RNA–Protein interactions for RNA: ENST00000480737.1

FN1-221, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 384 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-221ENST00000480737 RNF144BQ7Z419 303 aa3.2□□□□□ -1.9
FN1-221ENST00000480737 WDR5BQ86VZ2 330 aa3.2□□□□□ -1.9
FN1-221ENST00000480737 RBFAQ8N0V3 343 aa3.2□□□□□ -1.9
FN1-221ENST00000480737 ZNF527Q8NB42 609 aa3.2□□□□□ -1.9
FN1-221ENST00000480737 CEP76Q8TAP6 659 aa3.2□□□□□ -1.9
FN1-221ENST00000480737 FRAT1Q92837 279 aaPredicted RBP3.2□□□□□ -1.9
FN1-221ENST00000480737 COG3Q96JB2 828 aa3.2□□□□□ -1.9
FN1-221ENST00000480737 DUX5Q96PT3 197 aa3.2□□□□□ -1.9
FN1-221ENST00000480737 TEFMQ96QE5 360 aaKnown RBP3.2□□□□□ -1.9
FN1-221ENST00000480737 PIGSQ96S52 555 aa3.2□□□□□ -1.9
FN1-221ENST00000480737 PLEKHF1Q96S99 279 aa3.2□□□□□ -1.9
FN1-221ENST00000480737 DDX23Q9BUQ8 820 aaKnown RBP3.2□□□□□ -1.9
FN1-221ENST00000480737 CDK19Q9BWU1 502 aa3.2□□□□□ -1.9
FN1-221ENST00000480737 PABPC3Q9H361 631 aaKnown RBP3.2□□□□□ -1.9
FN1-221ENST00000480737 GAREM1Q9H706 876 aa3.2□□□□□ -1.9
FN1-221ENST00000480737 OBP2BQ9NPH6 170 aa3.2□□□□□ -1.9
FN1-221ENST00000480737 SMC4Q9NTJ3 1288 aa3.2□□□□□ -1.9
FN1-221ENST00000480737 BABAM1Q9NWV8 329 aa3.2□□□□□ -1.9
FN1-221ENST00000480737 NDUFAF4Q9P032 175 aa3.2□□□□□ -1.9
FN1-221ENST00000480737 UPB1Q9UBR1 384 aa3.2□□□□□ -1.9
FN1-221ENST00000480737 SWAP70Q9UH65 585 aa3.2□□□□□ -1.9
FN1-221ENST00000480737 CDC23Q9UJX2 597 aa3.2□□□□□ -1.9
FN1-221ENST00000480737 FBXO9Q9UK97 447 aaPredicted RBP3.2□□□□□ -1.9
FN1-221ENST00000480737 A0A1W2PP64 1363 aa3.2□□□□□ -1.9
FN1-221ENST00000480737 PTPRMP28827 1452 aa3.2□□□□□ -1.9
FN1-221ENST00000480737 IQSEC2Q5JU85 1478 aa3.2□□□□□ -1.9
FN1-221ENST00000480737 CDC42BPGQ6DT37 1551 aa3.2□□□□□ -1.9
FN1-221ENST00000480737 TTC21BQ7Z4L5 1316 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 RIMS2Q9UQ26 1411 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 TULP4Q9NRJ4 1543 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 PLSCR5A0PG75 271 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 NTN3O00634 580 aaPredicted RBP3.19□□□□□ -1.9
FN1-221ENST00000480737 HTATSF1O43719 755 aaKnown RBP3.19□□□□□ -1.9
FN1-221ENST00000480737 KCNJ13O60928 360 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 ACTL6BO94805 426 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 HSP90AA1P07900 732 aaKnown RBP3.19□□□□□ -1.9
FN1-221ENST00000480737 DAOP14920 347 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 GSTM2P28161 218 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 PDIA3P30101 505 aaKnown RBP3.19□□□□□ -1.9
FN1-221ENST00000480737 DCTDP32321 178 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 SERPINF1P36955 418 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 CLCN5P51795 746 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 KRTAP10-5P60370 271 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 AP2B1P63010 937 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 UBE4AQ14139 1066 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 PLCB4Q15147 1175 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 ZNF718Q3SXZ3 478 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 BMP2KLQ5H9B9 411 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 PGBD2Q6P3X8 592 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 CASC1Q6TDU7 716 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 PATL1Q86TB9 770 aaKnown RBP3.19□□□□□ -1.9
FN1-221ENST00000480737 MUC20Q8N307 709 aaPredicted RBP3.19□□□□□ -1.9
FN1-221ENST00000480737 STT3BQ8TCJ2 826 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 CPT1BQ92523 772 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 ARRDC3Q96B67 414 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 CADM1Q9BY67 442 aaKnown RBP3.19□□□□□ -1.9
FN1-221ENST00000480737 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.19□□□□□ -1.98e-6■□□□□ 10.8
FN1-221ENST00000480737 BRD8Q9H0E9 1235 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 GRHL1Q9NZI5 618 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 FBXO40Q9UH90 709 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 SLC25A13Q9UJS0 675 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 NLRP1Q9C000 1473 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 CDK12Q9NYV4 1490 aaPredicted RBP3.19□□□□□ -1.9
FN1-221ENST00000480737 SPATA31D1Q6ZQQ2 1576 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 QRICH2Q9H0J4 1663 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 TMEM131LA2VDJ0 1609 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 CPSF1Q10570 1443 aaKnown RBP3.19□□□□□ -1.9
FN1-221ENST00000480737 YEATS2Q9ULM3 1422 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 PTPRCP08575 1304 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 TTC21AQ8NDW8 1320 aa3.19□□□□□ -1.9
FN1-221ENST00000480737 CLTCQ00610 1675 aaKnown RBP3.18□□□□□ -1.9
FN1-221ENST00000480737 ADGRB2O60241 1585 aa3.18□□□□□ -1.9
FN1-221ENST00000480737 A2ML1A8K2U0 1454 aa3.18□□□□□ -1.9
FN1-221ENST00000480737 RTL1A6NKG5 1358 aa3.18□□□□□ -1.9
FN1-221ENST00000480737 KIAA0232Q92628 1395 aa3.18□□□□□ -1.9
FN1-221ENST00000480737 PIK3R4Q99570 1358 aa3.18□□□□□ -1.9
FN1-221ENST00000480737 A0A087WV62 115 aa3.18□□□□□ -1.9
FN1-221ENST00000480737 A0A0U1RQJ8 604 aa3.18□□□□□ -1.9
FN1-221ENST00000480737 LINC01565O15544 149 aa3.18□□□□□ -1.9
FN1-221ENST00000480737 EPB41L2O43491 1005 aaKnown RBP3.18□□□□□ -1.9
FN1-221ENST00000480737 ZNF500O60304 480 aaPredicted RBP3.18□□□□□ -1.9
FN1-221ENST00000480737 HMMRO75330 724 aa3.18□□□□□ -1.9
FN1-221ENST00000480737 SKAP2O75563 359 aaPredicted RBP3.18□□□□□ -1.9
FN1-221ENST00000480737 LYL1P12980 280 aa3.18□□□□□ -1.9
FN1-221ENST00000480737 GYS1P13807 737 aa3.18□□□□□ -1.9
FN1-221ENST00000480737 CHN1P15882 459 aa3.18□□□□□ -1.9
FN1-221ENST00000480737 SERPINA4P29622 427 aa3.18□□□□□ -1.9
FN1-221ENST00000480737 AVPR2P30518 371 aa3.18□□□□□ -1.9
FN1-221ENST00000480737 TNNT2P45379 298 aaPredicted RBP3.18□□□□□ -1.9
FN1-221ENST00000480737 GRSF1Q12849 480 aaKnown RBP eCLIP3.18□□□□□ -1.9
FN1-221ENST00000480737 BRD3Q15059 726 aa3.18□□□□□ -1.9
FN1-221ENST00000480737 RPS6KA2Q15349 733 aa3.18□□□□□ -1.9
FN1-221ENST00000480737 MAP9Q49MG5 647 aa3.18□□□□□ -1.9
FN1-221ENST00000480737 NCAPH2Q6IBW4 605 aa3.18□□□□□ -1.9
FN1-221ENST00000480737 XRRA1Q6P2D8 792 aa3.18□□□□□ -1.9
FN1-221ENST00000480737 MON1BQ7L1V2 547 aa3.18□□□□□ -1.9
FN1-221ENST00000480737 FJX1Q86VR8 437 aa3.18□□□□□ -1.9
FN1-221ENST00000480737 TMC8Q8IU68 726 aa3.18□□□□□ -1.9
FN1-221ENST00000480737 RPAP2Q8IXW5 612 aaPredicted RBP3.18□□□□□ -1.9
FN1-221ENST00000480737 SCAMP5Q8TAC9 235 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms