RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 PRKCIP41743 596 aa18.74■□□□□ 0.59
CLK1-211ENST00000481641 THOP1P52888 689 aa18.74■□□□□ 0.59
CLK1-211ENST00000481641 IQCB1Q15051 598 aa18.74■□□□□ 0.59
CLK1-211ENST00000481641 IRF4Q15306 451 aa18.74■□□□□ 0.59
CLK1-211ENST00000481641 CDKN3Q16667 212 aa18.74■□□□□ 0.59
CLK1-211ENST00000481641 TMEM52BQ4KMG9 183 aa18.74■□□□□ 0.59
CLK1-211ENST00000481641 PPP1R2P3Q6NXS1 205 aa18.74■□□□□ 0.59
CLK1-211ENST00000481641 RFX8Q6ZV50 586 aa18.74■□□□□ 0.59
CLK1-211ENST00000481641 NYAP1Q6ZVC0 841 aa18.74■□□□□ 0.59
CLK1-211ENST00000481641 NPWQ8N729 165 aa18.74■□□□□ 0.59
CLK1-211ENST00000481641 TSEN2Q8NCE0 465 aaKnown RBP18.74■□□□□ 0.59
CLK1-211ENST00000481641 IFI44Q8TCB0 444 aa18.74■□□□□ 0.59
CLK1-211ENST00000481641 DUSP23Q9BVJ7 150 aa18.74■□□□□ 0.59
CLK1-211ENST00000481641 LOC400499M0QZD8 3231 aa18.74■□□□□ 0.59
CLK1-211ENST00000481641 CPED1A4D0V7 1026 aa18.73■□□□□ 0.59
CLK1-211ENST00000481641 PRPSAP2O60256 369 aa18.73■□□□□ 0.59
CLK1-211ENST00000481641 BRINP1O60477 761 aa18.73■□□□□ 0.59
CLK1-211ENST00000481641 LRCH4O75427 683 aa18.73■□□□□ 0.59
CLK1-211ENST00000481641 RNF8O76064 485 aa18.73■□□□□ 0.59
CLK1-211ENST00000481641 GZMAP12544 262 aa18.73■□□□□ 0.59
CLK1-211ENST00000481641 EIF4A3P38919 411 aaKnown RBP18.73■□□□□ 0.59
CLK1-211ENST00000481641 ADKP55263 362 aaKnown RBP18.73■□□□□ 0.59
CLK1-211ENST00000481641 NR1I3Q14994 352 aa18.73■□□□□ 0.59
CLK1-211ENST00000481641 TCEA2Q15560 299 aa18.73■□□□□ 0.59
CLK1-211ENST00000481641 UGP2Q16851 508 aa18.73■□□□□ 0.59
CLK1-211ENST00000481641 PRRT3Q5FWE3 981 aa18.73■□□□□ 0.59
CLK1-211ENST00000481641 CDCP2Q5VXM1 449 aa18.73■□□□□ 0.59
CLK1-211ENST00000481641 AFMIDQ63HM1 303 aa18.73■□□□□ 0.59
CLK1-211ENST00000481641 GUSBP11Q6P575 273 aa18.73■□□□□ 0.59
CLK1-211ENST00000481641 SRLQ86TD4 932 aa18.73■□□□□ 0.59
CLK1-211ENST00000481641 PHACTR4Q8IZ21 702 aa18.73■□□□□ 0.59
CLK1-211ENST00000481641 CACTIN-AS1Q8N1I8 211 aa18.73■□□□□ 0.59
CLK1-211ENST00000481641 FUCA2Q9BTY2 467 aa18.73■□□□□ 0.59
CLK1-211ENST00000481641 CWC15Q9P013 229 aaKnown RBP18.73■□□□□ 0.59
CLK1-211ENST00000481641 APOBEC3BQ9UH17 382 aaKnown RBP18.73■□□□□ 0.59
CLK1-211ENST00000481641 CSNK1G3Q9Y6M4 447 aa18.73■□□□□ 0.59
CLK1-211ENST00000481641 ATRXP46100 2492 aa18.73■□□□□ 0.59
CLK1-211ENST00000481641 ANKRD36A6QL64 1941 aa18.72■□□□□ 0.59
CLK1-211ENST00000481641 IGSF10Q6WRI0 2623 aa18.72■□□□□ 0.59
CLK1-211ENST00000481641 TSPAN11A1L157 253 aa18.72■□□□□ 0.59
CLK1-211ENST00000481641 CASC3O15234 703 aaKnown RBP18.72■□□□□ 0.59
CLK1-211ENST00000481641 PALMO75781 387 aa18.72■□□□□ 0.59
CLK1-211ENST00000481641 SERPINC1P01008 464 aa18.72■□□□□ 0.59
CLK1-211ENST00000481641 CELA2BP08218 269 aaPredicted RBP18.72■□□□□ 0.59
CLK1-211ENST00000481641 C6P13671 934 aa18.72■□□□□ 0.59
CLK1-211ENST00000481641 TCF4P15884 667 aa18.72■□□□□ 0.59
CLK1-211ENST00000481641 IL1R2P27930 398 aa18.72■□□□□ 0.59
CLK1-211ENST00000481641 DUSP3P51452 185 aaPredicted RBP18.72■□□□□ 0.59
CLK1-211ENST00000481641 ELP6Q0PNE2 266 aa18.72■□□□□ 0.59
CLK1-211ENST00000481641 PTK2BQ14289 1009 aa18.72■□□□□ 0.59
CLK1-211ENST00000481641 WSCD2Q2TBF2 565 aa18.72■□□□□ 0.59
CLK1-211ENST00000481641 FAXCQ5TGI0 409 aa18.72■□□□□ 0.59
CLK1-211ENST00000481641 ZCCHC8Q6NZY4 707 aaKnown RBP18.72■□□□□ 0.59
CLK1-211ENST00000481641 CRTC1Q6UUV9 634 aa18.72■□□□□ 0.59
CLK1-211ENST00000481641 FNIP1Q8TF40 1166 aa18.72■□□□□ 0.59
CLK1-211ENST00000481641 NSMCE3Q96MG7 304 aa18.72■□□□□ 0.59
CLK1-211ENST00000481641 IL12RB2Q99665 862 aa18.72■□□□□ 0.59
CLK1-211ENST00000481641 LRRC61Q9BV99 259 aa18.72■□□□□ 0.59
CLK1-211ENST00000481641 C1QTNF7Q9BXJ2 289 aa18.72■□□□□ 0.59
CLK1-211ENST00000481641 CLPBQ9H078 707 aa18.72■□□□□ 0.59
CLK1-211ENST00000481641 SPASTQ9UBP0 616 aa18.72■□□□□ 0.59
CLK1-211ENST00000481641 RP1P56715 2156 aa18.72■□□□□ 0.59
CLK1-211ENST00000481641 TTC24A2A3L6 582 aaPredicted RBP18.71■□□□□ 0.59
CLK1-211ENST00000481641 RIOK3O14730 519 aaKnown RBP18.71■□□□□ 0.59
CLK1-211ENST00000481641 MUSKO15146 869 aa18.71■□□□□ 0.59
CLK1-211ENST00000481641 TGM2P21980 687 aa18.71■□□□□ 0.59
CLK1-211ENST00000481641 EIF2S3P41091 472 aaKnown RBP18.71■□□□□ 0.59
CLK1-211ENST00000481641 LIG3P49916 1009 aa18.71■□□□□ 0.59
CLK1-211ENST00000481641 YPEL5P62699 121 aa18.71■□□□□ 0.59
CLK1-211ENST00000481641 LRRC14Q15048 493 aa18.71■□□□□ 0.59
CLK1-211ENST00000481641 SMTNL2Q2TAL5 461 aa18.71■□□□□ 0.59
CLK1-211ENST00000481641 SOWAHCQ53LP3 525 aaPredicted RBP18.71■□□□□ 0.59
CLK1-211ENST00000481641 CFAP58Q5T655 872 aa18.71■□□□□ 0.59
CLK1-211ENST00000481641 MACC1Q6ZN28 852 aa18.71■□□□□ 0.59
CLK1-211ENST00000481641 EFL1Q7Z2Z2 1120 aaKnown RBP18.71■□□□□ 0.59
CLK1-211ENST00000481641 MAPK15Q8TD08 544 aa18.71■□□□□ 0.59
CLK1-211ENST00000481641 HCAR2Q8TDS4 363 aa18.71■□□□□ 0.59
CLK1-211ENST00000481641 BTN2A2Q8WVV5 523 aa18.71■□□□□ 0.59
CLK1-211ENST00000481641 TSACCQ96A04 125 aaPredicted RBP18.71■□□□□ 0.59
CLK1-211ENST00000481641 ABCG4Q9H172 646 aa18.71■□□□□ 0.59
CLK1-211ENST00000481641 SP110Q9HB58 689 aa18.71■□□□□ 0.59
CLK1-211ENST00000481641 DONSONQ9NYP3 566 aa18.71■□□□□ 0.59
CLK1-211ENST00000481641 EIF3CLB5ME19 914 aaKnown RBP18.7■□□□□ 0.58
CLK1-211ENST00000481641 CSO75390 466 aaKnown RBP18.7■□□□□ 0.58
CLK1-211ENST00000481641 MPOP05164 745 aa18.7■□□□□ 0.58
CLK1-211ENST00000481641 GP1BAP07359 652 aa18.7■□□□□ 0.58
CLK1-211ENST00000481641 TSHRP16473 764 aa18.7■□□□□ 0.58
CLK1-211ENST00000481641 ABCG1P45844 678 aa18.7■□□□□ 0.58
CLK1-211ENST00000481641 COL9A2Q14055 689 aaPredicted RBP18.7■□□□□ 0.58
CLK1-211ENST00000481641 DPYSQ14117 519 aa18.7■□□□□ 0.58
CLK1-211ENST00000481641 GRM3Q14832 879 aa18.7■□□□□ 0.58
CLK1-211ENST00000481641 PERM1Q5SV97 790 aa18.7■□□□□ 0.58
CLK1-211ENST00000481641 ERAP2Q6P179 960 aa18.7■□□□□ 0.58
CLK1-211ENST00000481641 ZNF641Q96N77 438 aaPredicted RBP18.7■□□□□ 0.58
CLK1-211ENST00000481641 TUBGCP5Q96RT8 1024 aa18.7■□□□□ 0.58
CLK1-211ENST00000481641 EIF3CQ99613 913 aaKnown RBP18.7■□□□□ 0.58
CLK1-211ENST00000481641 CINPQ9BW66 212 aaPredicted RBP18.7■□□□□ 0.58
CLK1-211ENST00000481641 SLC13A1Q9BZW2 595 aa18.7■□□□□ 0.58
CLK1-211ENST00000481641 ISCUQ9H1K1 167 aa18.7■□□□□ 0.58
CLK1-211ENST00000481641 USP29Q9HBJ7 922 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms