RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 SDHBP21912 280 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 CTNNA2P26232 953 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 C21orf59P57076 290 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 RPS21P63220 83 aaKnown RBP13.52□□□□□ -0.25
SSR1-208ENST00000483409 CCZ1BP86790 482 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 CCZ1P86791 482 aaPredicted RBP13.52□□□□□ -0.25
SSR1-208ENST00000483409 SEMG2Q02383 582 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 ADCY2Q08462 1091 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 PPIDQ08752 370 aaKnown RBP13.52□□□□□ -0.25
SSR1-208ENST00000483409 ITKQ08881 620 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 AP1B1Q10567 949 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 HNRNPDQ14103 355 aaKnown RBP13.52□□□□□ -0.25
SSR1-208ENST00000483409 TFDP2Q14188 446 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 KIF19Q2TAC6 998 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 TMEM259Q4ZIN3 620 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 FAM182AQ5T1J6 154 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 NAPEPLDQ6IQ20 393 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 KIAA1161Q6NSJ0 714 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 BRAT1Q6PJG6 821 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 B4GALNT4Q76KP1 1039 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 NT5DC3Q86UY8 548 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 CCDC13Q8IYE1 715 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 HAUS1Q96CS2 278 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 FEM1CQ96JP0 617 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 OLFM3Q96PB7 478 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 NUDCD1Q96RS6 583 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 SEMA3CQ99985 751 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 WRAP53Q9BUR4 548 aaKnown RBP13.52□□□□□ -0.25
SSR1-208ENST00000483409 NOD2Q9HC29 1040 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 PCDH12Q9NPG4 1184 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 RBM22Q9NW64 420 aaKnown RBP eCLIP13.52□□□□□ -0.25
SSR1-208ENST00000483409 SAE1Q9UBE0 346 aaPredicted RBP13.52□□□□□ -0.25
SSR1-208ENST00000483409 DMTF1Q9Y222 760 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 ANKRD6Q9Y2G4 727 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 PCDHA3Q9Y5H8 950 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 SNX11Q9Y5W9 270 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 CAPN6Q9Y6Q1 641 aa13.52□□□□□ -0.25
SSR1-208ENST00000483409 DCDC2BA2VCK2 349 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 PRAMEF26H0Y7S4 382 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 KCNK1O00180 336 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 TRAFD1O14545 582 aaPredicted RBP13.51□□□□□ -0.25
SSR1-208ENST00000483409 PPP1R12AO14974 1030 aaPredicted RBP13.51□□□□□ -0.25
SSR1-208ENST00000483409 TSPAN6O43657 245 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 FTCDO95954 541 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 JCHAINP01591 159 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 HLA-DQB2P05538 268 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 CCNB1P14635 433 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 PECAM1P16284 738 aaPredicted RBP13.51□□□□□ -0.25
SSR1-208ENST00000483409 CD38P28907 300 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 NUDT1P36639 197 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 FGL2Q14314 439 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 PUM1Q14671 1186 aaKnown RBP eCLIP13.51□□□□□ -0.252e-9■■□□□ 14.3
SSR1-208ENST00000483409 PDK1Q15118 436 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 UGP2Q16851 508 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 PEX26Q7Z412 305 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 SYCE1Q8N0S2 351 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 HCAR2Q8TDS4 363 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 CXorf40AQ8TE69 158 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 PDCD6IPQ8WUM4 868 aaKnown RBP13.51□□□□□ -0.25
SSR1-208ENST00000483409 ALG3Q92685 438 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 FATE1Q969F0 183 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 ECHDC3Q96DC8 303 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 RTKNQ9BST9 563 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 HEMGNQ9BXL5 484 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 CEP41Q9BYV8 373 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 TSGA10Q9BZW7 698 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 ZDHHC5Q9C0B5 715 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 POLR1EQ9GZS1 481 aaKnown RBP13.51□□□□□ -0.25
SSR1-208ENST00000483409 IL21RQ9HBE5 538 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 SEPT10Q9P0V9 454 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 AMFRQ9UKV5 643 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 GUCA1BQ9UMX6 200 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 PACSIN2Q9UNF0 486 aaPredicted RBP13.51□□□□□ -0.25
SSR1-208ENST00000483409 PCDHGC4Q9Y5F7 938 aa13.51□□□□□ -0.25
SSR1-208ENST00000483409 CNOT1A5YKK6 2376 aaKnown RBP13.5□□□□□ -0.25
SSR1-208ENST00000483409 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.5□□□□□ -0.25
SSR1-208ENST00000483409 A0A1W2PR77 199 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 CCDC66A2RUB6 948 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 KCNK3O14649 394 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 VILLO15195 856 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 NRDCO43847 1150 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 MMP20O60882 483 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 OPHN1O60890 802 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 SOCS5O75159 536 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 CER1O95813 267 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 PAK4O96013 591 aaPredicted RBP13.5□□□□□ -0.25
SSR1-208ENST00000483409 TGM2P21980 687 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 KCNA4P22459 653 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 HNRNPA2B1P22626 353 aaKnown RBP13.5□□□□□ -0.25
SSR1-208ENST00000483409 AKT2P31751 481 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 PEX5P50542 639 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 RWDD2BP57060 319 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 CLDN2P57739 230 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 DSC2Q02487 901 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 ELP6Q0PNE2 266 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 TRAF2Q12933 501 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 ZBTB17Q13105 803 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 SGCGQ13326 291 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 STAT4Q14765 748 aa13.5□□□□□ -0.25
SSR1-208ENST00000483409 PPP2R5EQ16537 467 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms