RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 CCNI2Q6ZMN8 369 aaPredicted RBP11.56□□□□□ -0.56
SPEN-205ENST00000487496 KDM7AQ6ZMT4 941 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 TMPRSS7Q7RTY8 843 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 KDF1Q8NAX2 398 aaPredicted RBP11.56□□□□□ -0.56
SPEN-205ENST00000487496 DENND6BQ8NEG7 585 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 CXorf40AQ8TE69 158 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 IFT43Q96FT9 208 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 NSMCE3Q96MG7 304 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 ZNF599Q96NL3 588 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 PSKH2Q96QS6 385 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 WRAP53Q9BUR4 548 aaKnown RBP11.56□□□□□ -0.56
SPEN-205ENST00000487496 DEF6Q9H4E7 631 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 ATP13A3Q9H7F0 1226 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 UCKL1Q9NWZ5 548 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 SEPT3Q9UH03 358 aa11.56□□□□□ -0.56
SPEN-205ENST00000487496 SPTY2D1-AS1A0A0U1RR47 76 aa11.55□□□□□ -0.56
SPEN-205ENST00000487496 TRIM38O00635 465 aa11.55□□□□□ -0.56
SPEN-205ENST00000487496 RIOK3O14730 519 aaKnown RBP11.55□□□□□ -0.56
SPEN-205ENST00000487496 PIAS2O75928 621 aa11.55□□□□□ -0.56
SPEN-205ENST00000487496 CSF2P04141 144 aa11.55□□□□□ -0.56
SPEN-205ENST00000487496 PRKCGP05129 697 aa11.55□□□□□ -0.56
SPEN-205ENST00000487496 GIMD1P0DJR0 217 aa11.55□□□□□ -0.56
SPEN-205ENST00000487496 SERPINA4P29622 427 aa11.55□□□□□ -0.56
SPEN-205ENST00000487496 SERPINB6P35237 376 aa11.55□□□□□ -0.56
SPEN-205ENST00000487496 SCNN1BP51168 640 aa11.55□□□□□ -0.56
SPEN-205ENST00000487496 RENBPP51606 427 aa11.55□□□□□ -0.56
SPEN-205ENST00000487496 ARSEP51690 589 aa11.55□□□□□ -0.56
SPEN-205ENST00000487496 TAS2R40P59535 323 aa11.55□□□□□ -0.56
SPEN-205ENST00000487496 MMRN1Q13201 1228 aa11.55□□□□□ -0.56
SPEN-205ENST00000487496 ZNF211Q13398 564 aaPredicted RBP11.55□□□□□ -0.56
SPEN-205ENST00000487496 PDE1CQ14123 709 aaPredicted RBP11.55□□□□□ -0.56
SPEN-205ENST00000487496 ZNF542PQ5EBM4 170 aa11.55□□□□□ -0.56
SPEN-205ENST00000487496 TPRG1LQ5T0D9 272 aa11.55□□□□□ -0.56
SPEN-205ENST00000487496 CFAP58Q5T655 872 aa11.55□□□□□ -0.56
SPEN-205ENST00000487496 TMCO4Q5TGY1 634 aa11.55□□□□□ -0.56
SPEN-205ENST00000487496 DHRS13Q6UX07 377 aa11.55□□□□□ -0.56
SPEN-205ENST00000487496 ZSWIM9Q86XI8 627 aa11.55□□□□□ -0.56
SPEN-205ENST00000487496 ECHDC3Q96DC8 303 aa11.55□□□□□ -0.56
SPEN-205ENST00000487496 C1QTNF7Q9BXJ2 289 aa11.55□□□□□ -0.56
SPEN-205ENST00000487496 NHEJ1Q9H9Q4 299 aaPredicted RBP11.55□□□□□ -0.56
SPEN-205ENST00000487496 PCDH12Q9NPG4 1184 aa11.55□□□□□ -0.56
SPEN-205ENST00000487496 MBNL1Q9NR56 388 aaKnown RBP11.55□□□□□ -0.56
SPEN-205ENST00000487496 DNAJC28Q9NX36 388 aa11.55□□□□□ -0.56
SPEN-205ENST00000487496 RCOR3Q9P2K3 495 aaPredicted RBP11.55□□□□□ -0.56
SPEN-205ENST00000487496 ATP8A1Q9Y2Q0 1164 aa11.55□□□□□ -0.56
SPEN-205ENST00000487496 PCDHGA1Q9Y5H4 931 aa11.55□□□□□ -0.56
SPEN-205ENST00000487496 COL5A1P20908 1838 aaPredicted RBP11.54□□□□□ -0.56
SPEN-205ENST00000487496 ARID1BQ8NFD5 2236 aaPredicted RBP11.54□□□□□ -0.56
SPEN-205ENST00000487496 TTC24A2A3L6 582 aaPredicted RBP11.54□□□□□ -0.56
SPEN-205ENST00000487496 TMEM8BA6NDV4 472 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 TRAFD1O14545 582 aaPredicted RBP11.54□□□□□ -0.56
SPEN-205ENST00000487496 SIGLEC6O43699 453 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 C1SP09871 688 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 TMEM253P0C7T8 217 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 C6P13671 934 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 NME1P15531 152 aaKnown RBP11.54□□□□□ -0.56
SPEN-205ENST00000487496 CKMT2P17540 419 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 CR2P20023 1033 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 IGFALSP35858 605 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 GJC1P36383 396 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 HSPA9P38646 679 aaKnown RBP11.54□□□□□ -0.56
SPEN-205ENST00000487496 MMP12P39900 470 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 ACADVLP49748 655 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 LIG3P49916 1009 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 AP1S1P61966 158 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 HNRNPKP61978 463 aaKnown RBP eCLIP11.54□□□□□ -0.56
SPEN-205ENST00000487496 SEMG2Q02383 582 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 BCL2L1Q07817 233 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 TBX2Q13207 712 aaPredicted RBP11.54□□□□□ -0.56
SPEN-205ENST00000487496 DPYSL3Q14195 570 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 ZNF235Q14590 738 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 SMAD1Q15797 465 aaKnown RBP11.54□□□□□ -0.56
SPEN-205ENST00000487496 PROX2Q3B8N5 592 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 ERAP2Q6P179 960 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 PARGQ86W56 976 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 MARCH9Q86YJ5 346 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 GALNT15Q8N3T1 639 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 ATPAF2Q8N5M1 289 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 TP53I13Q8NBR0 393 aaPredicted RBP11.54□□□□□ -0.56
SPEN-205ENST00000487496 PCDH19Q8TAB3 1148 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 CCDC42Q96M95 316 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 SPTLC3Q9NUV7 552 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 LCMT1Q9UIC8 334 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 KLF15Q9UIH9 416 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 ZMIZ1Q9ULJ6 1067 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 COQ6Q9Y2Z9 468 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 CACNA1BQ00975 2339 aa11.54□□□□□ -0.56
SPEN-205ENST00000487496 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.53□□□□□ -0.56
SPEN-205ENST00000487496 NEMP2A6NFY4 417 aa11.53□□□□□ -0.56
SPEN-205ENST00000487496 TMEM110-MUSTN1A8MSY1 372 aa11.53□□□□□ -0.56
SPEN-205ENST00000487496 AKR1B15C9JRZ8 316 aaPredicted RBP11.53□□□□□ -0.56
SPEN-205ENST00000487496 FFAR2O15552 330 aa11.53□□□□□ -0.56
SPEN-205ENST00000487496 RFPL3O75679 317 aa11.53□□□□□ -0.56
SPEN-205ENST00000487496 KRT7P08729 469 aa11.53□□□□□ -0.56
SPEN-205ENST00000487496 CDK4P11802 303 aa11.53□□□□□ -0.56
SPEN-205ENST00000487496 MAN1A1P33908 653 aa11.53□□□□□ -0.56
SPEN-205ENST00000487496 THOP1P52888 689 aa11.53□□□□□ -0.56
SPEN-205ENST00000487496 YPEL5P62699 121 aa11.53□□□□□ -0.56
SPEN-205ENST00000487496 POLR2LP62875 67 aaKnown RBP11.53□□□□□ -0.56
SPEN-205ENST00000487496 RALGDSQ12967 914 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms