RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 HS3ST3A1Q9Y663 406 aa17.92■□□□□ 0.46
ITGB1-215ENST00000488494 TRPM6Q9BX84 2022 aa17.92■□□□□ 0.46
ITGB1-215ENST00000488494 TMEM110-MUSTN1A8MSY1 372 aa17.91■□□□□ 0.46
ITGB1-215ENST00000488494 MFSD11O43934 449 aa17.91■□□□□ 0.46
ITGB1-215ENST00000488494 PRKCGP05129 697 aa17.91■□□□□ 0.46
ITGB1-215ENST00000488494 TMEM253P0C7T8 217 aa17.91■□□□□ 0.46
ITGB1-215ENST00000488494 SERPINB6P35237 376 aa17.91■□□□□ 0.46
ITGB1-215ENST00000488494 IGFALSP35858 605 aa17.91■□□□□ 0.46
ITGB1-215ENST00000488494 MMP12P39900 470 aa17.91■□□□□ 0.46
ITGB1-215ENST00000488494 CSNK1DP48730 415 aa17.91■□□□□ 0.46
ITGB1-215ENST00000488494 SUOXP51687 545 aa17.91■□□□□ 0.46
ITGB1-215ENST00000488494 SLC10A7Q0GE19 358 aa17.91■□□□□ 0.46
ITGB1-215ENST00000488494 ELP6Q0PNE2 266 aa17.91■□□□□ 0.46
ITGB1-215ENST00000488494 MMRN1Q13201 1228 aa17.91■□□□□ 0.46
ITGB1-215ENST00000488494 DNAJC3Q13217 504 aa17.91■□□□□ 0.46
ITGB1-215ENST00000488494 FZD2Q14332 565 aa17.91■□□□□ 0.46
ITGB1-215ENST00000488494 ZNF235Q14590 738 aa17.91■□□□□ 0.46
ITGB1-215ENST00000488494 ZNF542PQ5EBM4 170 aa17.91■□□□□ 0.46
ITGB1-215ENST00000488494 ERAP2Q6P179 960 aa17.91■□□□□ 0.46
ITGB1-215ENST00000488494 PAF1Q8N7H5 531 aa17.91■□□□□ 0.46
ITGB1-215ENST00000488494 ZNF599Q96NL3 588 aa17.91■□□□□ 0.46
ITGB1-215ENST00000488494 PSKH2Q96QS6 385 aa17.91■□□□□ 0.46
ITGB1-215ENST00000488494 C1QTNF7Q9BXJ2 289 aa17.91■□□□□ 0.46
ITGB1-215ENST00000488494 DNAJC28Q9NX36 388 aa17.91■□□□□ 0.46
ITGB1-215ENST00000488494 FAM221BA6H8Z2 402 aa17.9■□□□□ 0.46
ITGB1-215ENST00000488494 FFAR2O15552 330 aa17.9■□□□□ 0.46
ITGB1-215ENST00000488494 TM7SF2O76062 418 aa17.9■□□□□ 0.46
ITGB1-215ENST00000488494 PEX11BO96011 259 aa17.9■□□□□ 0.46
ITGB1-215ENST00000488494 DGKAP23743 735 aa17.9■□□□□ 0.46
ITGB1-215ENST00000488494 ACADVLP49748 655 aa17.9■□□□□ 0.46
ITGB1-215ENST00000488494 SCNN1BP51168 640 aa17.9■□□□□ 0.46
ITGB1-215ENST00000488494 TAS2R40P59535 323 aa17.9■□□□□ 0.46
ITGB1-215ENST00000488494 AP1S1P61966 158 aa17.9■□□□□ 0.46
ITGB1-215ENST00000488494 SEMG2Q02383 582 aa17.9■□□□□ 0.46
ITGB1-215ENST00000488494 PDE1CQ14123 709 aaPredicted RBP17.9■□□□□ 0.46
ITGB1-215ENST00000488494 DPYSL3Q14195 570 aa17.9■□□□□ 0.46
ITGB1-215ENST00000488494 IRF4Q15306 451 aa17.9■□□□□ 0.46
ITGB1-215ENST00000488494 UGP2Q16851 508 aa17.9■□□□□ 0.46
ITGB1-215ENST00000488494 TMEM52BQ4KMG9 183 aa17.9■□□□□ 0.46
ITGB1-215ENST00000488494 TPRG1LQ5T0D9 272 aa17.9■□□□□ 0.46
ITGB1-215ENST00000488494 DHRS13Q6UX07 377 aa17.9■□□□□ 0.46
ITGB1-215ENST00000488494 PARGQ86W56 976 aa17.9■□□□□ 0.46
ITGB1-215ENST00000488494 DCP2Q8IU60 420 aaKnown RBP17.9■□□□□ 0.46
ITGB1-215ENST00000488494 CNGA4Q8IV77 575 aa17.9■□□□□ 0.46
ITGB1-215ENST00000488494 HCAR2Q8TDS4 363 aa17.9■□□□□ 0.46
ITGB1-215ENST00000488494 CCDC42Q96M95 316 aa17.9■□□□□ 0.46
ITGB1-215ENST00000488494 CHP1Q99653 195 aa17.9■□□□□ 0.46
ITGB1-215ENST00000488494 NHEJ1Q9H9Q4 299 aaPredicted RBP17.9■□□□□ 0.46
ITGB1-215ENST00000488494 ATP8A1Q9Y2Q0 1164 aa17.9■□□□□ 0.46
ITGB1-215ENST00000488494 COQ6Q9Y2Z9 468 aa17.9■□□□□ 0.46
ITGB1-215ENST00000488494 SPTY2D1-AS1A0A0U1RR47 76 aa17.89■□□□□ 0.45
ITGB1-215ENST00000488494 MAFKO60675 156 aa17.89■□□□□ 0.45
ITGB1-215ENST00000488494 RFPL3O75679 317 aa17.89■□□□□ 0.45
ITGB1-215ENST00000488494 PIAS2O75928 621 aa17.89■□□□□ 0.45
ITGB1-215ENST00000488494 C6P13671 934 aa17.89■□□□□ 0.45
ITGB1-215ENST00000488494 IL4RP24394 825 aa17.89■□□□□ 0.45
ITGB1-215ENST00000488494 RENBPP51606 427 aa17.89■□□□□ 0.45
ITGB1-215ENST00000488494 ARSEP51690 589 aa17.89■□□□□ 0.45
ITGB1-215ENST00000488494 PFN3P60673 137 aa17.89■□□□□ 0.45
ITGB1-215ENST00000488494 BCL2L1Q07817 233 aa17.89■□□□□ 0.45
ITGB1-215ENST00000488494 ATP13A4Q4VNC1 1196 aa17.89■□□□□ 0.45
ITGB1-215ENST00000488494 NCBP2-AS2Q69YL0 99 aa17.89■□□□□ 0.45
ITGB1-215ENST00000488494 PIAS4Q8N2W9 510 aaPredicted RBP17.89■□□□□ 0.45
ITGB1-215ENST00000488494 SLC25A45Q8N413 288 aa17.89■□□□□ 0.45
ITGB1-215ENST00000488494 TP53I13Q8NBR0 393 aaPredicted RBP17.89■□□□□ 0.45
ITGB1-215ENST00000488494 KCTD6Q8NC69 237 aa17.89■□□□□ 0.45
ITGB1-215ENST00000488494 FAM71BQ8TC56 605 aa17.89■□□□□ 0.45
ITGB1-215ENST00000488494 ZCCHC14Q8WYQ9 949 aaKnown RBP17.89■□□□□ 0.45
ITGB1-215ENST00000488494 CENPTQ96BT3 561 aa17.89■□□□□ 0.45
ITGB1-215ENST00000488494 ECHDC3Q96DC8 303 aa17.89■□□□□ 0.45
ITGB1-215ENST00000488494 IFT43Q96FT9 208 aa17.89■□□□□ 0.45
ITGB1-215ENST00000488494 LCMT1Q9UIC8 334 aa17.89■□□□□ 0.45
ITGB1-215ENST00000488494 TTC24A2A3L6 582 aaPredicted RBP17.88■□□□□ 0.45
ITGB1-215ENST00000488494 TMEM8BA6NDV4 472 aa17.88■□□□□ 0.45
ITGB1-215ENST00000488494 AKR1B15C9JRZ8 316 aaPredicted RBP17.88■□□□□ 0.45
ITGB1-215ENST00000488494 TRIM38O00635 465 aa17.88■□□□□ 0.45
ITGB1-215ENST00000488494 RIOK3O14730 519 aaKnown RBP17.88■□□□□ 0.45
ITGB1-215ENST00000488494 SIGLEC6O43699 453 aa17.88■□□□□ 0.45
ITGB1-215ENST00000488494 NME1P15531 152 aaKnown RBP17.88■□□□□ 0.45
ITGB1-215ENST00000488494 MAN1A1P33908 653 aa17.88■□□□□ 0.45
ITGB1-215ENST00000488494 NSUN2Q08J23 767 aaKnown RBP eCLIP17.88■□□□□ 0.45
ITGB1-215ENST00000488494 MESDQ14696 234 aa17.88■□□□□ 0.45
ITGB1-215ENST00000488494 SARM1Q6SZW1 724 aa17.88■□□□□ 0.45
ITGB1-215ENST00000488494 CCNI2Q6ZMN8 369 aaPredicted RBP17.88■□□□□ 0.45
ITGB1-215ENST00000488494 PGBD5Q8N414 524 aa17.88■□□□□ 0.45
ITGB1-215ENST00000488494 ZNF548Q8NEK5 533 aaPredicted RBP17.88■□□□□ 0.45
ITGB1-215ENST00000488494 NSMCE3Q96MG7 304 aa17.88■□□□□ 0.45
ITGB1-215ENST00000488494 MGME1Q9BQP7 344 aa17.88■□□□□ 0.45
ITGB1-215ENST00000488494 ZNF670Q9BS34 389 aa17.88■□□□□ 0.45
ITGB1-215ENST00000488494 MBNL1Q9NR56 388 aaKnown RBP17.88■□□□□ 0.45
ITGB1-215ENST00000488494 PCDHGA1Q9Y5H4 931 aa17.88■□□□□ 0.45
ITGB1-215ENST00000488494 ANKRD36A6QL64 1941 aa17.88■□□□□ 0.45
ITGB1-215ENST00000488494 H3BM21 787 aa17.87■□□□□ 0.45
ITGB1-215ENST00000488494 KRT7P08729 469 aa17.87■□□□□ 0.45
ITGB1-215ENST00000488494 HSPA9P38646 679 aaKnown RBP17.87■□□□□ 0.45
ITGB1-215ENST00000488494 MMP13P45452 471 aa17.87■□□□□ 0.45
ITGB1-215ENST00000488494 LIG3P49916 1009 aa17.87■□□□□ 0.45
ITGB1-215ENST00000488494 THOP1P52888 689 aa17.87■□□□□ 0.45
ITGB1-215ENST00000488494 HNRNPKP61978 463 aaKnown RBP eCLIP17.87■□□□□ 0.45
ITGB1-215ENST00000488494 TBX2Q13207 712 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms