RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 CCDC173Q0VFZ6 552 aa18.82■□□□□ 0.6
PTCD3-217ENST00000488801 TRAF2Q12933 501 aa18.82■□□□□ 0.6
PTCD3-217ENST00000488801 DUOXA1Q1HG43 343 aa18.82■□□□□ 0.6
PTCD3-217ENST00000488801 KIAA1161Q6NSJ0 714 aa18.82■□□□□ 0.6
PTCD3-217ENST00000488801 HORMAD1Q86X24 394 aa18.82■□□□□ 0.6
PTCD3-217ENST00000488801 ZCCHC9Q8N567 271 aaKnown RBP18.82■□□□□ 0.6
PTCD3-217ENST00000488801 CEP76Q8TAP6 659 aa18.82■□□□□ 0.6
PTCD3-217ENST00000488801 ACTL9Q8TC94 416 aa18.82■□□□□ 0.6
PTCD3-217ENST00000488801 SEMA3CQ99985 751 aa18.82■□□□□ 0.6
PTCD3-217ENST00000488801 HINFPQ9BQA5 517 aa18.82■□□□□ 0.6
PTCD3-217ENST00000488801 TLR10Q9BXR5 811 aa18.82■□□□□ 0.6
PTCD3-217ENST00000488801 SCUBE2Q9NQ36 999 aa18.82■□□□□ 0.6
PTCD3-217ENST00000488801 ITM2BQ9Y287 266 aa18.82■□□□□ 0.6
PTCD3-217ENST00000488801 DCHS1Q96JQ0 3298 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 TBC1D3DA0A087WVF3 549 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 TBC1D3IA0A087WXS9 549 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 TBC1D3EA0A087X179 549 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 TBC1D3KA0A087X1G2 549 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 A0A1B0GTW7 788 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 LNP1A1A4G5 178 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 TBC1D3FA6NER0 549 aaPredicted RBP18.81■□□□□ 0.6
PTCD3-217ENST00000488801 FAM47DPA6NHR8 397 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 HACD1B0YJ81 288 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 TBC1D3LB9A6J9 549 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 TSPAN6O43657 245 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 RNGTTO60942 597 aaKnown RBP18.81■□□□□ 0.6
PTCD3-217ENST00000488801 PTMAP06454 111 aaKnown RBP18.81■□□□□ 0.6
PTCD3-217ENST00000488801 MMP2P08253 660 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 TBC1D3HP0C7X1 549 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 CES1P23141 567 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 PTPN3P26045 913 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 MMP12P39900 470 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 OTUD4Q01804 1114 aaKnown RBP18.81■□□□□ 0.6
PTCD3-217ENST00000488801 DSC2Q02487 901 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 BCL2L1Q07817 233 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 NIPAL4Q0D2K0 466 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 AP1B1Q10567 949 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 WASHC5Q12768 1159 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 SF3A2Q15428 464 aaKnown RBP18.81■□□□□ 0.6
PTCD3-217ENST00000488801 UGP2Q16851 508 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 ZNF284Q2VY69 593 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 SLC45A4Q5BKX6 768 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 TRIM61Q5EBN2 209 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 TBC1D3GQ6DHY5 549 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 TBC1D3CQ6IPX1 549 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 TBC1D3Q8IZP1 549 aaPredicted RBP18.81■□□□□ 0.6
PTCD3-217ENST00000488801 TMEM145Q8NBT3 493 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 TFB1MQ8WVM0 346 aaKnown RBP18.81■□□□□ 0.6
PTCD3-217ENST00000488801 TADA1Q96BN2 335 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 HAUS1Q96CS2 278 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 CARD9Q9H257 536 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 DMTF1Q9Y222 760 aa18.81■□□□□ 0.6
PTCD3-217ENST00000488801 A0A1W2PQU0 124 aa18.8■□□□□ 0.6
PTCD3-217ENST00000488801 BCAT2O15382 392 aaPredicted RBP18.8■□□□□ 0.6
PTCD3-217ENST00000488801 TJP3O95049 919 aa18.8■□□□□ 0.6
PTCD3-217ENST00000488801 JCHAINP01591 159 aa18.8■□□□□ 0.6
PTCD3-217ENST00000488801 CETN2P41208 172 aa18.8■□□□□ 0.6
PTCD3-217ENST00000488801 GRIA4P48058 902 aa18.8■□□□□ 0.6
PTCD3-217ENST00000488801 FGL2Q14314 439 aa18.8■□□□□ 0.6
PTCD3-217ENST00000488801 SLC14A2Q15849 920 aa18.8■□□□□ 0.6
PTCD3-217ENST00000488801 TMEM52BQ4KMG9 183 aa18.8■□□□□ 0.6
PTCD3-217ENST00000488801 TEX44Q53QW1 395 aa18.8■□□□□ 0.6
PTCD3-217ENST00000488801 LRRC73Q5JTD7 316 aa18.8■□□□□ 0.6
PTCD3-217ENST00000488801 RGL4Q8IZJ4 473 aa18.8■□□□□ 0.6
PTCD3-217ENST00000488801 ASB12Q8WXK4 309 aa18.8■□□□□ 0.6
PTCD3-217ENST00000488801 TM9SF3Q9HD45 589 aa18.8■□□□□ 0.6
PTCD3-217ENST00000488801 PPIL1Q9Y3C6 166 aa18.8■□□□□ 0.6
PTCD3-217ENST00000488801 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.8■□□□□ 0.6
PTCD3-217ENST00000488801 PLXNB3Q9ULL4 1909 aa18.8■□□□□ 0.6
PTCD3-217ENST00000488801 A0A1W2PQ67 120 aa18.79■□□□□ 0.6
PTCD3-217ENST00000488801 A0A1W2PR77 199 aa18.79■□□□□ 0.6
PTCD3-217ENST00000488801 RIOK3O14730 519 aaKnown RBP18.79■□□□□ 0.6
PTCD3-217ENST00000488801 MTSS1O43312 755 aa18.79■□□□□ 0.6
PTCD3-217ENST00000488801 PGLSO95336 258 aa18.79■□□□□ 0.6
PTCD3-217ENST00000488801 RACK1P63244 317 aaKnown RBP18.79■□□□□ 0.6
PTCD3-217ENST00000488801 IRX4P78413 519 aa18.79■□□□□ 0.6
PTCD3-217ENST00000488801 BNC1Q01954 994 aa18.79■□□□□ 0.6
PTCD3-217ENST00000488801 ELP6Q0PNE2 266 aa18.79■□□□□ 0.6
PTCD3-217ENST00000488801 RALGDSQ12967 914 aa18.79■□□□□ 0.6
PTCD3-217ENST00000488801 SETMARQ53H47 684 aaPredicted RBP18.79■□□□□ 0.6
PTCD3-217ENST00000488801 SEL1L3Q68CR1 1132 aa18.79■□□□□ 0.6
PTCD3-217ENST00000488801 NAPEPLDQ6IQ20 393 aa18.79■□□□□ 0.6
PTCD3-217ENST00000488801 B4GALNT4Q76KP1 1039 aa18.79■□□□□ 0.6
PTCD3-217ENST00000488801 ZC3H18Q86VM9 953 aaKnown RBP18.79■□□□□ 0.6
PTCD3-217ENST00000488801 SNX19Q92543 992 aa18.79■□□□□ 0.6
PTCD3-217ENST00000488801 IMP4Q96G21 291 aaKnown RBP18.79■□□□□ 0.6
PTCD3-217ENST00000488801 TEKT5Q96M29 485 aa18.79■□□□□ 0.6
PTCD3-217ENST00000488801 MCCC1Q96RQ3 725 aaPredicted RBP18.79■□□□□ 0.6
PTCD3-217ENST00000488801 C1QTNF2Q9BXJ5 285 aa18.79■□□□□ 0.6
PTCD3-217ENST00000488801 TDRD1Q9BXT4 1180 aaKnown RBP18.79■□□□□ 0.6
PTCD3-217ENST00000488801 CEP41Q9BYV8 373 aa18.79■□□□□ 0.6
PTCD3-217ENST00000488801 PCDH12Q9NPG4 1184 aa18.79■□□□□ 0.6
PTCD3-217ENST00000488801 RXFP3Q9NSD7 469 aa18.79■□□□□ 0.6
PTCD3-217ENST00000488801 HAUS2Q9NVX0 235 aa18.79■□□□□ 0.6
PTCD3-217ENST00000488801 SLC6A14Q9UN76 642 aa18.79■□□□□ 0.6
PTCD3-217ENST00000488801 PCDHGC4Q9Y5F7 938 aa18.79■□□□□ 0.6
PTCD3-217ENST00000488801 TCRBV7S2A1N4TA0A589 114 aa18.78■□□□□ 0.6
PTCD3-217ENST00000488801 PRR5-ARHGAP8B1AHC4 643 aa18.78■□□□□ 0.6
PTCD3-217ENST00000488801 WNT9AO14904 365 aa18.78■□□□□ 0.6
PTCD3-217ENST00000488801 KHNYNO15037 678 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms