RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 PNLIPP16233 465 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 GCFC2P16383 781 aaKnown RBP6.59□□□□□ -1.35
CHD6-209ENST00000482596 EPB42P16452 691 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 ALDH4A1P30038 563 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 HOXC12P31275 282 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 CASP14P31944 242 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 CSF2RBP32927 897 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 PNPLA4P41247 253 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 STK19P49842 368 aaPredicted RBP6.59□□□□□ -1.35
CHD6-209ENST00000482596 MC2RQ01718 297 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 DNM1Q05193 864 aaKnown RBP6.59□□□□□ -1.35
CHD6-209ENST00000482596 IL10RAQ13651 578 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 ELAVL3Q14576 367 aaKnown RBP6.59□□□□□ -1.35
CHD6-209ENST00000482596 LLGL1Q15334 1064 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 MPPE1Q53F39 396 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 ARSHQ5FYA8 562 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 NKAIN2Q5VXU1 208 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 PODNL1Q6PEZ8 512 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 CEACAM20Q6UY09 585 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 KRBA2Q6ZNG9 492 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 MMS22LQ6ZRQ5 1243 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 LIMS2Q7Z4I7 341 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 FAM217AQ8IXS0 508 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 C1orf127Q8N9H9 656 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 TMEM161BQ8NDZ6 487 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 CXorf38Q8TB03 319 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 FAR1Q8WVX9 515 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 BICD1Q96G01 975 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 COX4I2Q96KJ9 171 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 LMLNQ96KR4 655 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 RPL10LQ96L21 214 aaKnown RBP6.59□□□□□ -1.35
CHD6-209ENST00000482596 TBATAQ96M53 351 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 GSX2Q9BZM3 304 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 ELOVL4Q9GZR5 314 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 BHMT2Q9H2M3 363 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 ACTL8Q9H568 366 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 TLR8Q9NR97 1041 aaKnown RBP6.59□□□□□ -1.35
CHD6-209ENST00000482596 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.59□□□□□ -1.352e-8■□□□□ 10.2
CHD6-209ENST00000482596 GPR83Q9NYM4 423 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 ORC3Q9UBD5 711 aaPredicted RBP6.59□□□□□ -1.35
CHD6-209ENST00000482596 TRPS1Q9UHF7 1281 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 NAP1L2Q9ULW6 460 aaPredicted RBP6.59□□□□□ -1.35
CHD6-209ENST00000482596 BTRCQ9Y297 605 aa6.59□□□□□ -1.35
CHD6-209ENST00000482596 INTS1Q8N201 2190 aaKnown RBP6.59□□□□□ -1.35
CHD6-209ENST00000482596 TENM1Q9UKZ4 2725 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 A0A1W2PQH9 124 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 PP2D1A8MPX8 630 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 RNF103O00237 685 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 JRKO75564 520 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 PCDH8O95206 1070 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 CD1CP29017 333 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 CDC25AP30304 524 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 ADH7P40394 386 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 TXKP42681 527 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 IDH3AP50213 366 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 PFN3P60673 137 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 TRA2AQ13595 282 aaKnown RBP eCLIP6.58□□□□□ -1.362e-7■■□□□ 14.1
CHD6-209ENST00000482596 DNASE1L3Q13609 305 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 MAP7Q14244 749 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 HLTFQ14527 1009 aaKnown RBP eCLIP6.58□□□□□ -1.36
CHD6-209ENST00000482596 UGT8Q16880 541 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 EARS2Q5JPH6 523 aaKnown RBP6.58□□□□□ -1.36
CHD6-209ENST00000482596 ZFYVE27Q5T4F4 411 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 SLC39A4Q6P5W5 647 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 LVRNQ6Q4G3 990 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 GPRIN1Q7Z2K8 1008 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 ZMIZ2Q8NF64 920 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 THAP4Q8WY91 577 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 TRAPPC9Q96Q05 1148 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 KLF6Q99612 283 aaPredicted RBP6.58□□□□□ -1.36
CHD6-209ENST00000482596 MSTO1Q9BUK6 570 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 SLC26A6Q9BXS9 759 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 SLC17A9Q9BYT1 436 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 SPRTNQ9H040 489 aaPredicted RBP6.58□□□□□ -1.36
CHD6-209ENST00000482596 ASB7Q9H672 318 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 TUFT1Q9NNX1 390 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 PDE7BQ9NP56 450 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 RASAL2Q9UJF2 1139 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 PCDHGA6Q9Y5G7 932 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 CSAG2Q9Y5P2 127 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 HCFC1P51610 2035 aa6.58□□□□□ -1.36
CHD6-209ENST00000482596 EPPK1P58107 5090 aaKnown RBP6.58□□□□□ -1.36
CHD6-209ENST00000482596 A0A0U1RQS6 177 aa6.57□□□□□ -1.36
CHD6-209ENST00000482596 A8MU76 341 aa6.57□□□□□ -1.36
CHD6-209ENST00000482596 H7C1Q1 480 aa6.57□□□□□ -1.36
CHD6-209ENST00000482596 MSTNO14793 375 aa6.57□□□□□ -1.36
CHD6-209ENST00000482596 SMAD7O15105 426 aaKnown RBP6.57□□□□□ -1.36
CHD6-209ENST00000482596 BEST1O76090 585 aa6.57□□□□□ -1.36
CHD6-209ENST00000482596 DNASE1P24855 282 aa6.57□□□□□ -1.36
CHD6-209ENST00000482596 ERCC5P28715 1186 aaPredicted RBP6.57□□□□□ -1.36
CHD6-209ENST00000482596 SPAM1P38567 509 aa6.57□□□□□ -1.36
CHD6-209ENST00000482596 DGKQP52824 942 aa6.57□□□□□ -1.36
CHD6-209ENST00000482596 TFAMQ00059 246 aaKnown RBP6.57□□□□□ -1.36
CHD6-209ENST00000482596 ELOCQ15369 112 aa6.57□□□□□ -1.36
CHD6-209ENST00000482596 OCLNQ16625 522 aa6.57□□□□□ -1.36
CHD6-209ENST00000482596 KYAT1Q16773 422 aa6.57□□□□□ -1.36
CHD6-209ENST00000482596 LONRF1Q17RB8 773 aa6.57□□□□□ -1.36
CHD6-209ENST00000482596 KCTD16Q68DU8 428 aa6.57□□□□□ -1.36
CHD6-209ENST00000482596 NEK5Q6P3R8 708 aa6.57□□□□□ -1.36
CHD6-209ENST00000482596 KLHDC10Q6PID8 442 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms