RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 SERPINF1P36955 418 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 CCT6AP40227 531 aaKnown RBP4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 MLH1P40692 756 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 DPP6P42658 865 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 PSMD7P51665 324 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 GBX2P52951 348 aaPredicted RBP4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 PLTPP55058 493 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 HDAC4P56524 1084 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 SLC8A3P57103 927 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 STARD6P59095 220 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 ST5P78524 1137 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 DSG1Q02413 1049 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 CREMQ03060 361 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 UBE3AQ05086 875 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 LRRC63Q05C16 580 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 C17orf67Q0P5P2 114 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 EPS8Q12929 822 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 CUL1Q13616 776 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 PMS2P11Q13670 270 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 EFTUD2Q15029 972 aaKnown RBP eCLIP4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 GPR19Q15760 415 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 KYNUQ16719 465 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 MPEG1Q2M385 716 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 SLC5A9Q2M3M2 681 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 ASTE1Q2TB18 679 aaPredicted RBP4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 LRIT3Q3SXY7 679 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 CCDC14Q49A88 953 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 MIIPQ5JXC2 388 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 RBM20Q5T481 1227 aaKnown RBP4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 MAP3K21Q5TCX8 1036 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 TAF2Q6P1X5 1199 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 SLC22A25Q6T423 547 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 KLHL24Q6TFL4 600 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 MTHFD1LQ6UB35 978 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 CCNI2Q6ZMN8 369 aaPredicted RBP4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 UNC13DQ70J99 1090 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 MAMDC2Q7Z304 686 aaPredicted RBP4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 PLEKHH3Q7Z736 793 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 TAF8Q7Z7C8 310 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 ZC3H7AQ8IWR0 971 aaKnown RBP4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 ZC3H3Q8IXZ2 948 aaKnown RBP4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 GUF1Q8N442 669 aaKnown RBP4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 KLHL36Q8N4N3 616 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 RNF10Q8N5U6 811 aaKnown RBP4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 EIF1ADQ8N9N8 165 aaKnown RBP4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 CCDC26Q8TAB7 109 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 SPPL3Q8TCT6 385 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 LRRC15Q8TF66 581 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 SLC5A11Q8WWX8 675 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 SYN2Q92777 582 aaPredicted RBP4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 SLC5A5Q92911 643 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 CUL5Q93034 780 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 FAM120BQ96EK7 910 aaKnown RBP4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 SIPA1Q96FS4 1042 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 SCLYQ96I15 445 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 GNRHR2Q96P88 292 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 LENG8Q96PV6 779 aaPredicted RBP4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 RAB3IPQ96QF0 476 aaPredicted RBP4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 TUBGCP2Q9BSJ2 902 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 NFKBIZQ9BYH8 718 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 ABCG8Q9H221 673 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 DENND2DQ9H6A0 471 aaPredicted RBP4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 KAT14Q9H8E8 782 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 PFDN4Q9NQP4 134 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 IL17RBQ9NRM6 502 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 SLC35D1Q9NTN3 355 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 GDAP2Q9NXN4 497 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 AMACRQ9UHK6 382 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 NARFQ9UHQ1 456 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 SRPK3Q9UPE1 567 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 GDAQ9Y2T3 454 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 C15orf41Q9Y2V0 281 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 COQ6Q9Y2Z9 468 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 SPATA31A5Q5VU36 1347 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 SPATA31A7Q8IWB4 1347 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 ZNF335Q9H4Z2 1342 aaPredicted RBP4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 IQANK1A0A1B0GTG1 560 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 NCF1BA6NI72 391 aaPredicted RBP4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 SRRM3A6NNA2 597 aaPredicted RBP4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 LRRIQ3A6PVS8 624 aaPredicted RBP4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 NCF1CA8MVU1 366 aaPredicted RBP4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 PTGES3LE9PB15 166 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 ARVCFO00192 962 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 CBX4O00257 560 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 TRIM38O00635 465 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 CES2O00748 559 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 NVLO15381 856 aaKnown RBP4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 ZSCAN9O15535 394 aaPredicted RBP4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 FOXS1O43638 330 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 TBC1D4O60343 1298 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 PLA2G6O60733 806 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 PHF2O75151 1096 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 TBX10O75333 385 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 H2AFYO75367 372 aaKnown RBP4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 RPS6KA4O75676 772 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 BAG3O95817 575 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 SYF2O95926 243 aaKnown RBP4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 KRT14P02533 472 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 OR52Z1P0C646 297 aa4.11□□□□□ -1.75
PRPF38B-205ENST00000485810 SNHG28P0DPA3 235 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms