RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 EIF4A3P38919 411 aaKnown RBP18.62■□□□□ 0.57
HDAC6-231ENST00000488905 ZNF143P52747 638 aaPredicted RBP18.62■□□□□ 0.57
HDAC6-231ENST00000488905 ADKP55263 362 aaKnown RBP18.62■□□□□ 0.57
HDAC6-231ENST00000488905 YBEYP58557 167 aaPredicted RBP18.62■□□□□ 0.57
HDAC6-231ENST00000488905 ELP6Q0PNE2 266 aa18.62■□□□□ 0.57
HDAC6-231ENST00000488905 SERINC3Q13530 473 aa18.62■□□□□ 0.57
HDAC6-231ENST00000488905 SYCP1Q15431 976 aa18.62■□□□□ 0.57
HDAC6-231ENST00000488905 FAXCQ5TGI0 409 aa18.62■□□□□ 0.57
HDAC6-231ENST00000488905 SCYL2Q6P3W7 929 aa18.62■□□□□ 0.57
HDAC6-231ENST00000488905 PCSK4Q6UW60 755 aa18.62■□□□□ 0.57
HDAC6-231ENST00000488905 MCEEQ96PE7 176 aa18.62■□□□□ 0.57
HDAC6-231ENST00000488905 NCAPGQ9BPX3 1015 aa18.62■□□□□ 0.57
HDAC6-231ENST00000488905 CPEB1Q9BZB8 566 aaKnown RBP18.62■□□□□ 0.57
HDAC6-231ENST00000488905 CLPBQ9H078 707 aa18.62■□□□□ 0.57
HDAC6-231ENST00000488905 CATSPERBQ9H7T0 1116 aa18.62■□□□□ 0.57
HDAC6-231ENST00000488905 CPNE5Q9HCH3 593 aa18.62■□□□□ 0.57
HDAC6-231ENST00000488905 SEPT11Q9NVA2 429 aaKnown RBP18.62■□□□□ 0.57
HDAC6-231ENST00000488905 FZD10Q9ULW2 581 aa18.62■□□□□ 0.57
HDAC6-231ENST00000488905 AHCTF1Q8WYP5 2266 aa18.61■□□□□ 0.57
HDAC6-231ENST00000488905 ARHGEF17Q96PE2 2063 aaPredicted RBP18.61■□□□□ 0.57
HDAC6-231ENST00000488905 ANKRD62A6NC57 917 aa18.61■□□□□ 0.57
HDAC6-231ENST00000488905 WASH4PA8MWX3 477 aa18.61■□□□□ 0.57
HDAC6-231ENST00000488905 INSIG1O15503 277 aa18.61■□□□□ 0.57
HDAC6-231ENST00000488905 FGF10O15520 208 aaPredicted RBP18.61■□□□□ 0.57
HDAC6-231ENST00000488905 PIGNO95427 931 aa18.61■□□□□ 0.57
HDAC6-231ENST00000488905 TIMP2P16035 220 aa18.61■□□□□ 0.57
HDAC6-231ENST00000488905 TSHRP16473 764 aa18.61■□□□□ 0.57
HDAC6-231ENST00000488905 XPAP23025 273 aaPredicted RBP18.61■□□□□ 0.57
HDAC6-231ENST00000488905 SUOXP51687 545 aa18.61■□□□□ 0.57
HDAC6-231ENST00000488905 PDX1P52945 283 aa18.61■□□□□ 0.57
HDAC6-231ENST00000488905 COPB1P53618 953 aaKnown RBP18.61■□□□□ 0.57
HDAC6-231ENST00000488905 AIF1P55008 147 aa18.61■□□□□ 0.57
HDAC6-231ENST00000488905 PPARDQ03181 441 aa18.61■□□□□ 0.57
HDAC6-231ENST00000488905 C1QBPQ07021 282 aaKnown RBP18.61■□□□□ 0.57
HDAC6-231ENST00000488905 TMEM52BQ4KMG9 183 aa18.61■□□□□ 0.57
HDAC6-231ENST00000488905 UMODL1-AS1Q8N2C9 162 aa18.61■□□□□ 0.57
HDAC6-231ENST00000488905 NEK11Q8NG66 645 aa18.61■□□□□ 0.57
HDAC6-231ENST00000488905 WDR48Q8TAF3 677 aa18.61■□□□□ 0.57
HDAC6-231ENST00000488905 PCMTD1Q96MG8 357 aaPredicted RBP18.61■□□□□ 0.57
HDAC6-231ENST00000488905 CCDC3Q9BQI4 270 aa18.61■□□□□ 0.57
HDAC6-231ENST00000488905 DPH1Q9BZG8 443 aa18.61■□□□□ 0.57
HDAC6-231ENST00000488905 FANCLQ9NW38 375 aa18.61■□□□□ 0.57
HDAC6-231ENST00000488905 COQ6Q9Y2Z9 468 aa18.61■□□□□ 0.57
HDAC6-231ENST00000488905 PCDHGA8Q9Y5G5 932 aa18.61■□□□□ 0.57
HDAC6-231ENST00000488905 FLNBO75369 2602 aaKnown RBP18.61■□□□□ 0.57
HDAC6-231ENST00000488905 TENM4Q6N022 2769 aa18.6■□□□□ 0.57
HDAC6-231ENST00000488905 TSPAN11A1L157 253 aa18.6■□□□□ 0.57
HDAC6-231ENST00000488905 LGALS16A8MUM7 142 aa18.6■□□□□ 0.57
HDAC6-231ENST00000488905 KLK10O43240 276 aa18.6■□□□□ 0.57
HDAC6-231ENST00000488905 CELA2BP08218 269 aaPredicted RBP18.6■□□□□ 0.57
HDAC6-231ENST00000488905 RBMS1P29558 406 aaKnown RBP18.6■□□□□ 0.57
HDAC6-231ENST00000488905 RPL7AP62424 266 aaKnown RBP18.6■□□□□ 0.57
HDAC6-231ENST00000488905 LRRC14Q15048 493 aa18.6■□□□□ 0.57
HDAC6-231ENST00000488905 ESRP1Q6NXG1 681 aaKnown RBP18.6■□□□□ 0.57
HDAC6-231ENST00000488905 DNAAF5Q86Y56 855 aa18.6■□□□□ 0.57
HDAC6-231ENST00000488905 ZNF843Q8N446 348 aa18.6■□□□□ 0.57
HDAC6-231ENST00000488905 FSTL5Q8N475 847 aaPredicted RBP18.6■□□□□ 0.57
HDAC6-231ENST00000488905 CNPY3Q9BT09 278 aa18.6■□□□□ 0.57
HDAC6-231ENST00000488905 UBA2Q9UBT2 640 aaPredicted RBP18.6■□□□□ 0.57
HDAC6-231ENST00000488905 PIEZO2Q9H5I5 2752 aa18.59■□□□□ 0.57
HDAC6-231ENST00000488905 BOD1L1Q8NFC6 3051 aa18.59■□□□□ 0.57
HDAC6-231ENST00000488905 CASC3O15234 703 aaKnown RBP18.59■□□□□ 0.57
HDAC6-231ENST00000488905 YY2O15391 372 aa18.59■□□□□ 0.57
HDAC6-231ENST00000488905 C6P13671 934 aa18.59■□□□□ 0.57
HDAC6-231ENST00000488905 PEX5P50542 639 aa18.59■□□□□ 0.57
HDAC6-231ENST00000488905 BLKP51451 505 aa18.59■□□□□ 0.57
HDAC6-231ENST00000488905 HK3P52790 923 aa18.59■□□□□ 0.57
HDAC6-231ENST00000488905 SKOR1P84550 965 aa18.59■□□□□ 0.57
HDAC6-231ENST00000488905 RHDQ02161 417 aa18.59■□□□□ 0.57
HDAC6-231ENST00000488905 SPIDRQ14159 915 aa18.59■□□□□ 0.57
HDAC6-231ENST00000488905 GRM3Q14832 879 aa18.59■□□□□ 0.57
HDAC6-231ENST00000488905 ELOCQ15369 112 aa18.59■□□□□ 0.57
HDAC6-231ENST00000488905 CYTH1Q15438 398 aa18.59■□□□□ 0.57
HDAC6-231ENST00000488905 PPP1R15BQ5SWA1 713 aa18.59■□□□□ 0.57
HDAC6-231ENST00000488905 ARHGAP40Q5TG30 622 aa18.59■□□□□ 0.57
HDAC6-231ENST00000488905 RBM43Q6ZSC3 357 aaKnown RBP18.59■□□□□ 0.57
HDAC6-231ENST00000488905 ARL10Q8N8L6 244 aa18.59■□□□□ 0.57
HDAC6-231ENST00000488905 KYQ8NBH2 561 aa18.59■□□□□ 0.57
HDAC6-231ENST00000488905 PCDH19Q8TAB3 1148 aa18.59■□□□□ 0.57
HDAC6-231ENST00000488905 HCAR2Q8TDS4 363 aa18.59■□□□□ 0.57
HDAC6-231ENST00000488905 PRR11Q96HE9 360 aaPredicted RBP18.59■□□□□ 0.57
HDAC6-231ENST00000488905 SLC46A1Q96NT5 459 aa18.59■□□□□ 0.57
HDAC6-231ENST00000488905 AGPAT1Q99943 283 aa18.59■□□□□ 0.57
HDAC6-231ENST00000488905 SYNDIG1Q9H7V2 258 aa18.59■□□□□ 0.57
HDAC6-231ENST00000488905 PDFQ9HBH1 243 aa18.59■□□□□ 0.57
HDAC6-231ENST00000488905 PCDH12Q9NPG4 1184 aa18.59■□□□□ 0.57
HDAC6-231ENST00000488905 PADI4Q9UM07 663 aa18.59■□□□□ 0.57
HDAC6-231ENST00000488905 DOLKQ9UPQ8 538 aa18.59■□□□□ 0.57
HDAC6-231ENST00000488905 BSNQ9UPA5 3926 aa18.58■□□□□ 0.57
HDAC6-231ENST00000488905 PMS2P1A4D2B8 440 aa18.58■□□□□ 0.56
HDAC6-231ENST00000488905 CDRT15L2A8MXV6 281 aa18.58■□□□□ 0.56
HDAC6-231ENST00000488905 ALPIP09923 528 aa18.58■□□□□ 0.56
HDAC6-231ENST00000488905 DESP17661 470 aa18.58■□□□□ 0.56
HDAC6-231ENST00000488905 HTR7P34969 479 aa18.58■□□□□ 0.56
HDAC6-231ENST00000488905 MMP12P39900 470 aa18.58■□□□□ 0.56
HDAC6-231ENST00000488905 TPI1P60174 286 aa18.58■□□□□ 0.56
HDAC6-231ENST00000488905 NFATC4Q14934 902 aa18.58■□□□□ 0.56
HDAC6-231ENST00000488905 UGP2Q16851 508 aa18.58■□□□□ 0.56
HDAC6-231ENST00000488905 ALG11Q2TAA5 492 aa18.58■□□□□ 0.56
HDAC6-231ENST00000488905 WSCD2Q2TBF2 565 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms