST00000489108 TRIM59Q8IWR1 403 aa16.35■□□□□ 0.21
USP48-210ENST00000489108 ARHGEF2Q92974 986 aaKnown RBP16.35■□□□□ 0.21
USP48-210ENST00000489108 DHTKD1Q96HY7 919 aaPredicted RBP16.35■□□□□ 0.21
USP48-210ENST00000489108 RBM15Q96T37 977 aaKnown RBP eCLIP16.35■□□□□ 0.21
USP48-210ENST00000489108 SYNCQ9H7C4 482 aa16.35■□□□□ 0.21
USP48-210ENST00000489108 ZNF71Q9NQZ8 489 aaPredicted RBP16.35■□□□□ 0.21
USP48-210ENST00000489108 KLQ9UEF7 1012 aa16.35■□□□□ 0.21
USP48-210ENST00000489108 STAP1Q9ULZ2 295 aa16.35■□□□□ 0.21
USP48-210ENST00000489108 OR1A2Q9Y585 309 aa16.35■□□□□ 0.21
USP48-210ENST00000489108 PAXBP1Q9Y5B6 917 aa16.35■□□□□ 0.21
USP48-210ENST00000489108 B4GAT1O43505 415 aa16.34■□□□□ 0.21
USP48-210ENST00000489108 LIFP15018 202 aa16.34■□□□□ 0.21
USP48-210ENST00000489108 ATP1A2P50993 1020 aa16.34■□□□□ 0.21
USP48-210ENST00000489108 SNX16P57768 344 aa16.34■□□□□ 0.21
USP48-210ENST00000489108 B4GALNT1Q00973 533 aa16.34■□□□□ 0.21
USP48-210ENST00000489108 ACBD5Q5T8D3 534 aaPredicted RBP16.34■□□□□ 0.21
USP48-210ENST00000489108 ENOSF1Q7L5Y1 443 aa16.34■□□□□ 0.21
USP48-210ENST00000489108 TAF8Q7Z7C8 310 aa16.34■□□□□ 0.21
USP48-210ENST00000489108 IL22RA1Q8N6P7 574 aa16.34■□□□□ 0.21
USP48-210ENST00000489108 SPATA20Q8TB22 786 aa16.34■□□□□ 0.21
USP48-210ENST00000489108 SMARCE1Q969G3 411 aa16.34■□□□□ 0.21
USP48-210ENST00000489108 HAPLN3Q96S86 360 aa16.34■□□□□ 0.21
USP48-210ENST00000489108 RDH14Q9HBH5 336 aa16.34■□□□□ 0.21
USP48-210ENST00000489108 LRRC4CQ9HCJ2 640 aa16.34■□□□□ 0.21
USP48-210ENST00000489108 NDFIP2Q9NV92 336 aa16.34■□□□□ 0.21
USP48-210ENST00000489108 AKAP7Q9P0M2 348 aaPredicted RBP16.34■□□□□ 0.21
USP48-210ENST00000489108 PLAAQ9Y263 795 aa16.34■□□□□ 0.21
USP48-210ENST00000489108 ZDHHC9Q9Y397 364 aa16.34■□□□□ 0.21
USP48-210ENST00000489108 ARHGEF17Q96PE2 2063 aaPredicted RBP16.34■□□□□ 0.21
USP48-210ENST00000489108 SMC2O95347 1197 aa16.33■□□□□ 0.2
USP48-210ENST00000489108 FGF3P11487 239 aaPredicted RBP16.33■□□□□ 0.2
USP48-210ENST00000489108 STIM1Q13586 685 aa16.33■□□□□ 0.2
USP48-210ENST00000489108 HLTFQ14527 1009 aaKnown RBP eCLIP16.33■□□□□ 0.2
USP48-210ENST00000489108 SLC25A52Q3SY17 297 aa16.33■□□□□ 0.2
USP48-210ENST00000489108 TMEM52BQ4KMG9 183 aa16.33■□□□□ 0.2
USP48-210ENST00000489108 C14orf28Q4W4Y0 310 aa16.33■□□□□ 0.2
USP48-210ENST00000489108 EFHC2Q5JST6 749 aa16.33■□□□□ 0.2
USP48-210ENST00000489108 TTI2Q6NXR4 508 aa16.33■□□□□ 0.2
USP48-210ENST00000489108 PIM3Q86V86 326 aa16.33■□□□□ 0.2
USP48-210ENST00000489108 IRF2BP1Q8IU81 584 aa16.33■□□□□ 0.2
USP48-210ENST00000489108 NETO2Q8NC67 525 aa16.33■□□□□ 0.2
USP48-210ENST00000489108 PMEPA1Q969W9 287 aa16.33■□□□□ 0.2
USP48-210ENST00000489108 PDXPQ96GD0 296 aa16.33■□□□□ 0.2
USP48-210ENST00000489108 WDR92Q96MX6 357 aa16.33■□□□□ 0.2
USP48-210ENST00000489108 TAAR9Q96RI9 348 aa16.33■□□□□ 0.2
USP48-210ENST00000489108 CRACR2AQ9BSW2 395 aa16.33■□□□□ 0.2
USP48-210ENST00000489108 PLCB1Q9NQ66 1216 aa16.33■□□□□ 0.2
USP48-210ENST00000489108 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.33■□□□□ 0.2
USP48-210ENST00000489108 ICE1Q9Y2F5 2266 aa16.33■□□□□ 0.2
USP48-210ENST00000489108 MYO9AB2RTY4 2548 aa16.33■□□□□ 0.2
USP48-210ENST00000489108 CXorf51AA0A1B0GTR3 108 aa16.32■□□□□ 0.2
USP48-210ENST00000489108 B4DGG1 531 aa16.32■□□□□ 0.2
USP48-210ENST00000489108 UGT1A3P35503 534 aa16.32■□□□□ 0.2
USP48-210ENST00000489108 GEMIN4P57678 1058 aaKnown RBP16.32■□□□□ 0.2
USP48-210ENST00000489108 OR1D5P58170 312 aa16.32■□□□□ 0.2
USP48-210ENST00000489108 APBA1Q02410 837 aa16.32■□□□□ 0.2
USP48-210ENST00000489108 AMZ1Q400G9 498 aa16.32■□□□□ 0.2
USP48-210ENST00000489108 MAP9Q49MG5 647 aa16.32■□□□□ 0.2
USP48-210ENST00000489108 KLHL10Q6JEL2 608 aa16.32■□□□□ 0.2
USP48-210ENST00000489108 ZDHHC17Q8IUH5 632 aa16.32■□□□□ 0.2
USP48-210ENST00000489108 FMR1NBQ8N0W7 255 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms