RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 IL4RP24394 825 aa17.17■□□□□ 0.34
HSPG2-209ENST00000480900 SERPINA4P29622 427 aa17.17■□□□□ 0.34
HSPG2-209ENST00000480900 HSPA9P38646 679 aaKnown RBP17.17■□□□□ 0.34
HSPG2-209ENST00000480900 RABIFP47224 123 aa17.17■□□□□ 0.34
HSPG2-209ENST00000480900 AP1S1P61966 158 aa17.17■□□□□ 0.34
HSPG2-209ENST00000480900 SLC10A7Q0GE19 358 aa17.17■□□□□ 0.34
HSPG2-209ENST00000480900 LBRQ14739 615 aaKnown RBP17.17■□□□□ 0.34
HSPG2-209ENST00000480900 PDK2Q15119 407 aa17.17■□□□□ 0.34
HSPG2-209ENST00000480900 UGP2Q16851 508 aa17.17■□□□□ 0.34
HSPG2-209ENST00000480900 TMEM52BQ4KMG9 183 aa17.17■□□□□ 0.34
HSPG2-209ENST00000480900 CFAP58Q5T655 872 aa17.17■□□□□ 0.34
HSPG2-209ENST00000480900 CAMK1DQ8IU85 385 aa17.17■□□□□ 0.34
HSPG2-209ENST00000480900 LRRC49Q8IUZ0 686 aa17.17■□□□□ 0.34
HSPG2-209ENST00000480900 ATPAF2Q8N5M1 289 aa17.17■□□□□ 0.34
HSPG2-209ENST00000480900 PNPLA1Q8N8W4 532 aa17.17■□□□□ 0.34
HSPG2-209ENST00000480900 C1QTNF7Q9BXJ2 289 aa17.17■□□□□ 0.34
HSPG2-209ENST00000480900 MSRB2Q9Y3D2 182 aa17.17■□□□□ 0.34
HSPG2-209ENST00000480900 MYLKQ15746 1914 aa17.16■□□□□ 0.34
HSPG2-209ENST00000480900 MUSKO15146 869 aa17.16■□□□□ 0.34
HSPG2-209ENST00000480900 MAFKO60675 156 aa17.16■□□□□ 0.34
HSPG2-209ENST00000480900 TM7SF2O76062 418 aa17.16■□□□□ 0.34
HSPG2-209ENST00000480900 MTA2O94776 668 aa17.16■□□□□ 0.34
HSPG2-209ENST00000480900 PEX11BO96011 259 aa17.16■□□□□ 0.34
HSPG2-209ENST00000480900 CD48P09326 243 aa17.16■□□□□ 0.34
HSPG2-209ENST00000480900 GJC1P36383 396 aa17.16■□□□□ 0.34
HSPG2-209ENST00000480900 MMRN1Q13201 1228 aa17.16■□□□□ 0.34
HSPG2-209ENST00000480900 DPYSL3Q14195 570 aa17.16■□□□□ 0.34
HSPG2-209ENST00000480900 ZNF235Q14590 738 aa17.16■□□□□ 0.34
HSPG2-209ENST00000480900 ERAP2Q6P179 960 aa17.16■□□□□ 0.34
HSPG2-209ENST00000480900 CPNE8Q86YQ8 564 aa17.16■□□□□ 0.34
HSPG2-209ENST00000480900 EID2Q8N6I1 236 aa17.16■□□□□ 0.34
HSPG2-209ENST00000480900 GATA6Q92908 595 aa17.16■□□□□ 0.34
HSPG2-209ENST00000480900 CENPTQ96BT3 561 aa17.16■□□□□ 0.34
HSPG2-209ENST00000480900 ECHDC3Q96DC8 303 aa17.16■□□□□ 0.34
HSPG2-209ENST00000480900 CNDP2Q96KP4 475 aaKnown RBP17.16■□□□□ 0.34
HSPG2-209ENST00000480900 ZNF670Q9BS34 389 aa17.16■□□□□ 0.34
HSPG2-209ENST00000480900 WRAP53Q9BUR4 548 aaKnown RBP17.16■□□□□ 0.34
HSPG2-209ENST00000480900 PCDH12Q9NPG4 1184 aa17.16■□□□□ 0.34
HSPG2-209ENST00000480900 SPTLC3Q9NUV7 552 aa17.16■□□□□ 0.34
HSPG2-209ENST00000480900 ATP8A1Q9Y2Q0 1164 aa17.16■□□□□ 0.34
HSPG2-209ENST00000480900 ANKRD11Q6UB99 2663 aaPredicted RBP17.16■□□□□ 0.34
HSPG2-209ENST00000480900 LRP4O75096 1905 aa17.15■□□□□ 0.34
HSPG2-209ENST00000480900 ASXL3Q9C0F0 2248 aa17.15■□□□□ 0.34
HSPG2-209ENST00000480900 SPTY2D1-AS1A0A0U1RR47 76 aa17.15■□□□□ 0.34
HSPG2-209ENST00000480900 ENC1O14682 589 aa17.15■□□□□ 0.34
HSPG2-209ENST00000480900 MMP20O60882 483 aa17.15■□□□□ 0.34
HSPG2-209ENST00000480900 LDOC1O95751 146 aaPredicted RBP17.15■□□□□ 0.34
HSPG2-209ENST00000480900 ITIH2P19823 946 aa17.15■□□□□ 0.34
HSPG2-209ENST00000480900 MMP12P39900 470 aa17.15■□□□□ 0.34
HSPG2-209ENST00000480900 ARHGAP25P42331 645 aa17.15■□□□□ 0.34
HSPG2-209ENST00000480900 SCNN1BP51168 640 aa17.15■□□□□ 0.34
HSPG2-209ENST00000480900 TAS2R40P59535 323 aa17.15■□□□□ 0.34
HSPG2-209ENST00000480900 BCL2L1Q07817 233 aa17.15■□□□□ 0.34
HSPG2-209ENST00000480900 FZD2Q14332 565 aa17.15■□□□□ 0.34
HSPG2-209ENST00000480900 ATP13A4Q4VNC1 1196 aa17.15■□□□□ 0.34
HSPG2-209ENST00000480900 UNQ6494/PRO21346Q6UXR6 183 aa17.15■□□□□ 0.34
HSPG2-209ENST00000480900 ZSWIM9Q86XI8 627 aa17.15■□□□□ 0.34
HSPG2-209ENST00000480900 MAP7D3Q8IWC1 876 aa17.15■□□□□ 0.34
HSPG2-209ENST00000480900 RHOT2Q8IXI1 618 aa17.15■□□□□ 0.34
HSPG2-209ENST00000480900 BBS5Q8N3I7 341 aa17.15■□□□□ 0.34
HSPG2-209ENST00000480900 KCTD6Q8NC69 237 aa17.15■□□□□ 0.34
HSPG2-209ENST00000480900 SLC35G2Q8TBE7 412 aa17.15■□□□□ 0.34
HSPG2-209ENST00000480900 NSMCE1Q8WV22 266 aa17.15■□□□□ 0.34
HSPG2-209ENST00000480900 RFFLQ8WZ73 363 aa17.15■□□□□ 0.34
HSPG2-209ENST00000480900 SPOCK2Q92563 424 aa17.15■□□□□ 0.34
HSPG2-209ENST00000480900 FAF2Q96CS3 445 aa17.15■□□□□ 0.34
HSPG2-209ENST00000480900 TMEM121BQ9BXQ6 578 aaPredicted RBP17.15■□□□□ 0.34
HSPG2-209ENST00000480900 INTUQ9ULD6 942 aa17.15■□□□□ 0.34
HSPG2-209ENST00000480900 APC2O95996 2303 aa17.15■□□□□ 0.34
HSPG2-209ENST00000480900 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.14■□□□□ 0.33
HSPG2-209ENST00000480900 GOLGA8CPA6NN73 597 aa17.14■□□□□ 0.33
HSPG2-209ENST00000480900 TOR1BO14657 336 aa17.14■□□□□ 0.33
HSPG2-209ENST00000480900 RIOK3O14730 519 aaKnown RBP17.14■□□□□ 0.33
HSPG2-209ENST00000480900 MFSD11O43934 449 aa17.14■□□□□ 0.33
HSPG2-209ENST00000480900 SDC3O75056 442 aa17.14■□□□□ 0.33
HSPG2-209ENST00000480900 PROS1P07225 676 aa17.14■□□□□ 0.33
HSPG2-209ENST00000480900 CR2P20023 1033 aa17.14■□□□□ 0.33
HSPG2-209ENST00000480900 DGKAP23743 735 aa17.14■□□□□ 0.33
HSPG2-209ENST00000480900 IGFALSP35858 605 aa17.14■□□□□ 0.33
HSPG2-209ENST00000480900 PFN3P60673 137 aa17.14■□□□□ 0.33
HSPG2-209ENST00000480900 MESDQ14696 234 aa17.14■□□□□ 0.33
HSPG2-209ENST00000480900 PAFAH1B3Q15102 231 aaKnown RBP17.14■□□□□ 0.33
HSPG2-209ENST00000480900 ANKRD20A8PQ5CZ79 823 aa17.14■□□□□ 0.33
HSPG2-209ENST00000480900 RALGPS1Q5JS13 557 aa17.14■□□□□ 0.33
HSPG2-209ENST00000480900 PARGQ86W56 976 aa17.14■□□□□ 0.33
HSPG2-209ENST00000480900 PCDH19Q8TAB3 1148 aa17.14■□□□□ 0.33
HSPG2-209ENST00000480900 MGME1Q9BQP7 344 aa17.14■□□□□ 0.33
HSPG2-209ENST00000480900 PCDHGA1Q9Y5H4 931 aa17.14■□□□□ 0.33
HSPG2-209ENST00000480900 CFAP69A5D8W1 941 aa17.13■□□□□ 0.33
HSPG2-209ENST00000480900 TMEM110-MUSTN1A8MSY1 372 aa17.13■□□□□ 0.33
HSPG2-209ENST00000480900 C1QTNF9BB2RNN3 333 aa17.13■□□□□ 0.33
HSPG2-209ENST00000480900 TRAFD1O14545 582 aaPredicted RBP17.13■□□□□ 0.33
HSPG2-209ENST00000480900 PIAS2O75928 621 aa17.13■□□□□ 0.33
HSPG2-209ENST00000480900 C1QTNF9P0C862 333 aa17.13■□□□□ 0.33
HSPG2-209ENST00000480900 C6P13671 934 aa17.13■□□□□ 0.33
HSPG2-209ENST00000480900 NME1P15531 152 aaKnown RBP17.13■□□□□ 0.33
HSPG2-209ENST00000480900 GARSP41250 739 aaKnown RBP17.13■□□□□ 0.33
HSPG2-209ENST00000480900 MMP13P45452 471 aa17.13■□□□□ 0.33
HSPG2-209ENST00000480900 HNRNPKP61978 463 aaKnown RBP eCLIP17.13■□□□□ 0.33
HSPG2-209ENST00000480900 POLR2LP62875 67 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms