RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 CSNK1DP48730 415 aa19.51■□□□□ 0.71
CD55-209ENST00000488171 HCAR3P49019 387 aa19.51■□□□□ 0.71
CD55-209ENST00000488171 FANCCQ00597 558 aa19.51■□□□□ 0.71
CD55-209ENST00000488171 DPYSQ14117 519 aa19.51■□□□□ 0.71
CD55-209ENST00000488171 RTP5Q14D33 572 aa19.51■□□□□ 0.71
CD55-209ENST00000488171 COL28A1Q2UY09 1125 aa19.51■□□□□ 0.71
CD55-209ENST00000488171 CAMK1DQ8IU85 385 aa19.51■□□□□ 0.71
CD55-209ENST00000488171 TP53INP2Q8IXH6 220 aa19.51■□□□□ 0.71
CD55-209ENST00000488171 TSEN2Q8NCE0 465 aaKnown RBP19.51■□□□□ 0.71
CD55-209ENST00000488171 ZNF641Q96N77 438 aaPredicted RBP19.51■□□□□ 0.71
CD55-209ENST00000488171 TUBGCP5Q96RT8 1024 aa19.51■□□□□ 0.71
CD55-209ENST00000488171 C1QTNF7Q9BXJ2 289 aa19.51■□□□□ 0.71
CD55-209ENST00000488171 NRSN2Q9GZP1 204 aa19.51■□□□□ 0.71
CD55-209ENST00000488171 TCEAL2Q9H3H9 227 aaPredicted RBP19.51■□□□□ 0.71
CD55-209ENST00000488171 MRPL47Q9HD33 250 aaKnown RBP19.51■□□□□ 0.71
CD55-209ENST00000488171 PCDH12Q9NPG4 1184 aa19.51■□□□□ 0.71
CD55-209ENST00000488171 COQ6Q9Y2Z9 468 aa19.51■□□□□ 0.71
CD55-209ENST00000488171 FAM208BQ5VWN6 2430 aa19.51■□□□□ 0.71
CD55-209ENST00000488171 APC2O95996 2303 aa19.5■□□□□ 0.71
CD55-209ENST00000488171 A0A1W2PQJ5 194 aa19.5■□□□□ 0.71
CD55-209ENST00000488171 DFFAO00273 331 aa19.5■□□□□ 0.71
CD55-209ENST00000488171 AQP9O43315 295 aa19.5■□□□□ 0.71
CD55-209ENST00000488171 PALMO75781 387 aa19.5■□□□□ 0.71
CD55-209ENST00000488171 TCF4P15884 667 aa19.5■□□□□ 0.71
CD55-209ENST00000488171 XPAP23025 273 aaPredicted RBP19.5■□□□□ 0.71
CD55-209ENST00000488171 PCK1P35558 622 aa19.5■□□□□ 0.71
CD55-209ENST00000488171 ZNF135P52742 658 aaPredicted RBP19.5■□□□□ 0.71
CD55-209ENST00000488171 YPEL5P62699 121 aa19.5■□□□□ 0.71
CD55-209ENST00000488171 ELP6Q0PNE2 266 aa19.5■□□□□ 0.71
CD55-209ENST00000488171 PTK2BQ14289 1009 aa19.5■□□□□ 0.71
CD55-209ENST00000488171 IRF4Q15306 451 aa19.5■□□□□ 0.71
CD55-209ENST00000488171 SRLQ86TD4 932 aa19.5■□□□□ 0.71
CD55-209ENST00000488171 RBFAQ8N0V3 343 aa19.5■□□□□ 0.71
CD55-209ENST00000488171 HNRNPLLQ8WVV9 542 aaKnown RBP19.5■□□□□ 0.71
CD55-209ENST00000488171 USP29Q9HBJ7 922 aa19.5■□□□□ 0.71
CD55-209ENST00000488171 SCUBE2Q9NQ36 999 aa19.5■□□□□ 0.71
CD55-209ENST00000488171 A0A087WV48 116 aa19.49■□□□□ 0.71
CD55-209ENST00000488171 RIOK3O14730 519 aaKnown RBP19.49■□□□□ 0.71
CD55-209ENST00000488171 OPA1O60313 960 aa19.49■□□□□ 0.71
CD55-209ENST00000488171 MT-CO3P00414 261 aa19.49■□□□□ 0.71
CD55-209ENST00000488171 GP1BAP07359 652 aa19.49■□□□□ 0.71
CD55-209ENST00000488171 C6P13671 934 aa19.49■□□□□ 0.71
CD55-209ENST00000488171 EIF4A3P38919 411 aaKnown RBP19.49■□□□□ 0.71
CD55-209ENST00000488171 THOP1P52888 689 aa19.49■□□□□ 0.71
CD55-209ENST00000488171 IL10RBQ08334 325 aa19.49■□□□□ 0.71
CD55-209ENST00000488171 ACAP1Q15027 740 aa19.49■□□□□ 0.71
CD55-209ENST00000488171 TDRD12Q587J7 1177 aaKnown RBP19.49■□□□□ 0.71
CD55-209ENST00000488171 CDCP2Q5VXM1 449 aa19.49■□□□□ 0.71
CD55-209ENST00000488171 ZCCHC8Q6NZY4 707 aaKnown RBP19.49■□□□□ 0.71
CD55-209ENST00000488171 BRAT1Q6PJG6 821 aa19.49■□□□□ 0.71
CD55-209ENST00000488171 LMX1AQ8TE12 382 aa19.49■□□□□ 0.71
CD55-209ENST00000488171 BTN2A2Q8WVV5 523 aa19.49■□□□□ 0.71
CD55-209ENST00000488171 SYN2Q92777 582 aaPredicted RBP19.49■□□□□ 0.71
CD55-209ENST00000488171 SP110Q9HB58 689 aa19.49■□□□□ 0.71
CD55-209ENST00000488171 NBEAQ8NFP9 2946 aa19.49■□□□□ 0.71
CD55-209ENST00000488171 ITPR1Q14643 2758 aa19.48■□□□□ 0.71
CD55-209ENST00000488171 TOR1BO14657 336 aa19.48■□□□□ 0.71
CD55-209ENST00000488171 MUSKO15146 869 aa19.48■□□□□ 0.71
CD55-209ENST00000488171 GCATO75600 419 aa19.48■□□□□ 0.71
CD55-209ENST00000488171 PRKCGP05129 697 aa19.48■□□□□ 0.71
CD55-209ENST00000488171 MMP12P39900 470 aa19.48■□□□□ 0.71
CD55-209ENST00000488171 DUSP3P51452 185 aaPredicted RBP19.48■□□□□ 0.71
CD55-209ENST00000488171 SEMG2Q02383 582 aa19.48■□□□□ 0.71
CD55-209ENST00000488171 RFTN1Q14699 578 aaPredicted RBP19.48■□□□□ 0.71
CD55-209ENST00000488171 DPYSL2Q16555 572 aa19.48■□□□□ 0.71
CD55-209ENST00000488171 SMTNL2Q2TAL5 461 aa19.48■□□□□ 0.71
CD55-209ENST00000488171 WSCD2Q2TBF2 565 aa19.48■□□□□ 0.71
CD55-209ENST00000488171 DEFB133Q30KQ1 61 aa19.48■□□□□ 0.71
CD55-209ENST00000488171 MACC1Q6ZN28 852 aa19.48■□□□□ 0.71
CD55-209ENST00000488171 PHACTR4Q8IZ21 702 aa19.48■□□□□ 0.71
CD55-209ENST00000488171 ECHDC3Q96DC8 303 aa19.48■□□□□ 0.71
CD55-209ENST00000488171 NSMCE3Q96MG7 304 aa19.48■□□□□ 0.71
CD55-209ENST00000488171 LRRC61Q9BV99 259 aa19.48■□□□□ 0.71
CD55-209ENST00000488171 CINPQ9BW66 212 aaPredicted RBP19.48■□□□□ 0.71
CD55-209ENST00000488171 ATP13A3Q9H7F0 1226 aa19.48■□□□□ 0.71
CD55-209ENST00000488171 ZWILCHQ9H900 591 aa19.48■□□□□ 0.71
CD55-209ENST00000488171 APOBEC3BQ9UH17 382 aaKnown RBP19.48■□□□□ 0.71
CD55-209ENST00000488171 ATP8A1Q9Y2Q0 1164 aa19.48■□□□□ 0.71
CD55-209ENST00000488171 BZW2Q9Y6E2 419 aaKnown RBP19.48■□□□□ 0.71
CD55-209ENST00000488171 AK5Q9Y6K8 562 aa19.48■□□□□ 0.71
CD55-209ENST00000488171 ANKRD36A6QL64 1941 aa19.48■□□□□ 0.71
CD55-209ENST00000488171 ACACAQ13085 2346 aa19.48■□□□□ 0.71
CD55-209ENST00000488171 KNTC1P50748 2209 aa19.47■□□□□ 0.71
CD55-209ENST00000488171 TPP1O14773 563 aa19.47■□□□□ 0.71
CD55-209ENST00000488171 SERPINA4P29622 427 aa19.47■□□□□ 0.71
CD55-209ENST00000488171 LIG3P49916 1009 aa19.47■□□□□ 0.71
CD55-209ENST00000488171 UBASH3AP57075 661 aa19.47■□□□□ 0.71
CD55-209ENST00000488171 TPM4P67936 248 aa19.47■□□□□ 0.71
CD55-209ENST00000488171 NSUN2Q08J23 767 aaKnown RBP eCLIP19.47■□□□□ 0.71
CD55-209ENST00000488171 LRRC14Q15048 493 aa19.47■□□□□ 0.71
CD55-209ENST00000488171 AGERQ15109 404 aa19.47■□□□□ 0.71
CD55-209ENST00000488171 PRRT3Q5FWE3 981 aa19.47■□□□□ 0.71
CD55-209ENST00000488171 CFAP58Q5T655 872 aa19.47■□□□□ 0.71
CD55-209ENST00000488171 TXNRD3NBQ6F5E7 133 aa19.47■□□□□ 0.71
CD55-209ENST00000488171 ERAP2Q6P179 960 aa19.47■□□□□ 0.71
CD55-209ENST00000488171 LZTR1Q8N653 840 aa19.47■□□□□ 0.71
CD55-209ENST00000488171 IFI44Q8TCB0 444 aa19.47■□□□□ 0.71
CD55-209ENST00000488171 HSPH1Q92598 858 aa19.47■□□□□ 0.71
CD55-209ENST00000488171 TBATAQ96M53 351 aa19.47■□□□□ 0.71
CD55-209ENST00000488171 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms