RNA–Protein interactions for RNA: ENST00000483881.1

PKP4-212, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-212ENST00000483881 MRPL11Q9Y3B7 192 aaKnown RBP3.24□□□□□ -1.89
PKP4-212ENST00000483881 TIMM22Q9Y584 194 aa3.24□□□□□ -1.89
PKP4-212ENST00000483881 PCDHA10Q9Y5I2 948 aa3.24□□□□□ -1.89
PKP4-212ENST00000483881 SPATA31E1Q6ZUB1 1445 aa3.24□□□□□ -1.89
PKP4-212ENST00000483881 ZNF804BA4D1E1 1349 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 GAKO14976 1311 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 HECW1Q76N89 1606 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 C17orf113A0A1B0GUU1 675 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 TMEM221A6NGB7 291 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 LINC01548A6NM66 108 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 SLC38A8A6NNN8 435 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 J3KRW8 73 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 PDLIM1O00151 329 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 HOXC11O43248 304 aaPredicted RBP3.23□□□□□ -1.89
PKP4-212ENST00000483881 TBCAO75347 108 aaKnown RBP3.23□□□□□ -1.89
PKP4-212ENST00000483881 STAMBPO95630 424 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 BAG2O95816 211 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 VCANP13611 3396 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 TRIM21P19474 475 aaKnown RBP3.23□□□□□ -1.89
PKP4-212ENST00000483881 SFPQP23246 707 aaKnown RBP eCLIP3.23□□□□□ -1.89
PKP4-212ENST00000483881 GSTM2P28161 218 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 CENPAP49450 140 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 ADPRHP54922 357 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 UBE3AQ05086 875 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.23□□□□□ -1.89
PKP4-212ENST00000483881 CCDC173Q0VFZ6 552 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 TBX2Q13207 712 aaPredicted RBP3.23□□□□□ -1.89
PKP4-212ENST00000483881 STIM1Q13586 685 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 PDE1CQ14123 709 aaPredicted RBP3.23□□□□□ -1.89
PKP4-212ENST00000483881 RABEP1Q15276 862 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 BTBD16Q32M84 506 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 KRT71Q3SY84 523 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 TUBB8Q3ZCM7 444 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 SH2D4BQ5SQS7 431 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 SPATA1Q5VX52 437 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 ISM2Q6H9L7 571 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 JMJD6Q6NYC1 403 aaPredicted RBP3.23□□□□□ -1.89
PKP4-212ENST00000483881 AADACL2Q6P093 401 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 TAOK1Q7L7X3 1001 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 DGLUCYQ7Z3D6 616 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 TTC39CQ8N584 583 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 ANKRD20A12PQ8NF67 263 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 TNIP2Q8NFZ5 429 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 PIGKQ92643 395 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 CELF1Q92879 486 aaKnown RBP3.23□□□□□ -1.89
PKP4-212ENST00000483881 CLMNQ96JQ2 1002 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 ZFYVE19Q96K21 471 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 PI4K2AQ9BTU6 479 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 TUBB6Q9BUF5 446 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 ABHD14AQ9BUJ0 271 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 VCX3BQ9H321 246 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 SYNCQ9H7C4 482 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 NRIP3Q9NQ35 241 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 IL17RBQ9NRM6 502 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 ANKEF1Q9NU02 776 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 BLOC1S4Q9NUP1 217 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 MRGBPQ9NV56 204 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 ASNSD1Q9NWL6 643 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 PDP2Q9P2J9 529 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 SLC25A13Q9UJS0 675 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 TRPC5Q9UL62 973 aaPredicted RBP3.23□□□□□ -1.89
PKP4-212ENST00000483881 COG5Q9UP83 839 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 KIAA1107Q9UPP5 1409 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 SLC8A2Q9UPR5 921 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 PCDHB2Q9Y5E7 798 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 COPG1Q9Y678 874 aaKnown RBP3.23□□□□□ -1.89
PKP4-212ENST00000483881 ZNF318Q5VUA4 2279 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 NUP155O75694 1391 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 ANKRD30AQ9BXX3 1397 aa3.23□□□□□ -1.89
PKP4-212ENST00000483881 ATP10BO94823 1461 aa3.22□□□□□ -1.89
PKP4-212ENST00000483881 AOX1Q06278 1338 aa3.22□□□□□ -1.89
PKP4-212ENST00000483881 WDR17Q8IZU2 1322 aa3.22□□□□□ -1.89
PKP4-212ENST00000483881 SYNMO15061 1565 aa3.22□□□□□ -1.89
PKP4-212ENST00000483881 TRAPPC8Q9Y2L5 1435 aa3.22□□□□□ -1.89
PKP4-212ENST00000483881 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.22□□□□□ -1.89
PKP4-212ENST00000483881 CYP2D7A0A087X1C5 515 aa3.22□□□□□ -1.89
PKP4-212ENST00000483881 UQCRHLA0A096LP55 91 aa3.22□□□□□ -1.89
PKP4-212ENST00000483881 A0A1B0GVC2 190 aa3.22□□□□□ -1.89
PKP4-212ENST00000483881 SMIM22K7EJ46 135 aa3.22□□□□□ -1.89
PKP4-212ENST00000483881 PPP6CO00743 305 aa3.22□□□□□ -1.89
PKP4-212ENST00000483881 TTI1O43156 1089 aa3.22□□□□□ -1.89
PKP4-212ENST00000483881 PRAMEF2O60811 474 aa3.22□□□□□ -1.89
PKP4-212ENST00000483881 REC8O95072 547 aa3.22□□□□□ -1.89
PKP4-212ENST00000483881 CSPG5O95196 566 aa3.22□□□□□ -1.89
PKP4-212ENST00000483881 UQCRHP07919 91 aa3.22□□□□□ -1.89
PKP4-212ENST00000483881 RPSAP08865 295 aaKnown RBP3.22□□□□□ -1.89
PKP4-212ENST00000483881 CYP2A6P11509 494 aaPredicted RBP3.22□□□□□ -1.89
PKP4-212ENST00000483881 KRT13P13646 458 aa3.22□□□□□ -1.89
PKP4-212ENST00000483881 P4HA1P13674 534 aa3.22□□□□□ -1.89
PKP4-212ENST00000483881 ALADP13716 330 aa3.22□□□□□ -1.89
PKP4-212ENST00000483881 CHN1P15882 459 aa3.22□□□□□ -1.89
PKP4-212ENST00000483881 FPR3P25089 353 aa3.22□□□□□ -1.89
PKP4-212ENST00000483881 CHRNA5P30532 468 aa3.22□□□□□ -1.89
PKP4-212ENST00000483881 PRKAR2BP31323 418 aa3.22□□□□□ -1.89
PKP4-212ENST00000483881 CSTF2P33240 577 aaKnown RBP eCLIP3.22□□□□□ -1.89
PKP4-212ENST00000483881 CTNNA1P35221 906 aaKnown RBP3.22□□□□□ -1.89
PKP4-212ENST00000483881 NR2C2P49116 596 aa3.22□□□□□ -1.89
PKP4-212ENST00000483881 PLCD1P51178 756 aa3.22□□□□□ -1.89
PKP4-212ENST00000483881 ZNF84P51523 738 aa3.22□□□□□ -1.89
PKP4-212ENST00000483881 TPD52P55327 224 aaPredicted RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms