RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 CAMK1DQ8IU85 385 aa17.95■□□□□ 0.46
SREBF1-213ENST00000485080 CCNYQ8ND76 341 aa17.95■□□□□ 0.46
SREBF1-213ENST00000485080 SNX19Q92543 992 aa17.95■□□□□ 0.46
SREBF1-213ENST00000485080 OSBPL8Q9BZF1 889 aa17.95■□□□□ 0.46
SREBF1-213ENST00000485080 NOD2Q9HC29 1040 aa17.95■□□□□ 0.46
SREBF1-213ENST00000485080 RXFP3Q9NSD7 469 aa17.95■□□□□ 0.46
SREBF1-213ENST00000485080 RBM22Q9NW64 420 aaKnown RBP eCLIP17.95■□□□□ 0.46
SREBF1-213ENST00000485080 ZFR2Q9UPR6 939 aaKnown RBP17.95■□□□□ 0.46
SREBF1-213ENST00000485080 ATP8A1Q9Y2Q0 1164 aa17.95■□□□□ 0.46
SREBF1-213ENST00000485080 SLCO1B1Q9Y6L6 691 aa17.95■□□□□ 0.46
SREBF1-213ENST00000485080 CFAP69A5D8W1 941 aa17.94■□□□□ 0.46
SREBF1-213ENST00000485080 UPK3BL1B0FP48 263 aa17.94■□□□□ 0.46
SREBF1-213ENST00000485080 UPK3BL2E5RIL1 263 aa17.94■□□□□ 0.46
SREBF1-213ENST00000485080 PRAMEF26H0Y7S4 382 aa17.94■□□□□ 0.46
SREBF1-213ENST00000485080 APOC4-APOC2K7ER74 178 aa17.94■□□□□ 0.46
SREBF1-213ENST00000485080 VILLO15195 856 aa17.94■□□□□ 0.46
SREBF1-213ENST00000485080 DDX3YO15523 660 aaKnown RBP17.94■□□□□ 0.46
SREBF1-213ENST00000485080 PCDH8O95206 1070 aa17.94■□□□□ 0.46
SREBF1-213ENST00000485080 APOC2P02655 101 aa17.94■□□□□ 0.46
SREBF1-213ENST00000485080 ENGP17813 658 aa17.94■□□□□ 0.46
SREBF1-213ENST00000485080 DYNLT1P63172 113 aa17.94■□□□□ 0.46
SREBF1-213ENST00000485080 ELP6Q0PNE2 266 aa17.94■□□□□ 0.46
SREBF1-213ENST00000485080 OVGP1Q12889 678 aa17.94■□□□□ 0.46
SREBF1-213ENST00000485080 PRKD1Q15139 912 aaPredicted RBP17.94■□□□□ 0.46
SREBF1-213ENST00000485080 TEAD4Q15561 434 aa17.94■□□□□ 0.46
SREBF1-213ENST00000485080 NAPEPLDQ6IQ20 393 aa17.94■□□□□ 0.46
SREBF1-213ENST00000485080 NPNTQ6UXI9 565 aa17.94■□□□□ 0.46
SREBF1-213ENST00000485080 CCDC50Q8IVM0 306 aa17.94■□□□□ 0.46
SREBF1-213ENST00000485080 TMEM145Q8NBT3 493 aa17.94■□□□□ 0.46
SREBF1-213ENST00000485080 P3H4Q92791 437 aa17.94■□□□□ 0.46
SREBF1-213ENST00000485080 EDEM2Q9BV94 578 aa17.94■□□□□ 0.46
SREBF1-213ENST00000485080 C1QTNF2Q9BXJ5 285 aa17.94■□□□□ 0.46
SREBF1-213ENST00000485080 NT5MQ9NPB1 228 aa17.94■□□□□ 0.46
SREBF1-213ENST00000485080 SCUBE2Q9NQ36 999 aa17.94■□□□□ 0.46
SREBF1-213ENST00000485080 DLL3Q9NYJ7 618 aa17.94■□□□□ 0.46
SREBF1-213ENST00000485080 GUCA1BQ9UMX6 200 aa17.94■□□□□ 0.46
SREBF1-213ENST00000485080 ANKRD36A6QL64 1941 aa17.94■□□□□ 0.46
SREBF1-213ENST00000485080 A0A1W2PR77 199 aa17.93■□□□□ 0.46
SREBF1-213ENST00000485080 HACD1B0YJ81 288 aa17.93■□□□□ 0.46
SREBF1-213ENST00000485080 CDX4O14627 284 aaPredicted RBP17.93■□□□□ 0.46
SREBF1-213ENST00000485080 RIOK3O14730 519 aaKnown RBP17.93■□□□□ 0.46
SREBF1-213ENST00000485080 SLC30A4O14863 429 aa17.93■□□□□ 0.46
SREBF1-213ENST00000485080 MTSS1O43312 755 aa17.93■□□□□ 0.46
SREBF1-213ENST00000485080 GDF9O60383 454 aa17.93■□□□□ 0.46
SREBF1-213ENST00000485080 GJB3O75712 270 aa17.93■□□□□ 0.46
SREBF1-213ENST00000485080 PYGMP11217 842 aa17.93■□□□□ 0.46
SREBF1-213ENST00000485080 PECAM1P16284 738 aaPredicted RBP17.93■□□□□ 0.46
SREBF1-213ENST00000485080 XRCC4Q13426 336 aa17.93■□□□□ 0.46
SREBF1-213ENST00000485080 TMEM52BQ4KMG9 183 aa17.93■□□□□ 0.46
SREBF1-213ENST00000485080 STPG1Q5TH74 334 aa17.93■□□□□ 0.46
SREBF1-213ENST00000485080 KAZNQ674X7 775 aa17.93■□□□□ 0.46
SREBF1-213ENST00000485080 IL27RAQ6UWB1 636 aa17.93■□□□□ 0.46
SREBF1-213ENST00000485080 ZSWIM9Q86XI8 627 aa17.93■□□□□ 0.46
SREBF1-213ENST00000485080 CNTD1Q8N815 330 aa17.93■□□□□ 0.46
SREBF1-213ENST00000485080 MFSD2AQ8NA29 543 aa17.93■□□□□ 0.46
SREBF1-213ENST00000485080 FAM174AQ8TBP5 190 aa17.93■□□□□ 0.46
SREBF1-213ENST00000485080 SERAC1Q96JX3 654 aa17.93■□□□□ 0.46
SREBF1-213ENST00000485080 LENG8Q96PV6 779 aaPredicted RBP17.93■□□□□ 0.46
SREBF1-213ENST00000485080 SEMA3CQ99985 751 aa17.93■□□□□ 0.46
SREBF1-213ENST00000485080 TMEM9BQ9NQ34 198 aa17.93■□□□□ 0.46
SREBF1-213ENST00000485080 PPP2R2CQ9Y2T4 447 aa17.93■□□□□ 0.46
SREBF1-213ENST00000485080 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.92■□□□□ 0.46
SREBF1-213ENST00000485080 KCNK1O00180 336 aa17.92■□□□□ 0.46
SREBF1-213ENST00000485080 TJP3O95049 919 aa17.92■□□□□ 0.46
SREBF1-213ENST00000485080 FTCDO95954 541 aa17.92■□□□□ 0.46
SREBF1-213ENST00000485080 JCHAINP01591 159 aa17.92■□□□□ 0.46
SREBF1-213ENST00000485080 MAXP61244 160 aa17.92■□□□□ 0.46
SREBF1-213ENST00000485080 BNC1Q01954 994 aa17.92■□□□□ 0.46
SREBF1-213ENST00000485080 AP1B1Q10567 949 aa17.92■□□□□ 0.46
SREBF1-213ENST00000485080 GRIK2Q13002 908 aa17.92■□□□□ 0.46
SREBF1-213ENST00000485080 CFAP58Q5T655 872 aa17.92■□□□□ 0.46
SREBF1-213ENST00000485080 SEL1L3Q68CR1 1132 aa17.92■□□□□ 0.46
SREBF1-213ENST00000485080 ERAP2Q6P179 960 aa17.92■□□□□ 0.46
SREBF1-213ENST00000485080 ARRDC2Q8TBH0 407 aa17.92■□□□□ 0.46
SREBF1-213ENST00000485080 TFB1MQ8WVM0 346 aaKnown RBP17.92■□□□□ 0.46
SREBF1-213ENST00000485080 SKA1Q96BD8 255 aa17.92■□□□□ 0.46
SREBF1-213ENST00000485080 SLC6A18Q96N87 628 aa17.92■□□□□ 0.46
SREBF1-213ENST00000485080 HEMGNQ9BXL5 484 aa17.92■□□□□ 0.46
SREBF1-213ENST00000485080 SLC17A9Q9BYT1 436 aa17.92■□□□□ 0.46
SREBF1-213ENST00000485080 PCDH12Q9NPG4 1184 aa17.92■□□□□ 0.46
SREBF1-213ENST00000485080 DNAAF2Q9NVR5 837 aaKnown RBP17.92■□□□□ 0.46
SREBF1-213ENST00000485080 SAE1Q9UBE0 346 aaPredicted RBP17.92■□□□□ 0.46
SREBF1-213ENST00000485080 PPIL1Q9Y3C6 166 aa17.92■□□□□ 0.46
SREBF1-213ENST00000485080 HS3ST3A1Q9Y663 406 aa17.92■□□□□ 0.46
SREBF1-213ENST00000485080 SPTBN2O15020 2390 aa17.91■□□□□ 0.46
SREBF1-213ENST00000485080 PLXNA2O75051 1894 aa17.91■□□□□ 0.46
SREBF1-213ENST00000485080 NEMP1O14524 444 aa17.91■□□□□ 0.46
SREBF1-213ENST00000485080 TM4SF5O14894 197 aa17.91■□□□□ 0.46
SREBF1-213ENST00000485080 FZD6O60353 706 aa17.91■□□□□ 0.46
SREBF1-213ENST00000485080 ZNF189O75820 626 aaPredicted RBP17.91■□□□□ 0.46
SREBF1-213ENST00000485080 PGLSO95336 258 aa17.91■□□□□ 0.46
SREBF1-213ENST00000485080 HLA-DQB2P05538 268 aa17.91■□□□□ 0.46
SREBF1-213ENST00000485080 HNRNPA2B1P22626 353 aaKnown RBP17.91■□□□□ 0.46
SREBF1-213ENST00000485080 XPAP23025 273 aaPredicted RBP17.91■□□□□ 0.46
SREBF1-213ENST00000485080 CD38P28907 300 aa17.91■□□□□ 0.46
SREBF1-213ENST00000485080 MAT2AP31153 395 aaKnown RBP17.91■□□□□ 0.46
SREBF1-213ENST00000485080 MMP12P39900 470 aa17.91■□□□□ 0.46
SREBF1-213ENST00000485080 CTSKP43235 329 aa17.91■□□□□ 0.46
SREBF1-213ENST00000485080 CSNK1EP49674 416 aaKnown RBP17.91■□□□□ 0.46
SREBF1-213ENST00000485080 TRAF2Q12933 501 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms