RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 SLC20A2Q08357 652 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 OVGP1Q12889 678 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 PPIGQ13427 754 aaKnown RBP eCLIP12.05□□□□□ -0.481e-6■■■■□ 25.5
PKP4-213ENST00000486254 SEPT6Q14141 434 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 CES4AQ5XG92 561 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 IL31Q6EBC2 164 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 HTR3DQ70Z44 454 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 ARID3BQ8IVW6 561 aaPredicted RBP12.05□□□□□ -0.48
PKP4-213ENST00000486254 KIRREL3Q8IZU9 778 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 CENPLQ8N0S6 344 aaPredicted RBP12.05□□□□□ -0.48
PKP4-213ENST00000486254 CFAP52Q8N1V2 620 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 OR7D4Q8NG98 312 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 USP13Q92995 863 aaPredicted RBP12.05□□□□□ -0.48
PKP4-213ENST00000486254 RAB3IPQ96QF0 476 aaPredicted RBP12.05□□□□□ -0.48
PKP4-213ENST00000486254 LRRC3Q9BY71 257 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 TLE6Q9H808 572 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 POPDC3Q9HBV1 291 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 OXSMQ9NWU1 459 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 DNAJC28Q9NX36 388 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.05□□□□□ -0.48
PKP4-213ENST00000486254 DCTN4Q9UJW0 460 aa12.05□□□□□ -0.48
PKP4-213ENST00000486254 LSM7Q9UK45 103 aaKnown RBP12.05□□□□□ -0.48
PKP4-213ENST00000486254 MTCL1Q9Y4B5 1905 aaKnown RBP12.04□□□□□ -0.48
PKP4-213ENST00000486254 CCDC189A1A4V9 331 aa12.04□□□□□ -0.48
PKP4-213ENST00000486254 RPP40O75818 363 aaKnown RBP12.04□□□□□ -0.48
PKP4-213ENST00000486254 LUC7L3O95232 432 aaKnown RBP12.04□□□□□ -0.48
PKP4-213ENST00000486254 WISP3O95389 354 aaPredicted RBP12.04□□□□□ -0.48
PKP4-213ENST00000486254 CRTAMO95727 393 aa12.04□□□□□ -0.48
PKP4-213ENST00000486254 ABCE1P61221 599 aaKnown RBP12.04□□□□□ -0.48
PKP4-213ENST00000486254 PRAMEP78395 509 aa12.04□□□□□ -0.48
PKP4-213ENST00000486254 MPP1Q00013 466 aa12.04□□□□□ -0.48
PKP4-213ENST00000486254 TYSND1Q2T9J0 566 aa12.04□□□□□ -0.48
PKP4-213ENST00000486254 LIPMQ5VYY2 423 aa12.04□□□□□ -0.48
PKP4-213ENST00000486254 MRNIPQ6NTE8 343 aa12.04□□□□□ -0.48
PKP4-213ENST00000486254 C16orf46Q6P387 395 aa12.04□□□□□ -0.48
PKP4-213ENST00000486254 CYB5D1Q6P9G0 228 aa12.04□□□□□ -0.48
PKP4-213ENST00000486254 TMC8Q8IU68 726 aa12.04□□□□□ -0.48
PKP4-213ENST00000486254 C10orf107Q8IVU9 208 aa12.04□□□□□ -0.48
PKP4-213ENST00000486254 DENND6AQ8IWF6 608 aa12.04□□□□□ -0.48
PKP4-213ENST00000486254 PLD6Q8N2A8 252 aaKnown RBP12.04□□□□□ -0.48
PKP4-213ENST00000486254 TMEM151AQ8N4L1 468 aa12.04□□□□□ -0.48
PKP4-213ENST00000486254 FIBCD1Q8N539 461 aa12.04□□□□□ -0.48
PKP4-213ENST00000486254 SLC25A41Q8N5S1 370 aa12.04□□□□□ -0.48
PKP4-213ENST00000486254 OR52K2Q8NGK3 314 aa12.04□□□□□ -0.48
PKP4-213ENST00000486254 ADAMTS19Q8TE59 1207 aa12.04□□□□□ -0.48
PKP4-213ENST00000486254 PDCD6IPQ8WUM4 868 aaKnown RBP12.04□□□□□ -0.48
PKP4-213ENST00000486254 MRPS31Q92665 395 aaKnown RBP12.04□□□□□ -0.48
PKP4-213ENST00000486254 CCDC126Q96EE4 140 aa12.04□□□□□ -0.48
PKP4-213ENST00000486254 GPR78Q96P69 363 aa12.04□□□□□ -0.48
PKP4-213ENST00000486254 SORT1Q99523 831 aa12.04□□□□□ -0.48
PKP4-213ENST00000486254 MRPL57Q9BQC6 102 aaKnown RBP12.04□□□□□ -0.48
PKP4-213ENST00000486254 TDRD1Q9BXT4 1180 aaKnown RBP12.04□□□□□ -0.48
PKP4-213ENST00000486254 MRPL46Q9H2W6 279 aaKnown RBP12.04□□□□□ -0.48
PKP4-213ENST00000486254 ATXN3LQ9H3M9 355 aa12.04□□□□□ -0.48
PKP4-213ENST00000486254 ZNF334Q9HCZ1 680 aaPredicted RBP12.04□□□□□ -0.48
PKP4-213ENST00000486254 PLSCR2Q9NRY7 297 aa12.04□□□□□ -0.48
PKP4-213ENST00000486254 HACD3Q9P035 362 aa12.04□□□□□ -0.48
PKP4-213ENST00000486254 HEY2Q9UBP5 337 aa12.04□□□□□ -0.48
PKP4-213ENST00000486254 ZMYM5Q9UJ78 669 aa12.04□□□□□ -0.48
PKP4-213ENST00000486254 INSL6Q9Y581 213 aa12.04□□□□□ -0.48
PKP4-213ENST00000486254 OR51B4Q9Y5P0 310 aa12.04□□□□□ -0.48
PKP4-213ENST00000486254 TGM5O43548 720 aa12.03□□□□□ -0.48
PKP4-213ENST00000486254 PENKP01210 267 aaPredicted RBP12.03□□□□□ -0.48
PKP4-213ENST00000486254 SERPINA6P08185 405 aa12.03□□□□□ -0.48
PKP4-213ENST00000486254 CNPP09543 421 aaKnown RBP12.03□□□□□ -0.48
PKP4-213ENST00000486254 T-ENOLP0DO92 83 aa12.03□□□□□ -0.48
PKP4-213ENST00000486254 KCNA4P22459 653 aa12.03□□□□□ -0.48
PKP4-213ENST00000486254 CALB2P22676 271 aa12.03□□□□□ -0.48
PKP4-213ENST00000486254 DDX6P26196 483 aaKnown RBP eCLIP12.03□□□□□ -0.48
PKP4-213ENST00000486254 MAPK8P45983 427 aa12.03□□□□□ -0.48
PKP4-213ENST00000486254 CSNK1DP48730 415 aa12.03□□□□□ -0.48
PKP4-213ENST00000486254 SUOXP51687 545 aa12.03□□□□□ -0.48
PKP4-213ENST00000486254 ZNF140P52738 457 aaPredicted RBP12.03□□□□□ -0.48
PKP4-213ENST00000486254 EPHA5P54756 1037 aa12.03□□□□□ -0.48
PKP4-213ENST00000486254 SLC12A2P55011 1212 aa12.03□□□□□ -0.48
PKP4-213ENST00000486254 DNAJB13P59910 316 aa12.03□□□□□ -0.48
PKP4-213ENST00000486254 RPL26P61254 145 aaKnown RBP12.03□□□□□ -0.48
PKP4-213ENST00000486254 AP1S1P61966 158 aa12.03□□□□□ -0.48
PKP4-213ENST00000486254 CTBP1Q13363 440 aa12.03□□□□□ -0.48
PKP4-213ENST00000486254 TAF1AQ15573 450 aaPredicted RBP12.03□□□□□ -0.48
PKP4-213ENST00000486254 DLG2Q15700 870 aa12.03□□□□□ -0.48
PKP4-213ENST00000486254 FAM45BPQ6NSW5 357 aa12.03□□□□□ -0.48
PKP4-213ENST00000486254 RAPH1Q70E73 1250 aa12.03□□□□□ -0.48
PKP4-213ENST00000486254 MTDHQ86UE4 582 aaKnown RBP12.03□□□□□ -0.48
PKP4-213ENST00000486254 MFSD6LQ8IWD5 586 aa12.03□□□□□ -0.48
PKP4-213ENST00000486254 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.03□□□□□ -0.48
PKP4-213ENST00000486254 FAM45AQ8TCE6 357 aa12.03□□□□□ -0.48
PKP4-213ENST00000486254 MAGEC3Q8TD91 643 aa12.03□□□□□ -0.48
PKP4-213ENST00000486254 ACDQ96AP0 544 aa12.03□□□□□ -0.48
PKP4-213ENST00000486254 TCF12Q99081 682 aa12.03□□□□□ -0.48
PKP4-213ENST00000486254 CAB39LQ9H9S4 337 aa12.03□□□□□ -0.48
PKP4-213ENST00000486254 GKN1Q9NS71 199 aa12.03□□□□□ -0.48
PKP4-213ENST00000486254 KLC4Q9NSK0 619 aa12.03□□□□□ -0.48
PKP4-213ENST00000486254 INTS10Q9NVR2 710 aaKnown RBP12.03□□□□□ -0.48
PKP4-213ENST00000486254 NLE1Q9NVX2 485 aaPredicted RBP12.03□□□□□ -0.48
PKP4-213ENST00000486254 VPS9D1Q9Y2B5 631 aa12.03□□□□□ -0.48
PKP4-213ENST00000486254 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.03□□□□□ -0.48
PKP4-213ENST00000486254 RWDD3Q9Y3V2 267 aa12.03□□□□□ -0.48
PKP4-213ENST00000486254 ANKRD36A6QL64 1941 aa12.03□□□□□ -0.48
PKP4-213ENST00000486254 CCDC195A0A1B0GUA6 201 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms