RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 MAST4O15021 2626 aa19.67■□□□□ 0.74
SMPDL3A-202ENST00000487215 KDELR3O43731 214 aa19.66■□□□□ 0.74
SMPDL3A-202ENST00000487215 LRIG2O94898 1065 aa19.66■□□□□ 0.74
SMPDL3A-202ENST00000487215 GJB6O95452 261 aa19.66■□□□□ 0.74
SMPDL3A-202ENST00000487215 MMEP08473 750 aa19.66■□□□□ 0.74
SMPDL3A-202ENST00000487215 ALPIP09923 528 aa19.66■□□□□ 0.74
SMPDL3A-202ENST00000487215 CTSEP14091 401 aa19.66■□□□□ 0.74
SMPDL3A-202ENST00000487215 TIMP2P16035 220 aa19.66■□□□□ 0.74
SMPDL3A-202ENST00000487215 PEX5P50542 639 aa19.66■□□□□ 0.74
SMPDL3A-202ENST00000487215 NYAP1Q6ZVC0 841 aa19.66■□□□□ 0.74
SMPDL3A-202ENST00000487215 NETO2Q8NC67 525 aa19.66■□□□□ 0.74
SMPDL3A-202ENST00000487215 TBC1D31Q96DN5 1066 aa19.66■□□□□ 0.74
SMPDL3A-202ENST00000487215 TTYH3Q9C0H2 523 aa19.66■□□□□ 0.74
SMPDL3A-202ENST00000487215 STRADBQ9C0K7 418 aa19.66■□□□□ 0.74
SMPDL3A-202ENST00000487215 NDST4Q9H3R1 872 aa19.66■□□□□ 0.74
SMPDL3A-202ENST00000487215 KIAA1468Q9P260 1216 aa19.66■□□□□ 0.74
SMPDL3A-202ENST00000487215 DKK3Q9UBP4 350 aa19.66■□□□□ 0.74
SMPDL3A-202ENST00000487215 GPR34Q9UPC5 381 aa19.66■□□□□ 0.74
SMPDL3A-202ENST00000487215 COQ6Q9Y2Z9 468 aa19.66■□□□□ 0.74
SMPDL3A-202ENST00000487215 CHD5Q8TDI0 1954 aa19.66■□□□□ 0.74
SMPDL3A-202ENST00000487215 PIEZO2Q9H5I5 2752 aa19.66■□□□□ 0.74
SMPDL3A-202ENST00000487215 TMX2-CTNND1H3BSU7 103 aa19.65■□□□□ 0.74
SMPDL3A-202ENST00000487215 BUB1O43683 1085 aa19.65■□□□□ 0.74
SMPDL3A-202ENST00000487215 RASGRP1O95267 797 aa19.65■□□□□ 0.74
SMPDL3A-202ENST00000487215 IGSF6O95976 241 aa19.65■□□□□ 0.74
SMPDL3A-202ENST00000487215 CCKBRP32239 447 aa19.65■□□□□ 0.74
SMPDL3A-202ENST00000487215 RAD51Q06609 339 aa19.65■□□□□ 0.74
SMPDL3A-202ENST00000487215 WSCD2Q2TBF2 565 aa19.65■□□□□ 0.74
SMPDL3A-202ENST00000487215 CCDC14Q49A88 953 aa19.65■□□□□ 0.74
SMPDL3A-202ENST00000487215 TMEM52BQ4KMG9 183 aa19.65■□□□□ 0.74
SMPDL3A-202ENST00000487215 VWA3BQ502W6 1294 aa19.65■□□□□ 0.74
SMPDL3A-202ENST00000487215 ENPP7Q6UWV6 458 aa19.65■□□□□ 0.74
SMPDL3A-202ENST00000487215 USP53Q70EK8 1073 aa19.65■□□□□ 0.74
SMPDL3A-202ENST00000487215 RXFP2Q8WXD0 754 aa19.65■□□□□ 0.74
SMPDL3A-202ENST00000487215 SGF29Q96ES7 293 aa19.65■□□□□ 0.74
SMPDL3A-202ENST00000487215 FAM117AQ9C073 453 aa19.65■□□□□ 0.74
SMPDL3A-202ENST00000487215 LRRN3Q9H3W5 708 aa19.65■□□□□ 0.74
SMPDL3A-202ENST00000487215 PISDQ9UG56 409 aa19.65■□□□□ 0.74
SMPDL3A-202ENST00000487215 MFHAS1Q9Y4C4 1052 aa19.65■□□□□ 0.74
SMPDL3A-202ENST00000487215 HEMK1Q9Y5R4 338 aaPredicted RBP19.65■□□□□ 0.74
SMPDL3A-202ENST00000487215 ZSCAN5CA6NGD5 496 aaPredicted RBP19.64■□□□□ 0.73
SMPDL3A-202ENST00000487215 TMEM110-MUSTN1A8MSY1 372 aa19.64■□□□□ 0.73
SMPDL3A-202ENST00000487215 PLEKP08567 350 aaPredicted RBP19.64■□□□□ 0.73
SMPDL3A-202ENST00000487215 SDC4P31431 198 aa19.64■□□□□ 0.73
SMPDL3A-202ENST00000487215 CSRP3P50461 194 aa19.64■□□□□ 0.73
SMPDL3A-202ENST00000487215 NFATC4Q14934 902 aa19.64■□□□□ 0.73
SMPDL3A-202ENST00000487215 LRRC14Q15048 493 aa19.64■□□□□ 0.73
SMPDL3A-202ENST00000487215 MIIPQ5JXC2 388 aa19.64■□□□□ 0.73
SMPDL3A-202ENST00000487215 KLHDC7AQ5VTJ3 777 aa19.64■□□□□ 0.73
SMPDL3A-202ENST00000487215 RD3Q7Z3Z2 195 aa19.64■□□□□ 0.73
SMPDL3A-202ENST00000487215 PHLDB2Q86SQ0 1253 aa19.64■□□□□ 0.73
SMPDL3A-202ENST00000487215 GKN2Q86XP6 184 aa19.64■□□□□ 0.73
SMPDL3A-202ENST00000487215 ZNF354CQ86Y25 554 aa19.64■□□□□ 0.73
SMPDL3A-202ENST00000487215 CCDC185Q8N715 623 aa19.64■□□□□ 0.73
SMPDL3A-202ENST00000487215 EPS8L1Q8TE68 723 aa19.64■□□□□ 0.73
SMPDL3A-202ENST00000487215 EXTL1Q92935 676 aa19.64■□□□□ 0.73
SMPDL3A-202ENST00000487215 TMEM74Q96NL1 305 aa19.64■□□□□ 0.73
SMPDL3A-202ENST00000487215 NAA15Q9BXJ9 866 aaKnown RBP19.64■□□□□ 0.73
SMPDL3A-202ENST00000487215 TRIM4Q9C037 500 aa19.64■□□□□ 0.73
SMPDL3A-202ENST00000487215 NOL6Q9H6R4 1146 aaKnown RBP19.64■□□□□ 0.73
SMPDL3A-202ENST00000487215 LOXL2Q9Y4K0 774 aa19.64■□□□□ 0.73
SMPDL3A-202ENST00000487215 INSIG1O15503 277 aa19.63■□□□□ 0.73
SMPDL3A-202ENST00000487215 JMJD7P0C870 316 aa19.63■□□□□ 0.73
SMPDL3A-202ENST00000487215 LIPCP11150 499 aa19.63■□□□□ 0.73
SMPDL3A-202ENST00000487215 PRKCSHP14314 528 aaPredicted RBP19.63■□□□□ 0.73
SMPDL3A-202ENST00000487215 HTR1BP28222 390 aa19.63■□□□□ 0.73
SMPDL3A-202ENST00000487215 SRP54P61011 504 aaKnown RBP19.63■□□□□ 0.73
SMPDL3A-202ENST00000487215 RHOAP61586 193 aa19.63■□□□□ 0.73
SMPDL3A-202ENST00000487215 CAMK4Q16566 473 aa19.63■□□□□ 0.73
SMPDL3A-202ENST00000487215 TPD52L1Q16890 204 aaPredicted RBP19.63■□□□□ 0.73
SMPDL3A-202ENST00000487215 KCTD16Q68DU8 428 aa19.63■□□□□ 0.73
SMPDL3A-202ENST00000487215 XKR5Q6UX68 686 aa19.63■□□□□ 0.73
SMPDL3A-202ENST00000487215 OR6C4Q8NGE1 309 aa19.63■□□□□ 0.73
SMPDL3A-202ENST00000487215 JOSD2Q8TAC2 188 aa19.63■□□□□ 0.73
SMPDL3A-202ENST00000487215 GPT2Q8TD30 523 aa19.63■□□□□ 0.73
SMPDL3A-202ENST00000487215 CASKIN2Q8WXE0 1202 aa19.63■□□□□ 0.73
SMPDL3A-202ENST00000487215 APOOQ9BUR5 198 aa19.63■□□□□ 0.73
SMPDL3A-202ENST00000487215 KLC2Q9H0B6 622 aa19.63■□□□□ 0.73
SMPDL3A-202ENST00000487215 KLQ9UEF7 1012 aa19.63■□□□□ 0.73
SMPDL3A-202ENST00000487215 OR1A2Q9Y585 309 aa19.63■□□□□ 0.73
SMPDL3A-202ENST00000487215 C2CD4BA6NLJ0 364 aa19.62■□□□□ 0.73
SMPDL3A-202ENST00000487215 F8VZ95 297 aa19.62■□□□□ 0.73
SMPDL3A-202ENST00000487215 NVLO15381 856 aaKnown RBP19.62■□□□□ 0.73
SMPDL3A-202ENST00000487215 PIGNO95427 931 aa19.62■□□□□ 0.73
SMPDL3A-202ENST00000487215 ITGB2P05107 769 aa19.62■□□□□ 0.73
SMPDL3A-202ENST00000487215 UCHL3P15374 230 aa19.62■□□□□ 0.73
SMPDL3A-202ENST00000487215 ITIH1P19827 911 aa19.62■□□□□ 0.73
SMPDL3A-202ENST00000487215 MMP8P22894 467 aa19.62■□□□□ 0.73
SMPDL3A-202ENST00000487215 XPAP23025 273 aaPredicted RBP19.62■□□□□ 0.73
SMPDL3A-202ENST00000487215 PTPN9P43378 593 aa19.62■□□□□ 0.73
SMPDL3A-202ENST00000487215 SUOXP51687 545 aa19.62■□□□□ 0.73
SMPDL3A-202ENST00000487215 HDAC4P56524 1084 aa19.62■□□□□ 0.73
SMPDL3A-202ENST00000487215 ELP6Q0PNE2 266 aa19.62■□□□□ 0.73
SMPDL3A-202ENST00000487215 INPP5AQ14642 412 aa19.62■□□□□ 0.73
SMPDL3A-202ENST00000487215 INO80DQ53TQ3 878 aaPredicted RBP19.62■□□□□ 0.73
SMPDL3A-202ENST00000487215 STRADAQ7RTN6 431 aa19.62■□□□□ 0.73
SMPDL3A-202ENST00000487215 CCNJLQ8IV13 435 aa19.62■□□□□ 0.73
SMPDL3A-202ENST00000487215 GPR156Q8NFN8 814 aa19.62■□□□□ 0.73
SMPDL3A-202ENST00000487215 SLC20A1Q8WUM9 679 aa19.62■□□□□ 0.73
SMPDL3A-202ENST00000487215 PDXPQ96GD0 296 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms