RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 BAHD1Q8TBE0 780 aaPredicted RBP18.9■□□□□ 0.62
HSPG2-210ENST00000481644 ASB12Q8WXK4 309 aa18.9■□□□□ 0.62
HSPG2-210ENST00000481644 RAPGEF5Q92565 580 aa18.9■□□□□ 0.62
HSPG2-210ENST00000481644 FAF2Q96CS3 445 aa18.9■□□□□ 0.62
HSPG2-210ENST00000481644 LENG8Q96PV6 779 aaPredicted RBP18.9■□□□□ 0.62
HSPG2-210ENST00000481644 WRAP53Q9BUR4 548 aaKnown RBP18.9■□□□□ 0.62
HSPG2-210ENST00000481644 PCDH12Q9NPG4 1184 aa18.9■□□□□ 0.62
HSPG2-210ENST00000481644 LRRK1Q38SD2 2015 aa18.9■□□□□ 0.62
HSPG2-210ENST00000481644 LRRD1A4D1F6 860 aa18.89■□□□□ 0.61
HSPG2-210ENST00000481644 POM121BA6NF01 834 aa18.89■□□□□ 0.61
HSPG2-210ENST00000481644 FPGTO14772 594 aa18.89■□□□□ 0.61
HSPG2-210ENST00000481644 TM7SF2O76062 418 aa18.89■□□□□ 0.61
HSPG2-210ENST00000481644 EPHA8P29322 1005 aaPredicted RBP18.89■□□□□ 0.61
HSPG2-210ENST00000481644 GARSP41250 739 aaKnown RBP18.89■□□□□ 0.61
HSPG2-210ENST00000481644 SLC1A1P43005 524 aa18.89■□□□□ 0.61
HSPG2-210ENST00000481644 MMP13P45452 471 aa18.89■□□□□ 0.61
HSPG2-210ENST00000481644 NOP2P46087 812 aaKnown RBP18.89■□□□□ 0.61
HSPG2-210ENST00000481644 TMEM52BQ4KMG9 183 aa18.89■□□□□ 0.61
HSPG2-210ENST00000481644 MARC1Q5VT66 337 aa18.89■□□□□ 0.61
HSPG2-210ENST00000481644 KYAT3Q6YP21 454 aaKnown RBP18.89■□□□□ 0.61
HSPG2-210ENST00000481644 Q6ZSR6 202 aa18.89■□□□□ 0.61
HSPG2-210ENST00000481644 GLRX5Q86SX6 157 aa18.89■□□□□ 0.61
HSPG2-210ENST00000481644 ZSWIM9Q86XI8 627 aa18.89■□□□□ 0.61
HSPG2-210ENST00000481644 PGBD5Q8N414 524 aa18.89■□□□□ 0.61
HSPG2-210ENST00000481644 PQLC3Q8N755 202 aa18.89■□□□□ 0.61
HSPG2-210ENST00000481644 DENND6BQ8NEG7 585 aa18.89■□□□□ 0.61
HSPG2-210ENST00000481644 SAP25Q8TEE9 199 aa18.89■□□□□ 0.61
HSPG2-210ENST00000481644 BMFQ96LC9 184 aa18.89■□□□□ 0.61
HSPG2-210ENST00000481644 KLF6Q99612 283 aaPredicted RBP18.89■□□□□ 0.61
HSPG2-210ENST00000481644 MGME1Q9BQP7 344 aa18.89■□□□□ 0.61
HSPG2-210ENST00000481644 C1QTNF7Q9BXJ2 289 aa18.89■□□□□ 0.61
HSPG2-210ENST00000481644 LUC7LQ9NQ29 371 aaKnown RBP18.89■□□□□ 0.61
HSPG2-210ENST00000481644 SCUBE2Q9NQ36 999 aa18.89■□□□□ 0.61
HSPG2-210ENST00000481644 ATP8A1Q9Y2Q0 1164 aa18.89■□□□□ 0.61
HSPG2-210ENST00000481644 PCDHA13Q9Y5I0 950 aa18.89■□□□□ 0.61
HSPG2-210ENST00000481644 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.88■□□□□ 0.61
HSPG2-210ENST00000481644 TTC24A2A3L6 582 aaPredicted RBP18.88■□□□□ 0.61
HSPG2-210ENST00000481644 SPOPO43791 374 aa18.88■□□□□ 0.61
HSPG2-210ENST00000481644 MAP3K6O95382 1288 aa18.88■□□□□ 0.61
HSPG2-210ENST00000481644 KRT1P04264 644 aa18.88■□□□□ 0.61
HSPG2-210ENST00000481644 FTH1P19P0C7X4 201 aa18.88■□□□□ 0.61
HSPG2-210ENST00000481644 SHC2P98077 582 aa18.88■□□□□ 0.61
HSPG2-210ENST00000481644 BNIP3Q12983 259 aa18.88■□□□□ 0.61
HSPG2-210ENST00000481644 ODF2Q5BJF6 829 aa18.88■□□□□ 0.61
HSPG2-210ENST00000481644 LRRC38Q5VT99 294 aa18.88■□□□□ 0.61
HSPG2-210ENST00000481644 TIGD7Q6NT04 549 aaPredicted RBP18.88■□□□□ 0.61
HSPG2-210ENST00000481644 DCP2Q8IU60 420 aaKnown RBP18.88■□□□□ 0.61
HSPG2-210ENST00000481644 SLC22A18ASQ8N1D0 253 aa18.88■□□□□ 0.61
HSPG2-210ENST00000481644 ECHDC3Q96DC8 303 aa18.88■□□□□ 0.61
HSPG2-210ENST00000481644 RNF157Q96PX1 679 aa18.88■□□□□ 0.61
HSPG2-210ENST00000481644 NUDCD1Q96RS6 583 aa18.88■□□□□ 0.61
HSPG2-210ENST00000481644 HYOU1Q9Y4L1 999 aa18.88■□□□□ 0.61
HSPG2-210ENST00000481644 SOWAHDA6NJG2 315 aa18.87■□□□□ 0.61
HSPG2-210ENST00000481644 ZNF487B1APH4 448 aa18.87■□□□□ 0.61
HSPG2-210ENST00000481644 RIOK3O14730 519 aaKnown RBP18.87■□□□□ 0.61
HSPG2-210ENST00000481644 PRKCGP05129 697 aa18.87■□□□□ 0.61
HSPG2-210ENST00000481644 TNNT1P13805 278 aa18.87■□□□□ 0.61
HSPG2-210ENST00000481644 CR2P20023 1033 aa18.87■□□□□ 0.61
HSPG2-210ENST00000481644 MX2P20592 715 aa18.87■□□□□ 0.61
HSPG2-210ENST00000481644 COL5A1P20908 1838 aaPredicted RBP18.87■□□□□ 0.61
HSPG2-210ENST00000481644 COMTP21964 271 aa18.87■□□□□ 0.61
HSPG2-210ENST00000481644 MMP12P39900 470 aa18.87■□□□□ 0.61
HSPG2-210ENST00000481644 RABIFP47224 123 aa18.87■□□□□ 0.61
HSPG2-210ENST00000481644 HADHBP55084 474 aaKnown RBP18.87■□□□□ 0.61
HSPG2-210ENST00000481644 MAXP61244 160 aa18.87■□□□□ 0.61
HSPG2-210ENST00000481644 POLR2LP62875 67 aaKnown RBP18.87■□□□□ 0.61
HSPG2-210ENST00000481644 GBE1Q04446 702 aa18.87■□□□□ 0.61
HSPG2-210ENST00000481644 IFI16Q16666 785 aaKnown RBP18.87■□□□□ 0.61
HSPG2-210ENST00000481644 TMTC1Q8IUR5 882 aa18.87■□□□□ 0.61
HSPG2-210ENST00000481644 RHOT1Q8IXI2 618 aa18.87■□□□□ 0.61
HSPG2-210ENST00000481644 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.87■□□□□ 0.61
HSPG2-210ENST00000481644 NSMCE3Q96MG7 304 aa18.87■□□□□ 0.61
HSPG2-210ENST00000481644 NT5MQ9NPB1 228 aa18.87■□□□□ 0.61
HSPG2-210ENST00000481644 FTSJ1Q9UET6 329 aa18.87■□□□□ 0.61
HSPG2-210ENST00000481644 APOBEC2Q9Y235 224 aaKnown RBP18.87■□□□□ 0.61
HSPG2-210ENST00000481644 C3orf70A6NLC5 250 aaPredicted RBP18.86■□□□□ 0.61
HSPG2-210ENST00000481644 TRAFD1O14545 582 aaPredicted RBP18.86■□□□□ 0.61
HSPG2-210ENST00000481644 SDC3O75056 442 aa18.86■□□□□ 0.61
HSPG2-210ENST00000481644 NDUFA10O95299 355 aa18.86■□□□□ 0.61
HSPG2-210ENST00000481644 TRIM16O95361 564 aa18.86■□□□□ 0.61
HSPG2-210ENST00000481644 FECHP22830 423 aa18.86■□□□□ 0.61
HSPG2-210ENST00000481644 IGFALSP35858 605 aa18.86■□□□□ 0.61
HSPG2-210ENST00000481644 SEMG2Q02383 582 aa18.86■□□□□ 0.61
HSPG2-210ENST00000481644 RALGPS1Q5JS13 557 aa18.86■□□□□ 0.61
HSPG2-210ENST00000481644 VSIG1Q86XK7 387 aa18.86■□□□□ 0.61
HSPG2-210ENST00000481644 TEX26Q8N6G2 289 aa18.86■□□□□ 0.61
HSPG2-210ENST00000481644 PDCD6IPQ8WUM4 868 aaKnown RBP18.86■□□□□ 0.61
HSPG2-210ENST00000481644 CENPTQ96BT3 561 aa18.86■□□□□ 0.61
HSPG2-210ENST00000481644 ZNF830Q96NB3 372 aaPredicted RBP18.86■□□□□ 0.61
HSPG2-210ENST00000481644 MAK16Q9BXY0 300 aaKnown RBP18.86■□□□□ 0.61
HSPG2-210ENST00000481644 NOD2Q9HC29 1040 aa18.86■□□□□ 0.61
HSPG2-210ENST00000481644 GPR27Q9NS67 375 aa18.86■□□□□ 0.61
HSPG2-210ENST00000481644 DDX56Q9NY93 547 aaKnown RBP18.86■□□□□ 0.61
HSPG2-210ENST00000481644 TFR2Q9UP52 801 aa18.86■□□□□ 0.61
HSPG2-210ENST00000481644 WASF3Q9UPY6 502 aa18.86■□□□□ 0.61
HSPG2-210ENST00000481644 COQ6Q9Y2Z9 468 aa18.86■□□□□ 0.61
HSPG2-210ENST00000481644 PCDHGC4Q9Y5F7 938 aa18.86■□□□□ 0.61
HSPG2-210ENST00000481644 EPN1Q9Y6I3 576 aaPredicted RBP18.86■□□□□ 0.61
HSPG2-210ENST00000481644 TDRD6O60522 2096 aaKnown RBP18.86■□□□□ 0.61
HSPG2-210ENST00000481644 A0A0A6YYK5 440 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms