RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 DKK3Q9UBP4 350 aa11.34□□□□□ -0.59
PCYT1A-215ENST00000488235 BSNQ9UPA5 3926 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 RP1P56715 2156 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 A0A1B0GTH6 734 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 TSPAN11A1L157 253 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 TTC24A2A3L6 582 aaPredicted RBP11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 EEF2KO00418 725 aaKnown RBP11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 FGF10O15520 208 aaPredicted RBP11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 LRCH4O75427 683 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 MBD3O95983 291 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 FTLP02792 175 aaPredicted RBP11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 ALPPL2P10696 532 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 C6P13671 934 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 GM2AP17900 193 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 IL1R2P27930 398 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 EIF4A3P38919 411 aaKnown RBP11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 NDST2P52849 883 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 AIF1P55008 147 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 E2F1Q01094 437 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 RALGDSQ12967 914 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 ASIC2Q16515 512 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 UGP2Q16851 508 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 TMEM52BQ4KMG9 183 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 PERM1Q5SV97 790 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 TXNRD3NBQ6F5E7 133 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 ZCCHC8Q6NZY4 707 aaKnown RBP11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 EFL1Q7Z2Z2 1120 aaKnown RBP11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 SLC35F3Q8IY50 421 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 PHACTR4Q8IZ21 702 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 PELI3Q8N2H9 469 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 SNIP1Q8TAD8 396 aaKnown RBP11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 CXorf40AQ8TE69 158 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 CASKIN2Q8WXE0 1202 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 TSACCQ96A04 125 aaPredicted RBP11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 VCPIP1Q96JH7 1222 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 BPIFA3Q9BQP9 254 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 FUCA2Q9BTY2 467 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 SUV39H2Q9H5I1 410 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 PARVAQ9NVD7 372 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 ETNK2Q9NVF9 386 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 AIPL1Q9NZN9 384 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 APOBEC3BQ9UH17 382 aaKnown RBP11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 IPO11Q9UI26 975 aaKnown RBP11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 MYO6Q9UM54 1294 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 OR1A2Q9Y585 309 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 CSNK1G3Q9Y6M4 447 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 LRRK1Q38SD2 2015 aa11.33□□□□□ -0.6
PCYT1A-215ENST00000488235 CPED1A4D0V7 1026 aa11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 ANKRD62A6NC57 917 aa11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 NEMP2A6NFY4 417 aa11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 GOLGA6L22H0YM25 854 aa11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 RIOK3O14730 519 aaKnown RBP11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 YY2O15391 372 aa11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 CSO75390 466 aaKnown RBP11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 TSHRP16473 764 aa11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 ERCC2P18074 760 aa11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 PRKCIP41743 596 aa11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 ABCG1P45844 678 aa11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 LIG3P49916 1009 aa11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 ADKP55263 362 aaKnown RBP11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 DPYSQ14117 519 aa11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 IQCB1Q15051 598 aa11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 ALG11Q2TAA5 492 aa11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 SMTNL2Q2TAL5 461 aa11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 HS1BP3Q53T59 392 aa11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 PPP6R3Q5H9R7 873 aaPredicted RBP11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 ERMARDQ5T6L9 678 aa11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 CAVIN1Q6NZI2 390 aaKnown RBP11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 MACC1Q6ZN28 852 aa11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 RFX8Q6ZV50 586 aa11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 ZSCAN30Q86W11 494 aa11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 PLA2G15Q8NCC3 412 aa11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 ARHGEF26Q96DR7 871 aa11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 DUSP23Q9BVJ7 150 aa11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 BOCQ9BWV1 1114 aa11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 PRORYQ9H606 182 aa11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 CWC15Q9P013 229 aaKnown RBP11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 CNOT8Q9UFF9 292 aaKnown RBP11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 TENM4Q6N022 2769 aa11.32□□□□□ -0.6
PCYT1A-215ENST00000488235 EME2A4GXA9 379 aaPredicted RBP11.31□□□□□ -0.6
PCYT1A-215ENST00000488235 LMO7DNF2Z398 122 aa11.31□□□□□ -0.6
PCYT1A-215ENST00000488235 H3BM21 787 aa11.31□□□□□ -0.6
PCYT1A-215ENST00000488235 DFFAO00273 331 aa11.31□□□□□ -0.6
PCYT1A-215ENST00000488235 USP12O75317 370 aa11.31□□□□□ -0.6
PCYT1A-215ENST00000488235 PALMO75781 387 aa11.31□□□□□ -0.6
PCYT1A-215ENST00000488235 GP1BAP07359 652 aa11.31□□□□□ -0.6
PCYT1A-215ENST00000488235 CCDC172P0C7W6 258 aa11.31□□□□□ -0.6
PCYT1A-215ENST00000488235 MMP12P39900 470 aa11.31□□□□□ -0.6
PCYT1A-215ENST00000488235 ZNF165P49910 485 aa11.31□□□□□ -0.6
PCYT1A-215ENST00000488235 THOP1P52888 689 aa11.31□□□□□ -0.6
PCYT1A-215ENST00000488235 PDX1P52945 283 aa11.31□□□□□ -0.6
PCYT1A-215ENST00000488235 YPEL5P62699 121 aa11.31□□□□□ -0.6
PCYT1A-215ENST00000488235 GABREP78334 506 aa11.31□□□□□ -0.6
PCYT1A-215ENST00000488235 RAD51Q06609 339 aa11.31□□□□□ -0.6
PCYT1A-215ENST00000488235 CCDC173Q0VFZ6 552 aa11.31□□□□□ -0.6
PCYT1A-215ENST00000488235 INPP5AQ14642 412 aa11.31□□□□□ -0.6
PCYT1A-215ENST00000488235 NR1I3Q14994 352 aa11.31□□□□□ -0.6
PCYT1A-215ENST00000488235 LRRC14Q15048 493 aa11.31□□□□□ -0.6
PCYT1A-215ENST00000488235 PTPRRQ15256 657 aa11.31□□□□□ -0.6
PCYT1A-215ENST00000488235 TBC1D25Q3MII6 688 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms