RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 CAMK2BQ13554 666 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 LBRQ14739 615 aaKnown RBP13.07□□□□□ -0.32
SSR4-211ENST00000486204 LLGL1Q15334 1064 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 MYLK3Q32MK0 819 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 POM121L1PQ3SYA9 428 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 ARSIQ5FYB1 569 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 TFDP3Q5H9I0 405 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 PIP5KL1Q5T9C9 394 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 DCAF12L1Q5VU92 463 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 FAM46CQ5VWP2 391 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 PEX26Q7Z412 305 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 RFX6Q8HWS3 928 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 LRRC49Q8IUZ0 686 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 RCOR2Q8IZ40 523 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 RGL4Q8IZJ4 473 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 SYCE1Q8N0S2 351 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 PGBD5Q8N414 524 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 TEX26Q8N6G2 289 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 PDCD7Q8N8D1 485 aaKnown RBP13.07□□□□□ -0.32
SSR4-211ENST00000486204 LRRN4Q8WUT4 740 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 MAML1Q92585 1016 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 HES6Q96HZ4 224 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 ZNF830Q96NB3 372 aaPredicted RBP13.07□□□□□ -0.32
SSR4-211ENST00000486204 PSKH2Q96QS6 385 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 CINPQ9BW66 212 aaPredicted RBP13.07□□□□□ -0.32
SSR4-211ENST00000486204 GPR174Q9BXC1 333 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 LZTFL1Q9NQ48 299 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.07□□□□□ -0.32
SSR4-211ENST00000486204 FARP1Q9Y4F1 1045 aaPredicted RBP13.07□□□□□ -0.32
SSR4-211ENST00000486204 NAV2Q8IVL1 2488 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 PTPRBP23467 1997 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 LRP4O75096 1905 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 MIF4GDA9UHW6 222 aaKnown RBP13.06□□□□□ -0.32
SSR4-211ENST00000486204 KPNA3O00505 521 aaPredicted RBP13.06□□□□□ -0.32
SSR4-211ENST00000486204 KRIT1O00522 736 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 SLC7A4O43246 635 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 CST8O60676 142 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 RNASEH2AO75792 299 aaKnown RBP13.06□□□□□ -0.32
SSR4-211ENST00000486204 POP4O95707 220 aaKnown RBP13.06□□□□□ -0.32
SSR4-211ENST00000486204 SEMA4FO95754 770 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 ATXN1LP0C7T5 689 aaKnown RBP13.06□□□□□ -0.32
SSR4-211ENST00000486204 PYGMP11217 842 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 GNSP15586 552 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 CR2P20023 1033 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 ITGB7P26010 798 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 PTPN7P35236 360 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 CSNK1DP48730 415 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 COPS2P61201 443 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 DYNLT1P63172 113 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 CFHR1Q03591 330 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 PPIDQ08752 370 aaKnown RBP13.06□□□□□ -0.32
SSR4-211ENST00000486204 ODF2Q5BJF6 829 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 AADACL2Q6P093 401 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 BBS12Q6ZW61 710 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 PARS2Q7L3T8 475 aaKnown RBP13.06□□□□□ -0.32
SSR4-211ENST00000486204 CADM4Q8NFZ8 388 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.06□□□□□ -0.32
SSR4-211ENST00000486204 ANP32BQ92688 251 aaKnown RBP13.06□□□□□ -0.32
SSR4-211ENST00000486204 HSPA12BQ96MM6 686 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 FCRL3Q96P31 734 aaPredicted RBP13.06□□□□□ -0.32
SSR4-211ENST00000486204 OMDQ99983 421 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 MGME1Q9BQP7 344 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 ZDHHC5Q9C0B5 715 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 BTBD1Q9H0C5 482 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 PCED1AQ9H1Q7 454 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 CLMPQ9H6B4 373 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 C6orf106Q9H6K1 298 aaPredicted RBP13.06□□□□□ -0.32
SSR4-211ENST00000486204 SGK2Q9HBY8 427 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 TOR4AQ9NXH8 423 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 SUSD2Q9UGT4 822 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 SEPT3Q9UH03 358 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 AMFRQ9UKV5 643 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 NCKAP1Q9Y2A7 1128 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 HEY1Q9Y5J3 304 aa13.06□□□□□ -0.32
SSR4-211ENST00000486204 KNL1Q8NG31 2342 aa13.05□□□□□ -0.32
SSR4-211ENST00000486204 FAM149AA5PLN7 773 aa13.05□□□□□ -0.32
SSR4-211ENST00000486204 GOLGA8CPA6NN73 597 aa13.05□□□□□ -0.32
SSR4-211ENST00000486204 METTL12A8MUP2 240 aa13.05□□□□□ -0.32
SSR4-211ENST00000486204 SPINT1O43278 529 aa13.05□□□□□ -0.32
SSR4-211ENST00000486204 PLRG1O43660 514 aaKnown RBP13.05□□□□□ -0.32
SSR4-211ENST00000486204 NDUFS2O75306 463 aa13.05□□□□□ -0.32
SSR4-211ENST00000486204 DKK1O94907 266 aa13.05□□□□□ -0.32
SSR4-211ENST00000486204 UGT2B4P06133 528 aa13.05□□□□□ -0.32
SSR4-211ENST00000486204 IGHV4-34P06331 123 aa13.05□□□□□ -0.32
SSR4-211ENST00000486204 ZFXP17010 805 aaPredicted RBP13.05□□□□□ -0.32
SSR4-211ENST00000486204 MX2P20592 715 aa13.05□□□□□ -0.32
SSR4-211ENST00000486204 TGM2P21980 687 aa13.05□□□□□ -0.32
SSR4-211ENST00000486204 CCNCP24863 283 aa13.05□□□□□ -0.32
SSR4-211ENST00000486204 RWDD2BP57060 319 aa13.05□□□□□ -0.32
SSR4-211ENST00000486204 NSUN2Q08J23 767 aaKnown RBP eCLIP13.05□□□□□ -0.32
SSR4-211ENST00000486204 GRIK2Q13002 908 aa13.05□□□□□ -0.32
SSR4-211ENST00000486204 TFDP2Q14188 446 aa13.05□□□□□ -0.32
SSR4-211ENST00000486204 KAZNQ674X7 775 aa13.05□□□□□ -0.32
SSR4-211ENST00000486204 TIGD7Q6NT04 549 aaPredicted RBP13.05□□□□□ -0.32
SSR4-211ENST00000486204 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.05□□□□□ -0.32
SSR4-211ENST00000486204 LRRC69Q6ZNQ3 347 aa13.05□□□□□ -0.32
SSR4-211ENST00000486204 SRLQ86TD4 932 aa13.05□□□□□ -0.32
SSR4-211ENST00000486204 CCDC50Q8IVM0 306 aa13.05□□□□□ -0.32
SSR4-211ENST00000486204 RYBPQ8N488 228 aaPredicted RBP13.05□□□□□ -0.32
SSR4-211ENST00000486204 GANCQ8TET4 914 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms