RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 LDOC1O95751 146 aaPredicted RBP14.01□□□□□ -0.17
VARS-225ENST00000482996 CD48P09326 243 aa14.01□□□□□ -0.17
VARS-225ENST00000482996 ATXN1LP0C7T5 689 aaKnown RBP14.01□□□□□ -0.17
VARS-225ENST00000482996 ARHGAP25P42331 645 aa14.01□□□□□ -0.17
VARS-225ENST00000482996 RGRP47804 291 aa14.01□□□□□ -0.17
VARS-225ENST00000482996 SCNN1BP51168 640 aa14.01□□□□□ -0.17
VARS-225ENST00000482996 POLR2LP62875 67 aaKnown RBP14.01□□□□□ -0.17
VARS-225ENST00000482996 SLC10A7Q0GE19 358 aa14.01□□□□□ -0.17
VARS-225ENST00000482996 MMRN1Q13201 1228 aa14.01□□□□□ -0.17
VARS-225ENST00000482996 DPYSL3Q14195 570 aa14.01□□□□□ -0.17
VARS-225ENST00000482996 TMEM52BQ4KMG9 183 aa14.01□□□□□ -0.17
VARS-225ENST00000482996 SLCO6A1Q86UG4 719 aa14.01□□□□□ -0.17
VARS-225ENST00000482996 EID2Q8N6I1 236 aa14.01□□□□□ -0.17
VARS-225ENST00000482996 PNPLA1Q8N8W4 532 aa14.01□□□□□ -0.17
VARS-225ENST00000482996 SLC35G2Q8TBE7 412 aa14.01□□□□□ -0.17
VARS-225ENST00000482996 RFFLQ8WZ73 363 aa14.01□□□□□ -0.17
VARS-225ENST00000482996 IFT43Q96FT9 208 aa14.01□□□□□ -0.17
VARS-225ENST00000482996 CNDP2Q96KP4 475 aaKnown RBP14.01□□□□□ -0.17
VARS-225ENST00000482996 BMFQ96LC9 184 aa14.01□□□□□ -0.17
VARS-225ENST00000482996 WRAP53Q9BUR4 548 aaKnown RBP14.01□□□□□ -0.17
VARS-225ENST00000482996 PCDH12Q9NPG4 1184 aa14.01□□□□□ -0.17
VARS-225ENST00000482996 INTUQ9ULD6 942 aa14.01□□□□□ -0.17
VARS-225ENST00000482996 ENC1O14682 589 aa14□□□□□ -0.17
VARS-225ENST00000482996 MAFKO60675 156 aa14□□□□□ -0.17
VARS-225ENST00000482996 SDC3O75056 442 aa14□□□□□ -0.17
VARS-225ENST00000482996 ITIH2P19823 946 aa14□□□□□ -0.17
VARS-225ENST00000482996 IL4RP24394 825 aa14□□□□□ -0.17
VARS-225ENST00000482996 ARSEP51690 589 aa14□□□□□ -0.17
VARS-225ENST00000482996 TAS2R40P59535 323 aa14□□□□□ -0.17
VARS-225ENST00000482996 GSE1Q14687 1217 aa14□□□□□ -0.17
VARS-225ENST00000482996 ATP13A4Q4VNC1 1196 aa14□□□□□ -0.17
VARS-225ENST00000482996 HS1BP3Q53T59 392 aa14□□□□□ -0.17
VARS-225ENST00000482996 ANKRD20A8PQ5CZ79 823 aa14□□□□□ -0.17
VARS-225ENST00000482996 MARC1Q5VT66 337 aa14□□□□□ -0.17
VARS-225ENST00000482996 CPNE8Q86YQ8 564 aa14□□□□□ -0.17
VARS-225ENST00000482996 KLF6Q99612 283 aaPredicted RBP14□□□□□ -0.17
VARS-225ENST00000482996 DNAJC28Q9NX36 388 aa14□□□□□ -0.17
VARS-225ENST00000482996 KLK13Q9UKR3 277 aa14□□□□□ -0.17
VARS-225ENST00000482996 ATP8A1Q9Y2Q0 1164 aa14□□□□□ -0.17
VARS-225ENST00000482996 MSRB2Q9Y3D2 182 aa14□□□□□ -0.17
VARS-225ENST00000482996 IGF2RP11717 2491 aa14□□□□□ -0.17
VARS-225ENST00000482996 A0A1W2PQ67 120 aa13.99□□□□□ -0.17
VARS-225ENST00000482996 GOLGA6L3A6NEY3 463 aa13.99□□□□□ -0.17
VARS-225ENST00000482996 H3BM21 787 aa13.99□□□□□ -0.17
VARS-225ENST00000482996 RIOK3O14730 519 aaKnown RBP13.99□□□□□ -0.17
VARS-225ENST00000482996 MUSKO15146 869 aa13.99□□□□□ -0.17
VARS-225ENST00000482996 MFSD11O43934 449 aa13.99□□□□□ -0.17
VARS-225ENST00000482996 MTA2O94776 668 aa13.99□□□□□ -0.17
VARS-225ENST00000482996 PEX11BO96011 259 aa13.99□□□□□ -0.17
VARS-225ENST00000482996 NFKBIAP25963 317 aa13.99□□□□□ -0.17
VARS-225ENST00000482996 MMP12P39900 470 aa13.99□□□□□ -0.17
VARS-225ENST00000482996 MMP13P45452 471 aa13.99□□□□□ -0.17
VARS-225ENST00000482996 THOP1P52888 689 aa13.99□□□□□ -0.17
VARS-225ENST00000482996 HNRNPKP61978 463 aaKnown RBP eCLIP13.99□□□□□ -0.17
VARS-225ENST00000482996 PDE1CQ14123 709 aaPredicted RBP13.99□□□□□ -0.17
VARS-225ENST00000482996 PTK2BQ14289 1009 aa13.99□□□□□ -0.17
VARS-225ENST00000482996 PAFAH1B3Q15102 231 aaKnown RBP13.99□□□□□ -0.17
VARS-225ENST00000482996 CCDC157Q569K6 752 aa13.99□□□□□ -0.17
VARS-225ENST00000482996 RALGPS1Q5JS13 557 aa13.99□□□□□ -0.17
VARS-225ENST00000482996 KANSL1Q7Z3B3 1105 aa13.99□□□□□ -0.17
VARS-225ENST00000482996 PARGQ86W56 976 aa13.99□□□□□ -0.17
VARS-225ENST00000482996 SLC22A18ASQ8N1D0 253 aa13.99□□□□□ -0.17
VARS-225ENST00000482996 PCDH19Q8TAB3 1148 aa13.99□□□□□ -0.17
VARS-225ENST00000482996 CENPTQ96BT3 561 aa13.99□□□□□ -0.17
VARS-225ENST00000482996 NUDCD1Q96RS6 583 aa13.99□□□□□ -0.17
VARS-225ENST00000482996 SCUBE2Q9NQ36 999 aa13.99□□□□□ -0.17
VARS-225ENST00000482996 GPR27Q9NS67 375 aa13.99□□□□□ -0.17
VARS-225ENST00000482996 HAUS2Q9NVX0 235 aa13.99□□□□□ -0.17
VARS-225ENST00000482996 TOR4AQ9NXH8 423 aa13.99□□□□□ -0.17
VARS-225ENST00000482996 CACNA1BQ00975 2339 aa13.99□□□□□ -0.17
VARS-225ENST00000482996 ARID1BQ8NFD5 2236 aaPredicted RBP13.98□□□□□ -0.17
VARS-225ENST00000482996 FRYQ5TBA9 3013 aa13.98□□□□□ -0.17
VARS-225ENST00000482996 SPTY2D1-AS1A0A0U1RR47 76 aa13.98□□□□□ -0.17
VARS-225ENST00000482996 CFAP69A5D8W1 941 aa13.98□□□□□ -0.17
VARS-225ENST00000482996 TOR1BO14657 336 aa13.98□□□□□ -0.17
VARS-225ENST00000482996 LZTS3O60299 673 aaPredicted RBP13.98□□□□□ -0.17
VARS-225ENST00000482996 SOCS5O75159 536 aa13.98□□□□□ -0.17
VARS-225ENST00000482996 PIAS2O75928 621 aa13.98□□□□□ -0.17
VARS-225ENST00000482996 DKK1O94907 266 aa13.98□□□□□ -0.17
VARS-225ENST00000482996 ALPPL2P10696 532 aa13.98□□□□□ -0.17
VARS-225ENST00000482996 CDK4P11802 303 aa13.98□□□□□ -0.17
VARS-225ENST00000482996 C6P13671 934 aa13.98□□□□□ -0.17
VARS-225ENST00000482996 MX2P20592 715 aa13.98□□□□□ -0.17
VARS-225ENST00000482996 DGKAP23743 735 aa13.98□□□□□ -0.17
VARS-225ENST00000482996 GARSP41250 739 aaKnown RBP13.98□□□□□ -0.17
VARS-225ENST00000482996 LIG3P49916 1009 aa13.98□□□□□ -0.17
VARS-225ENST00000482996 PFN3P60673 137 aa13.98□□□□□ -0.17
VARS-225ENST00000482996 YPEL5P62699 121 aa13.98□□□□□ -0.17
VARS-225ENST00000482996 GALNT2Q10471 571 aa13.98□□□□□ -0.17
VARS-225ENST00000482996 FZD2Q14332 565 aa13.98□□□□□ -0.17
VARS-225ENST00000482996 LRRC14Q15048 493 aa13.98□□□□□ -0.17
VARS-225ENST00000482996 IFI16Q16666 785 aaKnown RBP13.98□□□□□ -0.17
VARS-225ENST00000482996 ODF2Q5BJF6 829 aa13.98□□□□□ -0.17
VARS-225ENST00000482996 NCBP2-AS2Q69YL0 99 aa13.98□□□□□ -0.17
VARS-225ENST00000482996 TIGD7Q6NT04 549 aaPredicted RBP13.98□□□□□ -0.17
VARS-225ENST00000482996 UNQ6494/PRO21346Q6UXR6 183 aa13.98□□□□□ -0.17
VARS-225ENST00000482996 ZSWIM9Q86XI8 627 aa13.98□□□□□ -0.17
VARS-225ENST00000482996 TC2NQ8N9U0 490 aa13.98□□□□□ -0.17
VARS-225ENST00000482996 FAF2Q96CS3 445 aa13.98□□□□□ -0.17
VARS-225ENST00000482996 ECHDC3Q96DC8 303 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms