RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 SKOR1P84550 965 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 OASLQ15646 514 aaKnown RBP11.14□□□□□ -0.63
UBE4B-210ENST00000488228 CCDC6Q16204 474 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 PCSK7Q16549 785 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 KCTD19Q17RG1 926 aaPredicted RBP11.14□□□□□ -0.63
UBE4B-210ENST00000488228 TEX44Q53QW1 395 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 RALGPS1Q5JS13 557 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 LYSMD4Q5XG99 296 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 SEL1L3Q68CR1 1132 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 KIAA0895LQ68EN5 471 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 LAIR1Q6GTX8 287 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 CYP2U1Q7Z449 544 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 PRPF39Q86UA1 669 aaKnown RBP11.14□□□□□ -0.63
UBE4B-210ENST00000488228 RASGEF1CQ8N431 466 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 TAB3Q8N5C8 712 aaPredicted RBP11.14□□□□□ -0.63
UBE4B-210ENST00000488228 OR2T34Q8NGX1 318 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 SPATA22Q8NHS9 363 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 CCDC110Q8TBZ0 833 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 NKD2Q969F2 451 aaPredicted RBP11.14□□□□□ -0.63
UBE4B-210ENST00000488228 ECHDC3Q96DC8 303 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 IMP4Q96G21 291 aaKnown RBP11.14□□□□□ -0.63
UBE4B-210ENST00000488228 ZC3H10Q96K80 434 aaKnown RBP11.14□□□□□ -0.63
UBE4B-210ENST00000488228 PBKQ96KB5 322 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 CAPZA3Q96KX2 299 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 C16orf45Q96MC5 204 aaPredicted RBP11.14□□□□□ -0.63
UBE4B-210ENST00000488228 ZNF641Q96N77 438 aaPredicted RBP11.14□□□□□ -0.63
UBE4B-210ENST00000488228 SPATA13Q96N96 652 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 GORASP1Q9BQQ3 440 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 TMEM121Q9BTD3 319 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 TDRD1Q9BXT4 1180 aaKnown RBP11.14□□□□□ -0.63
UBE4B-210ENST00000488228 USP29Q9HBJ7 922 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 PCDH12Q9NPG4 1184 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 HAUS2Q9NVX0 235 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 UBP1Q9NZI7 540 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 DKK3Q9UBP4 350 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 RSPH14Q9UHP6 348 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.14□□□□□ -0.63
UBE4B-210ENST00000488228 PCDHB9Q9Y5E1 797 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 FADS3Q9Y5Q0 445 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 SLCO1B1Q9Y6L6 691 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 PIEZO1Q92508 2521 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 LRP4O75096 1905 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 TBC1D3DA0A087WVF3 549 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 TBC1D3IA0A087WXS9 549 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 TBC1D3EA0A087X179 549 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 TBC1D3KA0A087X1G2 549 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 A0A1W2PQU0 124 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 CTAGE9A4FU28 777 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 TBC1D3FA6NER0 549 aaPredicted RBP11.13□□□□□ -0.63
UBE4B-210ENST00000488228 TBC1D3LB9A6J9 549 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 AREL1O15033 823 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 HTRA2O43464 458 aaPredicted RBP11.13□□□□□ -0.63
UBE4B-210ENST00000488228 RNGTTO60942 597 aaKnown RBP11.13□□□□□ -0.63
UBE4B-210ENST00000488228 STK10O94804 968 aaKnown RBP11.13□□□□□ -0.63
UBE4B-210ENST00000488228 RHOBTB1O94844 696 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 PCDH8O95206 1070 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 EPN2O95208 641 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 PGLSO95336 258 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 MT-CYBP00156 380 aaPredicted RBP11.13□□□□□ -0.63
UBE4B-210ENST00000488228 LMNAP02545 664 aaKnown RBP11.13□□□□□ -0.63
UBE4B-210ENST00000488228 PDHA1P08559 390 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 SERPINF2P08697 491 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 TBC1D3HP0C7X1 549 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 PRLRP16471 622 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 CTPS1P17812 591 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 XPAP23025 273 aaPredicted RBP11.13□□□□□ -0.63
UBE4B-210ENST00000488228 MAOBP27338 520 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 PSMB4P28070 264 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 MMP12P39900 470 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 CREB5Q02930 508 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 GALNT3Q14435 633 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 PTPRRQ15256 657 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 HS1BP3Q53T59 392 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 ANKRD20A2Q5SQ80 823 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 ARMC12Q5T9G4 340 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 ANKRD20A1Q5TYW2 823 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 ANKRD20A3Q5VUR7 823 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 TBC1D3GQ6DHY5 549 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 TBC1D3CQ6IPX1 549 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 BRAT1Q6PJG6 821 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 SYT10Q6XYQ8 523 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 NYAP1Q6ZVC0 841 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 PRUNE1Q86TP1 453 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 TBC1D3Q8IZP1 549 aaPredicted RBP11.13□□□□□ -0.63
UBE4B-210ENST00000488228 ZCCHC9Q8N567 271 aaKnown RBP11.13□□□□□ -0.63
UBE4B-210ENST00000488228 PRELID2Q8N945 189 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 LPCAT1Q8NF37 534 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 KLK6Q92876 244 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 BIRC7Q96CA5 298 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 OXNAD1Q96HP4 312 aaPredicted RBP11.13□□□□□ -0.63
UBE4B-210ENST00000488228 VAT1Q99536 393 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 MYOCQ99972 504 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 WRAP53Q9BUR4 548 aaKnown RBP11.13□□□□□ -0.63
UBE4B-210ENST00000488228 AP1M1Q9BXS5 423 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 SLC25A51Q9H1U9 297 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 GBA3Q9H227 469 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 SMOC1Q9H4F8 434 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 PREBQ9HCU5 417 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 CHKBQ9Y259 395 aa11.13□□□□□ -0.63
UBE4B-210ENST00000488228 KNL1Q8NG31 2342 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms