RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 DNPEPQ9ULA0 475 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 SMG5Q9UPR3 1016 aaKnown RBP15.88■□□□□ 0.13
C9orf3-219ENST00000488186 RAI2Q9Y5P3 530 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 SAR1BQ9Y6B6 198 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 RALGAPA1Q6GYQ0 2036 aa15.88■□□□□ 0.13
C9orf3-219ENST00000488186 FRYLO94915 3013 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 GON4LQ3T8J9 2241 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 GOLGA6L10A0A0M3HER8 536 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 CES2O00748 559 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 PLRG1O43660 514 aaKnown RBP15.87■□□□□ 0.13
C9orf3-219ENST00000488186 LIASO43766 372 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 TIMP2P16035 220 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 STIP1P31948 543 aaKnown RBP15.87■□□□□ 0.13
C9orf3-219ENST00000488186 SUOXP51687 545 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 ETF1P62495 437 aaKnown RBP15.87■□□□□ 0.13
C9orf3-219ENST00000488186 NIPAL4Q0D2K0 466 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 ELP6Q0PNE2 266 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 WASHC5Q12768 1159 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 PRPSAP1Q14558 356 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 WDR45BQ5MNZ6 344 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 PIP5KL1Q5T9C9 394 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 LYSMD4Q5XG99 296 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 PMS2CLQ68D20 193 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 CCDC70Q6NSX1 233 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 GSTA5Q7RTV2 222 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 RASGEF1CQ8N431 466 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 GPR161Q8N6U8 529 aaKnown RBP15.87■□□□□ 0.13
C9orf3-219ENST00000488186 FAM71DQ8N9W8 422 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 COG1Q8WTW3 980 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 RUBCNQ92622 972 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 IFT43Q96FT9 208 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 HSPA12BQ96MM6 686 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 RBM15Q96T37 977 aaKnown RBP eCLIP15.87■□□□□ 0.13
C9orf3-219ENST00000488186 TMEM121Q9BTD3 319 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 PCED1AQ9H1Q7 454 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 C6orf106Q9H6K1 298 aaPredicted RBP15.87■□□□□ 0.13
C9orf3-219ENST00000488186 PREBQ9HCU5 417 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 GMEB2Q9UKD1 530 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 PCDHB9Q9Y5E1 797 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 PCDHGA5Q9Y5G8 931 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 CEP192Q8TEP8 1941 aa15.87■□□□□ 0.13
C9orf3-219ENST00000488186 METTL12A8MUP2 240 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 UPK3BL1B0FP48 263 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 UPK3BL2E5RIL1 263 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 RNGTTO60942 597 aaKnown RBP15.86■□□□□ 0.13
C9orf3-219ENST00000488186 CPP00450 1065 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 RETP07949 1114 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 PRLRP16471 622 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 NFKB1P19838 968 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 PAFAH1B1P43034 410 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 FAM193AP78312 1265 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 UGP2Q16851 508 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 ANKRD20A2Q5SQ80 823 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 FAM182AQ5T1J6 154 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 ANKRD20A1Q5TYW2 823 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 ANKRD20A3Q5VUR7 823 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 PAPD7Q5XG87 772 aaKnown RBP15.86■□□□□ 0.13
C9orf3-219ENST00000488186 KIAA0895LQ68EN5 471 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 ALG1LQ6GMV1 187 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 SYT10Q6XYQ8 523 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 ARHGEF18Q6ZSZ5 1173 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 ASCL5Q7RTU5 278 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 CYP2U1Q7Z449 544 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 PRPF39Q86UA1 669 aaKnown RBP15.86■□□□□ 0.13
C9orf3-219ENST00000488186 SLC35B2Q8TB61 432 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 ARRDC2Q8TBH0 407 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 ACTRT1Q8TDG2 376 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 CXorf40AQ8TE69 158 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 LRRC45Q96CN5 670 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 IMP4Q96G21 291 aaKnown RBP15.86■□□□□ 0.13
C9orf3-219ENST00000488186 ZNF419Q96HQ0 510 aaPredicted RBP15.86■□□□□ 0.13
C9orf3-219ENST00000488186 HINFPQ9BQA5 517 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 MIR1-1HGQ9H1L0 117 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 PCDH9Q9HC56 1237 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 NCDNQ9UBB6 729 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 TTC7AQ9ULT0 858 aaPredicted RBP15.86■□□□□ 0.13
C9orf3-219ENST00000488186 TPX2Q9ULW0 747 aaKnown RBP15.86■□□□□ 0.13
C9orf3-219ENST00000488186 PHTF1Q9UMS5 762 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 FADS3Q9Y5Q0 445 aa15.86■□□□□ 0.13
C9orf3-219ENST00000488186 C5orf60A6NFR6 353 aa15.85■□□□□ 0.13
C9orf3-219ENST00000488186 F5H423 210 aaPredicted RBP15.85■□□□□ 0.13
C9orf3-219ENST00000488186 TRAFD1O14545 582 aaPredicted RBP15.85■□□□□ 0.13
C9orf3-219ENST00000488186 HTRA2O43464 458 aaPredicted RBP15.85■□□□□ 0.13
C9orf3-219ENST00000488186 TSPAN6O43657 245 aa15.85■□□□□ 0.13
C9orf3-219ENST00000488186 AP1G1O43747 822 aa15.85■□□□□ 0.13
C9orf3-219ENST00000488186 FOXD2O60548 495 aaPredicted RBP15.85■□□□□ 0.13
C9orf3-219ENST00000488186 GFRA3O60609 400 aa15.85■□□□□ 0.13
C9orf3-219ENST00000488186 OPHN1O60890 802 aa15.85■□□□□ 0.13
C9orf3-219ENST00000488186 IFNB1P01574 187 aa15.85■□□□□ 0.13
C9orf3-219ENST00000488186 DPP6P42658 865 aa15.85■□□□□ 0.13
C9orf3-219ENST00000488186 CREB5Q02930 508 aa15.85■□□□□ 0.13
C9orf3-219ENST00000488186 TRAF2Q12933 501 aa15.85■□□□□ 0.13
C9orf3-219ENST00000488186 SGCGQ13326 291 aa15.85■□□□□ 0.13
C9orf3-219ENST00000488186 PCSK7Q16549 785 aa15.85■□□□□ 0.13
C9orf3-219ENST00000488186 LRRC73Q5JTD7 316 aa15.85■□□□□ 0.13
C9orf3-219ENST00000488186 NEK5Q6P3R8 708 aa15.85■□□□□ 0.13
C9orf3-219ENST00000488186 KDELC2Q7Z4H8 507 aa15.85■□□□□ 0.13
C9orf3-219ENST00000488186 CCDC89Q8N998 374 aa15.85■□□□□ 0.13
C9orf3-219ENST00000488186 CCDC110Q8TBZ0 833 aa15.85■□□□□ 0.13
C9orf3-219ENST00000488186 PIGKQ92643 395 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms