RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 CDH12P55289 794 aa3.4□□□□□ -1.87
CD46-215ENST00000488596 PTGR1Q14914 329 aa3.4□□□□□ -1.87
CD46-215ENST00000488596 PPP2R5BQ15173 497 aa3.4□□□□□ -1.87
CD46-215ENST00000488596 KRTAP27-1Q3LI81 207 aa3.4□□□□□ -1.87
CD46-215ENST00000488596 Q5PR19 223 aa3.4□□□□□ -1.87
CD46-215ENST00000488596 PRAMEF19Q5SWL8 479 aa3.4□□□□□ -1.87
CD46-215ENST00000488596 ATG9BQ674R7 924 aa3.4□□□□□ -1.87
CD46-215ENST00000488596 HEPHL1Q6MZM0 1159 aa3.4□□□□□ -1.87
CD46-215ENST00000488596 LRRC8EQ6NSJ5 796 aa3.4□□□□□ -1.87
CD46-215ENST00000488596 SLC46A3Q7Z3Q1 461 aa3.4□□□□□ -1.87
CD46-215ENST00000488596 TBC1D26Q86UD7 250 aa3.4□□□□□ -1.87
CD46-215ENST00000488596 TDRPQ86YL5 185 aa3.4□□□□□ -1.87
CD46-215ENST00000488596 TMC8Q8IU68 726 aa3.4□□□□□ -1.87
CD46-215ENST00000488596 CAMK1DQ8IU85 385 aa3.4□□□□□ -1.87
CD46-215ENST00000488596 ADHFE1Q8IWW8 467 aa3.4□□□□□ -1.87
CD46-215ENST00000488596 DHX40Q8IX18 779 aaKnown RBP3.4□□□□□ -1.87
CD46-215ENST00000488596 ZDHHC23Q8IYP9 409 aa3.4□□□□□ -1.87
CD46-215ENST00000488596 CADM4Q8NFZ8 388 aa3.4□□□□□ -1.87
CD46-215ENST00000488596 TMEM170AQ8WVE7 144 aa3.4□□□□□ -1.87
CD46-215ENST00000488596 ASB5Q8WWX0 329 aa3.4□□□□□ -1.87
CD46-215ENST00000488596 RNF183Q96D59 192 aa3.4□□□□□ -1.87
CD46-215ENST00000488596 PERPQ96FX8 193 aa3.4□□□□□ -1.87
CD46-215ENST00000488596 ZNF333Q96JL9 665 aa3.4□□□□□ -1.87
CD46-215ENST00000488596 BARD1Q99728 777 aaKnown RBP3.4□□□□□ -1.87
CD46-215ENST00000488596 PIP5K1AQ99755 562 aa3.4□□□□□ -1.87
CD46-215ENST00000488596 NPFFR1Q9GZQ6 430 aa3.4□□□□□ -1.87
CD46-215ENST00000488596 BLOC1S4Q9NUP1 217 aa3.4□□□□□ -1.87
CD46-215ENST00000488596 PGPEP1LA6NFU8 196 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 BECN2A8MW95 431 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 H0YGN5 161 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 I6L893 689 aaPredicted RBP3.39□□□□□ -1.87
CD46-215ENST00000488596 BAIAP3O94812 1187 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 HSPA1AP0DMV8 641 aaKnown RBP3.39□□□□□ -1.87
CD46-215ENST00000488596 HSPA1BP0DMV9 641 aaKnown RBP3.39□□□□□ -1.87
CD46-215ENST00000488596 TFPIP10646 304 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 SRD5A1P18405 259 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 CPOXP36551 454 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 GPR12P47775 334 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 RFX5P48382 616 aaPredicted RBP3.39□□□□□ -1.87
CD46-215ENST00000488596 PMS2P54278 862 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 P2RX3P56373 397 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 RPS3AP61247 264 aaKnown RBP3.39□□□□□ -1.87
CD46-215ENST00000488596 ZXDBP98169 803 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 PPATQ06203 517 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 TMEM115Q12893 351 aaPredicted RBP3.39□□□□□ -1.87
CD46-215ENST00000488596 GRIK3Q13003 919 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 TRAF1Q13077 416 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 LPIN1Q14693 890 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 PRTGQ2VWP7 1150 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 SLC45A4Q5BKX6 768 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 ZNF628Q5EBL2 1059 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 CPLX2Q6PUV4 134 aaKnown RBP3.39□□□□□ -1.87
CD46-215ENST00000488596 PARM1Q6UWI2 310 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 TMTC3Q6ZXV5 915 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 NOXA1Q86UR1 476 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 MCPH1Q8NEM0 835 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 GPT2Q8TD30 523 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 PABPC5Q96DU9 382 aaKnown RBP3.39□□□□□ -1.87
CD46-215ENST00000488596 ZC3HAV1LQ96H79 300 aaKnown RBP3.39□□□□□ -1.87
CD46-215ENST00000488596 ZNF479Q96JC4 524 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 NLRP4Q96MN2 994 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 BBS4Q96RK4 519 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 CHCHD6Q9BRQ6 235 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 RANBP17Q9H2T7 1088 aaKnown RBP3.39□□□□□ -1.87
CD46-215ENST00000488596 KLHL31Q9H511 634 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 TASP1Q9H6P5 420 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 BRF2Q9HAW0 419 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 KRT84Q9NSB2 600 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 SIRT3Q9NTG7 399 aaPredicted RBP3.39□□□□□ -1.87
CD46-215ENST00000488596 SPATS2LQ9NUQ6 558 aaKnown RBP3.39□□□□□ -1.87
CD46-215ENST00000488596 MAP3K20Q9NYL2 800 aaKnown RBP3.39□□□□□ -1.87
CD46-215ENST00000488596 MDFICQ9P1T7 246 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 NDRG3Q9UGV2 375 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 MKLN1Q9UL63 735 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 A4GNTQ9UNA3 340 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.39□□□□□ -1.87
CD46-215ENST00000488596 LSM4Q9Y4Z0 139 aaKnown RBP3.39□□□□□ -1.87
CD46-215ENST00000488596 CAPN7Q9Y6W3 813 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 TCF20Q9UGU0 1960 aaKnown RBP3.39□□□□□ -1.87
CD46-215ENST00000488596 ITIH6Q6UXX5 1313 aa3.39□□□□□ -1.87
CD46-215ENST00000488596 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.38□□□□□ -1.87
CD46-215ENST00000488596 EME2A4GXA9 379 aaPredicted RBP3.38□□□□□ -1.87
CD46-215ENST00000488596 HSPB2A8KAH6 182 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 LACTBL1A8MY62 500 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 NPIPB11E5RHQ5 1161 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 LIASO43766 372 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 RGS11O94810 467 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 TMEM63AO94886 807 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 SYF2O95926 243 aaKnown RBP3.38□□□□□ -1.87
CD46-215ENST00000488596 KLKB1P03952 638 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 CLEC3BP05452 202 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 ZNF8P17098 575 aaPredicted RBP3.38□□□□□ -1.87
CD46-215ENST00000488596 PTPN2P17706 415 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 ITGAXP20702 1163 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 THPOP40225 353 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 PBX3P40426 434 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 EIF3BP55884 814 aaKnown RBP3.38□□□□□ -1.87
CD46-215ENST00000488596 SELENOVP59797 346 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 DCAF7P61962 342 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 ARHGEF6Q15052 776 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms