RNA–Protein interactions for RNA: ENST00000483768.1

ZNF561-216, Transcript of zinc finger protein 561, humanhuman

TSL 1 (best)

Gene ZNF561, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-216ENST00000483768 SMPD2O60906 423 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 TADA2AO75478 443 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 OLFM2O95897 454 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 INHBAP08476 426 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 SUPT20HL2P0C7V6 817 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 CYP2A6P11509 494 aaPredicted RBP3.38□□□□□ -1.87
ZNF561-216ENST00000483768 KRT13P13646 458 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 PTPN2P17706 415 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 GABRB1P18505 474 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 LAG3P18627 525 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 HK1P19367 917 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 DRD1P21728 446 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 CD72P21854 359 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 SLC6A2P23975 617 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 MC5RP33032 325 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 PBX1P40424 430 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 ETV4P43268 484 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 KIR2DL3P43628 341 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 GSTM5P46439 218 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 PIP4K2AP48426 406 aaPredicted RBP3.38□□□□□ -1.87
ZNF561-216ENST00000483768 TOB1P50616 345 aaPredicted RBP3.38□□□□□ -1.87
ZNF561-216ENST00000483768 PGDP52209 483 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 STAT2P52630 851 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 ZNF134P52741 427 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 CSE1LP55060 971 aaKnown RBP3.38□□□□□ -1.87
ZNF561-216ENST00000483768 MFAP4P55083 255 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 PRAMEP78395 509 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 PTH1RQ03431 593 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 AIMP2Q13155 320 aaKnown RBP3.38□□□□□ -1.87
ZNF561-216ENST00000483768 THOC5Q13769 683 aaKnown RBP3.38□□□□□ -1.87
ZNF561-216ENST00000483768 SF3B3Q15393 1217 aaKnown RBP3.38□□□□□ -1.87
ZNF561-216ENST00000483768 LSM12Q3MHD2 195 aaKnown RBP3.38□□□□□ -1.87
ZNF561-216ENST00000483768 TBRG1Q3YBR2 411 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 SUPT20HL1Q3ZLR7 823 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 RUNDC3AQ59EK9 446 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 ZNF667Q5HYK9 610 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 FAM47AQ5JRC9 791 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 MIIPQ5JXC2 388 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 TBC1D9BQ66K14 1250 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 MTHFD1LQ6UB35 978 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 KDELC1Q6UW63 502 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 LAYNQ6UX15 382 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 MAMDC4Q6UXC1 1216 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 SERPINA13PQ6UXR4 307 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 CXXC5Q7LFL8 322 aaKnown RBP3.38□□□□□ -1.87
ZNF561-216ENST00000483768 POLNQ7Z5Q5 900 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 PPP1R32Q7Z5V6 425 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 ZER1Q7Z7L7 766 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 C1orf210Q8IVY1 113 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 SIX6OS1Q8N1H7 587 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 DPP10Q8N608 796 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 PTGR2Q8N8N7 351 aaPredicted RBP3.38□□□□□ -1.87
ZNF561-216ENST00000483768 PLA2G15Q8NCC3 412 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 NSUN7Q8NE18 718 aaKnown RBP3.38□□□□□ -1.87
ZNF561-216ENST00000483768 ANKRD20A12PQ8NF67 263 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 NLGN4YQ8NFZ3 816 aaPredicted RBP3.38□□□□□ -1.87
ZNF561-216ENST00000483768 TNIP2Q8NFZ5 429 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 CADM4Q8NFZ8 388 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 OR5M3Q8NGP4 307 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 MBD3L2Q8NHZ7 208 aaPredicted RBP3.38□□□□□ -1.87
ZNF561-216ENST00000483768 SPATA20Q8TB22 786 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 TBC1D15Q8TC07 691 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 SPATA18Q8TC71 538 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 DUSP19Q8WTR2 217 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 CLEC4CQ8WTT0 213 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 EDAQ92838 391 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 ZKSCAN4Q969J2 545 aaPredicted RBP3.38□□□□□ -1.87
ZNF561-216ENST00000483768 FAM162AQ96A26 154 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 MIEF2Q96C03 454 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 ZNF503Q96F45 646 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 FAM89AQ96GI7 184 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 COG3Q96JB2 828 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 MOGAT1Q96PD6 335 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 PLEKHG4BQ96PX9 1271 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 PAFAH2Q99487 392 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 EIF3CQ99613 913 aaKnown RBP3.38□□□□□ -1.87
ZNF561-216ENST00000483768 CLSTN3Q9BQT9 956 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 NUDT22Q9BRQ3 303 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 TUBB6Q9BUF5 446 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 CCDC106Q9BWC9 280 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 TRIM6Q9C030 488 aaPredicted RBP3.38□□□□□ -1.87
ZNF561-216ENST00000483768 KRT23Q9C075 422 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 SIK2Q9H0K1 926 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 C1orf21Q9H246 121 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 SYNPO2LQ9H987 977 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 MPP6Q9NZW5 540 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 HCN3Q9P1Z3 774 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 HOOK1Q9UJC3 728 aaKnown RBP3.38□□□□□ -1.87
ZNF561-216ENST00000483768 PADI1Q9ULC6 663 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 FAM184BQ9ULE4 1060 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 SHOC2Q9UQ13 582 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 DICER1Q9UPY3 1922 aaKnown RBP3.38□□□□□ -1.87
ZNF561-216ENST00000483768 SPTBN5Q9NRC6 3674 aaKnown RBP3.38□□□□□ -1.87
ZNF561-216ENST00000483768 EDC4Q6P2E9 1401 aaKnown RBP3.37□□□□□ -1.87
ZNF561-216ENST00000483768 NRXN2Q9P2S2 1712 aa3.37□□□□□ -1.87
ZNF561-216ENST00000483768 TBC1D3DA0A087WVF3 549 aa3.37□□□□□ -1.87
ZNF561-216ENST00000483768 TBC1D3IA0A087WXS9 549 aa3.37□□□□□ -1.87
ZNF561-216ENST00000483768 TBC1D3EA0A087X179 549 aa3.37□□□□□ -1.87
ZNF561-216ENST00000483768 TBC1D3KA0A087X1G2 549 aa3.37□□□□□ -1.87
ZNF561-216ENST00000483768 LOC105369274A0A096LPK9 316 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms