RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 DDX3XO00571 662 aaKnown RBP eCLIP13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 INSIG1O15503 277 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 DAPK3O43293 454 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 ATMINO43313 823 aaPredicted RBP13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 PALMO75781 387 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 NEBLO76041 1014 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 PIGNO95427 931 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 ERCC2P18074 760 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 MIPP30301 263 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 PCK1P35558 622 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 EIF2S3P41091 472 aaKnown RBP13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 PAPOLAP51003 745 aaKnown RBP13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 SEMG2Q02383 582 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 NSUN2Q08J23 767 aaKnown RBP eCLIP13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 LRRC14Q15048 493 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 AGERQ15109 404 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 CA9Q16790 459 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 KLHL40Q2TBA0 621 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 CFAP58Q5T655 872 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 E4F1Q66K89 784 aaPredicted RBP13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 CYP4V2Q6ZWL3 525 aaPredicted RBP13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 PHACTR4Q8IZ21 702 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 LZTR1Q8N653 840 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 LMX1AQ8TE12 382 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 GLMNQ92990 594 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 GRAMD1AQ96CP6 724 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 CELF6Q96J87 481 aaKnown RBP13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 EXOC2Q96KP1 924 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 PEBP4Q96S96 227 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 IL12RB2Q99665 862 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 WRAP53Q9BUR4 548 aaKnown RBP13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 SLC13A1Q9BZW2 595 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 ABCG4Q9H172 646 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 ATP13A3Q9H7F0 1226 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 ZWILCHQ9H900 591 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 PCDH12Q9NPG4 1184 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 CNOT8Q9UFF9 292 aaKnown RBP13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 APOBEC3BQ9UH17 382 aaKnown RBP13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 PCSK1NQ9UHG2 260 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 BZW2Q9Y6E2 419 aaKnown RBP13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 LOC400499M0QZD8 3231 aa13.19□□□□□ -0.3
ATPAF2-207ENST00000488753 ATRXP46100 2492 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 EME2A4GXA9 379 aaPredicted RBP13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 RRP8O43159 456 aaKnown RBP13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 TLX3O43711 291 aaPredicted RBP13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 LRCH4O75427 683 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 HTR1BP28222 390 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 SERPINA4P29622 427 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 ACTN2P35609 894 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 EIF4A3P38919 411 aaKnown RBP13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 MMP12P39900 470 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 ABCG1P45844 678 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 RPIAP49247 311 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 BLKP51451 505 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 PPARDQ03181 441 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 IL10RBQ08334 325 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 NR1I3Q14994 352 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 NR0B2Q15466 257 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 PRRT3Q5FWE3 981 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 LRRC73Q5JTD7 316 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 CAVIN1Q6NZI2 390 aaKnown RBP13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 KDM7AQ6ZMT4 941 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 LRRC69Q6ZNQ3 347 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 ARHGAP12Q8IWW6 846 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 SDR16C5Q8N3Y7 309 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 NETO2Q8NC67 525 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 TPCN2Q8NHX9 752 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 IFI44Q8TCB0 444 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 FGF11Q92914 225 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 NAT6Q93015 286 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 ZNF653Q96CK0 615 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 ECHDC3Q96DC8 303 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 NAP1L5Q96NT1 182 aaPredicted RBP13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 KCTD15Q96SI1 283 aaPredicted RBP13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 FUCA2Q9BTY2 467 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 CINPQ9BW66 212 aaPredicted RBP13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 BOCQ9BWV1 1114 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 TRIM7Q9C029 511 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 ISCUQ9H1K1 167 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 CAAP1Q9H8G2 361 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 MBNL1Q9NR56 388 aaKnown RBP13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 ATP8A1Q9Y2Q0 1164 aa13.18□□□□□ -0.3
ATPAF2-207ENST00000488753 ADAMTS20P59510 1910 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 BRINP1O60477 761 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 BUB1BO60566 1050 aaPredicted RBP13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 DXOO77932 396 aaKnown RBP13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 SERPINC1P01008 464 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 C6P13671 934 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 ITIH2P19823 946 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 PTMSP20962 102 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 RENBPP51606 427 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 POLR2LP62875 67 aaKnown RBP13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 DPYSQ14117 519 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 IQCB1Q15051 598 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 IRF4Q15306 451 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 DPYSL2Q16555 572 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 WSCD2Q2TBF2 565 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 DEFB133Q30KQ1 61 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 TBC1D25Q3MII6 688 aa13.17□□□□□ -0.3
ATPAF2-207ENST00000488753 BOLA3Q53S33 107 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms