RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 CINPQ9BW66 212 aaPredicted RBP20.52■□□□□ 0.87
HPS3-206ENST00000486530 RNF38Q9H0F5 515 aa20.52■□□□□ 0.87
HPS3-206ENST00000486530 ARL8BQ9NVJ2 186 aa20.52■□□□□ 0.87
HPS3-206ENST00000486530 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.52■□□□□ 0.87
HPS3-206ENST00000486530 LATS1O95835 1130 aa20.51■□□□□ 0.87
HPS3-206ENST00000486530 IRF1P10914 325 aa20.51■□□□□ 0.87
HPS3-206ENST00000486530 CALB2P22676 271 aa20.51■□□□□ 0.87
HPS3-206ENST00000486530 LEPRP48357 1165 aaKnown RBP20.51■□□□□ 0.87
HPS3-206ENST00000486530 CLCN5P51795 746 aa20.51■□□□□ 0.87
HPS3-206ENST00000486530 EPHB3P54753 998 aa20.51■□□□□ 0.87
HPS3-206ENST00000486530 SLC12A2P55011 1212 aa20.51■□□□□ 0.87
HPS3-206ENST00000486530 TSNAXIP1Q2TAA8 658 aa20.51■□□□□ 0.87
HPS3-206ENST00000486530 TTC7BQ86TV6 843 aa20.51■□□□□ 0.87
HPS3-206ENST00000486530 HERC6Q8IVU3 1022 aa20.51■□□□□ 0.87
HPS3-206ENST00000486530 CENPLQ8N0S6 344 aaPredicted RBP20.51■□□□□ 0.87
HPS3-206ENST00000486530 GPATCH11Q8N954 259 aa20.51■□□□□ 0.87
HPS3-206ENST00000486530 SPON2Q9BUD6 331 aa20.51■□□□□ 0.87
HPS3-206ENST00000486530 OXSMQ9NWU1 459 aa20.51■□□□□ 0.87
HPS3-206ENST00000486530 INSL5Q9Y5Q6 135 aa20.51■□□□□ 0.87
HPS3-206ENST00000486530 LDB2O43679 373 aa20.5■□□□□ 0.87
HPS3-206ENST00000486530 GJB3O75712 270 aa20.5■□□□□ 0.87
HPS3-206ENST00000486530 ALOX15P16050 662 aaPredicted RBP20.5■□□□□ 0.87
HPS3-206ENST00000486530 SGSHP51688 502 aa20.5■□□□□ 0.87
HPS3-206ENST00000486530 KPNA2P52292 529 aaKnown RBP20.5■□□□□ 0.87
HPS3-206ENST00000486530 ILF2Q12905 390 aaKnown RBP20.5■□□□□ 0.87
HPS3-206ENST00000486530 LRRC8EQ6NSJ5 796 aa20.5■□□□□ 0.87
HPS3-206ENST00000486530 DNAJB7Q7Z6W7 309 aaPredicted RBP20.5■□□□□ 0.87
HPS3-206ENST00000486530 CEP97Q8IW35 865 aa20.5■□□□□ 0.87
HPS3-206ENST00000486530 SUGP1Q8IWZ8 645 aaKnown RBP20.5■□□□□ 0.87
HPS3-206ENST00000486530 KCTD4Q8WVF5 259 aa20.5■□□□□ 0.87
HPS3-206ENST00000486530 SCYL1Q96KG9 808 aa20.5■□□□□ 0.87
HPS3-206ENST00000486530 RILPQ96NA2 401 aa20.5■□□□□ 0.87
HPS3-206ENST00000486530 YME1L1Q96TA2 773 aa20.5■□□□□ 0.87
HPS3-206ENST00000486530 STOML2Q9UJZ1 356 aa20.5■□□□□ 0.87
HPS3-206ENST00000486530 RUVBL2Q9Y230 463 aaKnown RBP20.5■□□□□ 0.87
HPS3-206ENST00000486530 TBC1D30Q9Y2I9 924 aa20.5■□□□□ 0.87
HPS3-206ENST00000486530 TK2O00142 265 aa20.5■□□□□ 0.87
HPS3-206ENST00000486530 SERPINA6P08185 405 aa20.5■□□□□ 0.87
HPS3-206ENST00000486530 EN2P19622 333 aaPredicted RBP20.5■□□□□ 0.87
HPS3-206ENST00000486530 ARRB2P32121 409 aa20.5■□□□□ 0.87
HPS3-206ENST00000486530 PPM1AP35813 382 aa20.5■□□□□ 0.87
HPS3-206ENST00000486530 TAS2R39P59534 338 aa20.5■□□□□ 0.87
HPS3-206ENST00000486530 PRAMEP78395 509 aa20.5■□□□□ 0.87
HPS3-206ENST00000486530 ACVR1Q04771 509 aa20.5■□□□□ 0.87
HPS3-206ENST00000486530 TBCCQ15814 346 aa20.5■□□□□ 0.87
HPS3-206ENST00000486530 LIPMQ5VYY2 423 aa20.5■□□□□ 0.87
HPS3-206ENST00000486530 CILP2Q8IUL8 1156 aa20.5■□□□□ 0.87
HPS3-206ENST00000486530 GPR65Q8IYL9 337 aa20.5■□□□□ 0.87
HPS3-206ENST00000486530 STYXQ8WUJ0 223 aa20.5■□□□□ 0.87
HPS3-206ENST00000486530 UTP4Q969X6 686 aaKnown RBP20.5■□□□□ 0.87
HPS3-206ENST00000486530 TBC1D10AQ9BXI6 508 aa20.5■□□□□ 0.87
HPS3-206ENST00000486530 TLE6Q9H808 572 aa20.5■□□□□ 0.87
HPS3-206ENST00000486530 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.5■□□□□ 0.87
HPS3-206ENST00000486530 MRPL17Q9NRX2 175 aaKnown RBP20.5■□□□□ 0.87
HPS3-206ENST00000486530 DNAJC28Q9NX36 388 aa20.5■□□□□ 0.87
HPS3-206ENST00000486530 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.5■□□□□ 0.87
HPS3-206ENST00000486530 CPSF2Q9P2I0 782 aaKnown RBP20.5■□□□□ 0.87
HPS3-206ENST00000486530 KLHL2O95198 593 aa20.49■□□□□ 0.87
HPS3-206ENST00000486530 HSPA4LO95757 839 aa20.49■□□□□ 0.87
HPS3-206ENST00000486530 NDST3O95803 873 aa20.49■□□□□ 0.87
HPS3-206ENST00000486530 MBL2P11226 248 aaPredicted RBP20.49■□□□□ 0.87
HPS3-206ENST00000486530 CREMQ03060 361 aa20.49■□□□□ 0.87
HPS3-206ENST00000486530 CNSTQ6PJW8 725 aa20.49■□□□□ 0.87
HPS3-206ENST00000486530 ZNF783Q6ZMS7 281 aa20.49■□□□□ 0.87
HPS3-206ENST00000486530 ITIH5Q86UX2 942 aa20.49■□□□□ 0.87
HPS3-206ENST00000486530 TMEM151AQ8N4L1 468 aa20.49■□□□□ 0.87
HPS3-206ENST00000486530 TSPAN17Q96FV3 270 aa20.49■□□□□ 0.87
HPS3-206ENST00000486530 OMDQ99983 421 aa20.49■□□□□ 0.87
HPS3-206ENST00000486530 NOD2Q9HC29 1040 aa20.49■□□□□ 0.87
HPS3-206ENST00000486530 BAIAP2L1Q9UHR4 511 aa20.49■□□□□ 0.87
HPS3-206ENST00000486530 RIMKLBQ9ULI2 386 aa20.49■□□□□ 0.87
HPS3-206ENST00000486530 SORCS3Q9UPU3 1222 aa20.49■□□□□ 0.87
HPS3-206ENST00000486530 PTPRSQ13332 1948 aa20.49■□□□□ 0.87
HPS3-206ENST00000486530 CAPN14A8MX76 684 aa20.48■□□□□ 0.87
HPS3-206ENST00000486530 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.48■□□□□ 0.87
HPS3-206ENST00000486530 NUMBP49757 651 aa20.48■□□□□ 0.87
HPS3-206ENST00000486530 ZNF460Q14592 562 aa20.48■□□□□ 0.87
HPS3-206ENST00000486530 ATG14Q6ZNE5 492 aa20.48■□□□□ 0.87
HPS3-206ENST00000486530 TMEM150AQ86TG1 271 aa20.48■□□□□ 0.87
HPS3-206ENST00000486530 FSTL5Q8N475 847 aaPredicted RBP20.48■□□□□ 0.87
HPS3-206ENST00000486530 OR6P1Q8NGX9 317 aa20.48■□□□□ 0.87
HPS3-206ENST00000486530 MAGEC3Q8TD91 643 aa20.48■□□□□ 0.87
HPS3-206ENST00000486530 BRSK1Q8TDC3 778 aa20.48■□□□□ 0.87
HPS3-206ENST00000486530 HDAC10Q969S8 669 aa20.48■□□□□ 0.87
HPS3-206ENST00000486530 TRIB3Q96RU7 358 aa20.48■□□□□ 0.87
HPS3-206ENST00000486530 EBF4Q9BQW3 602 aa20.48■□□□□ 0.87
HPS3-206ENST00000486530 PNPOQ9NVS9 261 aa20.48■□□□□ 0.87
HPS3-206ENST00000486530 STK39Q9UEW8 545 aa20.48■□□□□ 0.87
HPS3-206ENST00000486530 DENND4CQ5VZ89 1909 aa20.48■□□□□ 0.87
HPS3-206ENST00000486530 AURKAO14965 403 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 SBK3P0C264 359 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 ESRRAP11474 423 aaPredicted RBP20.47■□□□□ 0.87
HPS3-206ENST00000486530 CES1P23141 567 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 GLDCP23378 1020 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 GLRBP48167 497 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 GALNT3Q14435 633 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 NAPRTQ6XQN6 538 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 PTAR1Q7Z6K3 402 aaPredicted RBP20.47■□□□□ 0.87
HPS3-206ENST00000486530 BLOC1S5Q8TDH9 187 aa20.47■□□□□ 0.87
HPS3-206ENST00000486530 AUTS2Q8WXX7 1259 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms