RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 CNTD1Q8N815 330 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 UBE2Q2Q8WVN8 375 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 HTR3CQ8WXA8 447 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 TCEAL3Q969E4 200 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 RAB7BQ96AH8 199 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 AGAP3Q96P47 875 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 CARD9Q9H257 536 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 KDM4CQ9H3R0 1056 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 VPS45Q9NRW7 570 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 SEMA4GQ9NTN9 838 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 KLHL8Q9P2G9 620 aaPredicted RBP11.95□□□□□ -0.5
HPS4-214ENST00000485842 SUSD2Q9UGT4 822 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 PILRBQ9UKJ0 227 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 R3HDM2Q9Y2K5 976 aaKnown RBP11.95□□□□□ -0.5
HPS4-214ENST00000485842 ATP8A1Q9Y2Q0 1164 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 PCDHB9Q9Y5E1 797 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 SLCO1B1Q9Y6L6 691 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 F5H423 210 aaPredicted RBP11.94□□□□□ -0.5
HPS4-214ENST00000485842 TRAFD1O14545 582 aaPredicted RBP11.94□□□□□ -0.5
HPS4-214ENST00000485842 SPINT1O43278 529 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 MTSS1O43312 755 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 AP1G1O43747 822 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 SERPINF2P08697 491 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 GNSP15586 552 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 PRLRP16471 622 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 CD27P26842 260 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 RBL1P28749 1068 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 CXCR5P32302 372 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 CD86P42081 329 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 FAM193AP78312 1265 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 WASHC5Q12768 1159 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 KLF1Q13351 362 aaPredicted RBP11.94□□□□□ -0.5
HPS4-214ENST00000485842 UGP2Q16851 508 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 TEX44Q53QW1 395 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 TRIM61Q5EBN2 209 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 PLA2G2CQ5R387 149 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 ARMC12Q5T9G4 340 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 ERAP2Q6P179 960 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 DARS2Q6PI48 645 aaKnown RBP11.94□□□□□ -0.5
HPS4-214ENST00000485842 PRPF39Q86UA1 669 aaKnown RBP11.94□□□□□ -0.5
HPS4-214ENST00000485842 TRIM69Q86WT6 500 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 HORMAD1Q86X24 394 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 SLC13A5Q86YT5 568 aaPredicted RBP11.94□□□□□ -0.5
HPS4-214ENST00000485842 C12orf50Q8NA57 414 aaPredicted RBP11.94□□□□□ -0.5
HPS4-214ENST00000485842 TTC13Q8NBP0 860 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 ARRDC2Q8TBH0 407 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 DNASE2BQ8WZ79 361 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 ECHDC3Q96DC8 303 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 MYOCQ99972 504 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 WRAP53Q9BUR4 548 aaKnown RBP11.94□□□□□ -0.5
HPS4-214ENST00000485842 EBF2Q9HAK2 575 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 PCDH12Q9NPG4 1184 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 JRKLQ9Y4A0 524 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 RAI2Q9Y5P3 530 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 DOCK9Q9BZ29 2069 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 TRPM6Q9BX84 2022 aa11.94□□□□□ -0.5
HPS4-214ENST00000485842 A0A1B0GTW7 788 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 A0A1W2PPC4 97 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 AREL1O15033 823 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 SLC31A1O15431 190 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 KCNN4O15554 427 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 HTRA2O43464 458 aaPredicted RBP11.93□□□□□ -0.5
HPS4-214ENST00000485842 LATO43561 262 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 TSPAN6O43657 245 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 CEP104O60308 925 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 MMP20O60882 483 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 LRP3O75074 770 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 STK10O94804 968 aaKnown RBP11.93□□□□□ -0.5
HPS4-214ENST00000485842 ATP1A1P05023 1023 aaKnown RBP11.93□□□□□ -0.5
HPS4-214ENST00000485842 ZNF806P0C7X5 589 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 NFKB1P19838 968 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 CA4P22748 312 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 CES1P23141 567 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 MSNP26038 577 aaKnown RBP11.93□□□□□ -0.5
HPS4-214ENST00000485842 HOXD12P35452 270 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 POLR2LP62875 67 aaKnown RBP11.93□□□□□ -0.5
HPS4-214ENST00000485842 ELP6Q0PNE2 266 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 CSRP2Q16527 193 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 DUOXA1Q1HG43 343 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 SETMARQ53H47 684 aaPredicted RBP11.93□□□□□ -0.5
HPS4-214ENST00000485842 PEAR1Q5VY43 1037 aaPredicted RBP11.93□□□□□ -0.5
HPS4-214ENST00000485842 KIAA1161Q6NSJ0 714 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 NEK5Q6P3R8 708 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 LAYNQ6UX15 382 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 KIAA2013Q8IYS2 634 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 ZNF567Q8N184 647 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 HCAR2Q8TDS4 363 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 CXorf40AQ8TE69 158 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 ATG4AQ8WYN0 398 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 FEM1CQ96JP0 617 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 SERAC1Q96JX3 654 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 SLC6A18Q96N87 628 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 RBM15Q96T37 977 aaKnown RBP eCLIP11.93□□□□□ -0.56e-7■■■■□ 24.4
HPS4-214ENST00000485842 FERMT1Q9BQL6 677 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 GLOD4Q9HC38 313 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 TM9SF3Q9HD45 589 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 FZD3Q9NPG1 666 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 FSCN3Q9NQT6 498 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 AASDHPPTQ9NRN7 309 aa11.93□□□□□ -0.5
HPS4-214ENST00000485842 TPX2Q9ULW0 747 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms