RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 CREBBPQ92793 2442 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 ANKRD17O75179 2603 aaKnown RBP10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 STMND1H3BQB6 276 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 B4GAT1O43505 415 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 GLB1P16278 677 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 CCR10P46092 362 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 PEX5P50542 639 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 RNASE9P60153 205 aaKnown RBP10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 SRP54P61011 504 aaKnown RBP10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 APBA1Q02410 837 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 CETN1Q12798 172 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 NFATC4Q14934 902 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 WSCD2Q2TBF2 565 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 MYLK3Q32MK0 819 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 PTPN20Q4JDL3 420 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 OGFOD3Q6PK18 319 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 ZNF783Q6ZMS7 281 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 PLPP6Q8IY26 295 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 NETO2Q8NC67 525 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 RCBTB1Q8NDN9 531 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 OR2AP1Q8NGE2 309 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 CXorf40AQ8TE69 158 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 NT5C3BQ969T7 300 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 ARHGEF26Q96DR7 871 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 C1orf74Q96LT6 269 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 RBM15Q96T37 977 aaKnown RBP eCLIP10.99□□□□□ -0.657e-12■■□□□ 12.2
SMARCC1-205ENST00000483847 TBCBQ99426 244 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 C1QTNF7Q9BXJ2 289 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 LRRC4CQ9HCJ2 640 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 NDFIP2Q9NV92 336 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 RMND1Q9NWS8 449 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 LRIT1Q9P2V4 623 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 TUBD1Q9UJT1 453 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 DAAM1Q9Y4D1 1078 aa10.99□□□□□ -0.65
SMARCC1-205ENST00000483847 FAM170AA1A519 330 aa10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 B4DGG1 531 aa10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 TOR1BO14657 336 aa10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 GSRP00390 522 aa10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 FGF3P11487 239 aaPredicted RBP10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 TIMP2P16035 220 aa10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 CD44P16070 742 aaKnown RBP10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 UGT1A3P35503 534 aa10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 USP8P40818 1118 aa10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 B4GALNT1Q00973 533 aa10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 DEUP1Q05D60 604 aa10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 ARHGEF7Q14155 803 aa10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 HLTFQ14527 1009 aaKnown RBP eCLIP10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 INPP5AQ14642 412 aa10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 LRRC14Q15048 493 aa10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 AMZ1Q400G9 498 aa10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 MAP9Q49MG5 647 aa10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 C14orf28Q4W4Y0 310 aa10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 EFHC2Q5JST6 749 aa10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 TMEM164Q5U3C3 297 aa10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 GDPD4Q6W3E5 623 aa10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 IL22RA1Q8N6P7 574 aa10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 FAM46DQ8NEK8 389 aa10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 ZNF397Q8NF99 534 aaPredicted RBP10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 C9orf43Q8TAL5 461 aaPredicted RBP10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 OR1E3Q8WZA6 343 aa10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 ARHGEF2Q92974 986 aaKnown RBP10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 FUBP1Q96AE4 644 aaKnown RBP10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 CEP63Q96MT8 703 aa10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 APOOQ9BUR5 198 aa10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 ZYG11BQ9C0D3 744 aa10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 B3GNT4Q9C0J1 378 aa10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 MRPL40Q9NQ50 206 aaKnown RBP10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 PLCB1Q9NQ66 1216 aa10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 KLQ9UEF7 1012 aa10.98□□□□□ -0.65
SMARCC1-205ENST00000483847 TMEM202A6NGA9 273 aa10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 TMEM110-MUSTN1A8MSY1 372 aa10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 NKX2-8O15522 239 aa10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 MTSS1O43312 755 aa10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 DUX1O43812 170 aa10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 POP4O95707 220 aaKnown RBP10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 CPNE6O95741 557 aa10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 PNLIPP16233 465 aa10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 HTR1BP28222 390 aa10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 ATP1A2P50993 1020 aa10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 OR1D5P58170 312 aa10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 ARHGAP44Q17R89 818 aa10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 ISM2Q6H9L7 571 aa10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 TRNP1Q6NT89 227 aa10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 FOXR2Q6PJQ5 311 aa10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 TAF8Q7Z7C8 310 aa10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 TRIM59Q8IWR1 403 aa10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 PLA2G15Q8NCC3 412 aa10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 CCL4L1Q8NHW4 92 aa10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 MIB2Q96AX9 1013 aa10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 PGAP3Q96FM1 320 aaPredicted RBP10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 WDR92Q96MX6 357 aa10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 NUDT22Q9BRQ3 303 aa10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 OSBPL1AQ9BXW6 950 aa10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 TMEM168Q9H0V1 697 aa10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 SYNCQ9H7C4 482 aa10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 FGF22Q9HCT0 170 aa10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 KCNK4Q9NYG8 393 aa10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 RRN3Q9NYV6 651 aa10.97□□□□□ -0.65
SMARCC1-205ENST00000483847 PLEKHB1Q9UF11 243 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms