RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 EIF2B5Q13144 721 aaKnown RBP10.57□□□□□ -0.72
CPSF4-212ENST00000482251 TARDBPQ13148 414 aaKnown RBP eCLIP10.57□□□□□ -0.72
CPSF4-212ENST00000482251 CAMK2BQ13554 666 aa10.57□□□□□ -0.72
CPSF4-212ENST00000482251 DPYSL2Q16555 572 aa10.57□□□□□ -0.72
CPSF4-212ENST00000482251 DEFB133Q30KQ1 61 aa10.57□□□□□ -0.72
CPSF4-212ENST00000482251 AFMIDQ63HM1 303 aa10.57□□□□□ -0.72
CPSF4-212ENST00000482251 C19orf48Q6RUI8 117 aa10.57□□□□□ -0.72
CPSF4-212ENST00000482251 NYAP1Q6ZVC0 841 aa10.57□□□□□ -0.72
CPSF4-212ENST00000482251 TP53I13Q8NBR0 393 aaPredicted RBP10.57□□□□□ -0.72
CPSF4-212ENST00000482251 DENND6BQ8NEG7 585 aa10.57□□□□□ -0.72
CPSF4-212ENST00000482251 LMX1AQ8TE12 382 aa10.57□□□□□ -0.72
CPSF4-212ENST00000482251 CENPTQ96BT3 561 aa10.57□□□□□ -0.72
CPSF4-212ENST00000482251 APOLD1Q96LR9 279 aa10.57□□□□□ -0.72
CPSF4-212ENST00000482251 CSPG4P5Q96PW8 444 aa10.57□□□□□ -0.72
CPSF4-212ENST00000482251 EIF3CQ99613 913 aaKnown RBP10.57□□□□□ -0.72
CPSF4-212ENST00000482251 XPO4Q9C0E2 1151 aaKnown RBP10.57□□□□□ -0.72
CPSF4-212ENST00000482251 SUV39H2Q9H5I1 410 aa10.57□□□□□ -0.72
CPSF4-212ENST00000482251 DONSONQ9NYP3 566 aa10.57□□□□□ -0.72
CPSF4-212ENST00000482251 DKK3Q9UBP4 350 aa10.57□□□□□ -0.72
CPSF4-212ENST00000482251 PNMA8BQ9ULN7 279 aaPredicted RBP10.57□□□□□ -0.72
CPSF4-212ENST00000482251 CAPN11Q9UMQ6 739 aa10.57□□□□□ -0.72
CPSF4-212ENST00000482251 LUC7L2Q9Y383 392 aaKnown RBP10.57□□□□□ -0.72
CPSF4-212ENST00000482251 PKD1L2Q7Z442 2459 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 TSPAN11A1L157 253 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 A8MX80 341 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 K7ESM1 405 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 AQP9O43315 295 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 CSF2P04141 144 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 CELA2BP08218 269 aaPredicted RBP10.56□□□□□ -0.72
CPSF4-212ENST00000482251 ALPPL2P10696 532 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 ACP1P24666 158 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 SERPINA4P29622 427 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 PCK1P35558 622 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 MMP12P39900 470 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 SCNN1BP51168 640 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 INSM1Q01101 510 aaPredicted RBP10.56□□□□□ -0.72
CPSF4-212ENST00000482251 SLC25A11Q02978 314 aaKnown RBP10.56□□□□□ -0.72
CPSF4-212ENST00000482251 SLC10A7Q0GE19 358 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 ELP6Q0PNE2 266 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 MMRN1Q13201 1228 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 ZNF211Q13398 564 aaPredicted RBP10.56□□□□□ -0.72
CPSF4-212ENST00000482251 C1orf61Q13536 156 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 KRT81Q14533 505 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 ZNF235Q14590 738 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 UGP2Q16851 508 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 PRRT3Q5FWE3 981 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 CCDC122Q5T0U0 273 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 TMCO4Q5TGY1 634 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 ERAP2Q6P179 960 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 ALKBH5Q6P6C2 394 aaKnown RBP10.56□□□□□ -0.72
CPSF4-212ENST00000482251 CRTC1Q6UUV9 634 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 TMCO3Q6UWJ1 677 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 POLNQ7Z5Q5 900 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 SRLQ86TD4 932 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 ZSCAN30Q86W11 494 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 TMPRSS12Q86WS5 348 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 PHACTR4Q8IZ21 702 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 ATPAF2Q8N5M1 289 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 ZNF564Q8TBZ8 553 aaPredicted RBP10.56□□□□□ -0.72
CPSF4-212ENST00000482251 SYN2Q92777 582 aaPredicted RBP10.56□□□□□ -0.72
CPSF4-212ENST00000482251 NSMCE3Q96MG7 304 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 DCBLD2Q96PD2 775 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 LENG8Q96PV6 779 aaPredicted RBP10.56□□□□□ -0.72
CPSF4-212ENST00000482251 C1QTNF7Q9BXJ2 289 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 PACSIN1Q9BY11 444 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 CPEB1Q9BZB8 566 aaKnown RBP10.56□□□□□ -0.72
CPSF4-212ENST00000482251 ATP13A3Q9H7F0 1226 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 PCDH18Q9HCL0 1135 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 NLGN3Q9NZ94 848 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 APOBEC3BQ9UH17 382 aaKnown RBP10.56□□□□□ -0.72
CPSF4-212ENST00000482251 ATP8A1Q9Y2Q0 1164 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 OR1A2Q9Y585 309 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 BZW2Q9Y6E2 419 aaKnown RBP10.56□□□□□ -0.72
CPSF4-212ENST00000482251 MYLKQ15746 1914 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 SHROOM3Q8TF72 1996 aa10.56□□□□□ -0.72
CPSF4-212ENST00000482251 LY6G6EA0A0G2JKS1 128 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 RIOK3O14730 519 aaKnown RBP10.55□□□□□ -0.72
CPSF4-212ENST00000482251 MFSD11O43934 449 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 LZTS3O60299 673 aaPredicted RBP10.55□□□□□ -0.72
CPSF4-212ENST00000482251 MAP3K6O95382 1288 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 CYP1A2P05177 515 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 CD48P09326 243 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 C1SP09871 688 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 EIF4A3P38919 411 aaKnown RBP10.55□□□□□ -0.72
CPSF4-212ENST00000482251 LIG3P49916 1009 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 CDH6P55285 790 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 MAXP61244 160 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 BCL2L1Q07817 233 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 IL10RBQ08334 325 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 RALGDSQ12967 914 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 PIGHQ14442 188 aaPredicted RBP10.55□□□□□ -0.72
CPSF4-212ENST00000482251 LBRQ14739 615 aaKnown RBP10.55□□□□□ -0.72
CPSF4-212ENST00000482251 LRRC14Q15048 493 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 CDKN3Q16667 212 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 WSCD2Q2TBF2 565 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 TMEM52BQ4KMG9 183 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 BRAT1Q6PJG6 821 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 MACC1Q6ZN28 852 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 RD3Q7Z3Z2 195 aa10.55□□□□□ -0.72
CPSF4-212ENST00000482251 DCP2Q8IU60 420 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms