RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 LYNP07948 512 aa17.25■□□□□ 0.35
PKD1-213ENST00000480227 MMP2P08253 660 aa17.25■□□□□ 0.35
PKD1-213ENST00000480227 CKBP12277 381 aa17.25■□□□□ 0.35
PKD1-213ENST00000480227 ETFBP38117 255 aa17.25■□□□□ 0.35
PKD1-213ENST00000480227 NSUN2Q08J23 767 aaKnown RBP eCLIP17.25■□□□□ 0.35
PKD1-213ENST00000480227 HNRNPDQ14103 355 aaKnown RBP17.25■□□□□ 0.35
PKD1-213ENST00000480227 VARS2Q5ST30 1063 aaKnown RBP17.25■□□□□ 0.35
PKD1-213ENST00000480227 TRIM67Q6ZTA4 783 aa17.25■□□□□ 0.35
PKD1-213ENST00000480227 PTAR1Q7Z6K3 402 aaPredicted RBP17.25■□□□□ 0.35
PKD1-213ENST00000480227 SDCCAG8Q86SQ7 713 aaPredicted RBP17.25■□□□□ 0.35
PKD1-213ENST00000480227 UMODL1-AS1Q8N2C9 162 aa17.25■□□□□ 0.35
PKD1-213ENST00000480227 RP9Q8TA86 221 aaKnown RBP17.25■□□□□ 0.35
PKD1-213ENST00000480227 USP13Q92995 863 aaPredicted RBP17.25■□□□□ 0.35
PKD1-213ENST00000480227 MRPL57Q9BQC6 102 aaKnown RBP17.25■□□□□ 0.35
PKD1-213ENST00000480227 ZYG11BQ9C0D3 744 aa17.25■□□□□ 0.35
PKD1-213ENST00000480227 SP110Q9HB58 689 aa17.25■□□□□ 0.35
PKD1-213ENST00000480227 NCKIPSDQ9NZQ3 722 aa17.25■□□□□ 0.35
PKD1-213ENST00000480227 GREB1Q4ZG55 1949 aa17.25■□□□□ 0.35
PKD1-213ENST00000480227 ENO4A6NNW6 628 aa17.25■□□□□ 0.35
PKD1-213ENST00000480227 WASH4PA8MWX3 477 aa17.25■□□□□ 0.35
PKD1-213ENST00000480227 ENO3P13929 434 aaPredicted RBP17.25■□□□□ 0.35
PKD1-213ENST00000480227 KCNA5P22460 613 aa17.25■□□□□ 0.35
PKD1-213ENST00000480227 LAMA2P24043 3122 aaKnown RBP17.25■□□□□ 0.35
PKD1-213ENST00000480227 SERPINH1P50454 418 aaKnown RBP17.25■□□□□ 0.35
PKD1-213ENST00000480227 RENBPP51606 427 aa17.25■□□□□ 0.35
PKD1-213ENST00000480227 PLK1P53350 603 aa17.25■□□□□ 0.35
PKD1-213ENST00000480227 PKNOX1P55347 436 aa17.25■□□□□ 0.35
PKD1-213ENST00000480227 NRG1Q02297 640 aaPredicted RBP17.25■□□□□ 0.35
PKD1-213ENST00000480227 GSTA3Q16772 222 aa17.25■□□□□ 0.35
PKD1-213ENST00000480227 FAM26DQ5JW98 314 aa17.25■□□□□ 0.35
PKD1-213ENST00000480227 MARC1Q5VT66 337 aa17.25■□□□□ 0.35
PKD1-213ENST00000480227 RAP1GAP2Q684P5 730 aa17.25■□□□□ 0.35
PKD1-213ENST00000480227 PAXIP1Q6ZW49 1069 aaPredicted RBP17.25■□□□□ 0.35
PKD1-213ENST00000480227 KBTBD6Q86V97 674 aa17.25■□□□□ 0.35
PKD1-213ENST00000480227 PDSS2Q86YH6 399 aa17.25■□□□□ 0.35
PKD1-213ENST00000480227 DCP1BQ8IZD4 617 aaKnown RBP17.25■□□□□ 0.35
PKD1-213ENST00000480227 KDM1BQ8NB78 822 aa17.25■□□□□ 0.35
PKD1-213ENST00000480227 OR13J1Q8NGT2 312 aa17.25■□□□□ 0.35
PKD1-213ENST00000480227 KLHL4Q9C0H6 718 aa17.25■□□□□ 0.35
PKD1-213ENST00000480227 IGSF5Q9NSI5 407 aa17.25■□□□□ 0.35
PKD1-213ENST00000480227 SLC27A5Q9Y2P5 690 aa17.25■□□□□ 0.35
PKD1-213ENST00000480227 A0A087X1B8 175 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 SLCO1B7G3V0H7 640 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 H3BNX3 289 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 ARSAP15289 507 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 POLD2P49005 469 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 THOP1P52888 689 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 ATXN3P54252 364 aaPredicted RBP17.24■□□□□ 0.35
PKD1-213ENST00000480227 AQP4P55087 323 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 POU4F1Q01851 419 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 FBXL22Q6P050 247 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 MSANTD2Q6P1R3 559 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 C16orf89Q6UX73 402 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 SLC24A5Q71RS6 500 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 PPP2R3CQ969Q6 453 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 NR1H4Q96RI1 486 aaPredicted RBP17.24■□□□□ 0.35
PKD1-213ENST00000480227 TUBGCP5Q96RT8 1024 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 PRKD2Q9BZL6 878 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 COPG1Q9Y678 874 aaKnown RBP17.24■□□□□ 0.35
PKD1-213ENST00000480227 HEATR9A2RTY3 570 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 OR51F1A6NGY5 319 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 TMEM88BA6NKF7 163 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 STX16-NPEPL1H3BU86 382 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 INPPL1O15357 1258 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 RNASEH1O60930 286 aaKnown RBP17.24■□□□□ 0.35
PKD1-213ENST00000480227 SMIM24O75264 130 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 RHOQP17081 205 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 PAX3P23760 479 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 ARSDP51689 593 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 HK2P52789 917 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 MSLNQ13421 630 aaPredicted RBP17.24■□□□□ 0.35
PKD1-213ENST00000480227 PGBD5Q8N414 524 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 CPSF7Q8N684 471 aaKnown RBP17.24■□□□□ 0.35
PKD1-213ENST00000480227 MYEOVQ96EZ4 313 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 PPP1R2P1Q96PQ5 205 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 FBXO44Q9H4M3 255 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 ATP13A1Q9HD20 1204 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 CLIC5Q9NZA1 410 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 STK39Q9UEW8 545 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 KCTD3Q9Y597 815 aa17.24■□□□□ 0.35
PKD1-213ENST00000480227 TADA2AO75478 443 aa17.23■□□□□ 0.35
PKD1-213ENST00000480227 NDST2P52849 883 aa17.23■□□□□ 0.35
PKD1-213ENST00000480227 SREBF2Q12772 1141 aa17.23■□□□□ 0.35
PKD1-213ENST00000480227 BNC2Q6ZN30 1099 aaPredicted RBP17.23■□□□□ 0.35
PKD1-213ENST00000480227 LRRC49Q8IUZ0 686 aa17.23■□□□□ 0.35
PKD1-213ENST00000480227 SH3RF2Q8TEC5 729 aa17.23■□□□□ 0.35
PKD1-213ENST00000480227 SERPINI1Q99574 410 aa17.23■□□□□ 0.35
PKD1-213ENST00000480227 ZNF385DQ9H6B1 395 aa17.23■□□□□ 0.35
PKD1-213ENST00000480227 ARNT2Q9HBZ2 717 aa17.23■□□□□ 0.35
PKD1-213ENST00000480227 ZBTB26Q9HCK0 441 aa17.23■□□□□ 0.35
PKD1-213ENST00000480227 TMEM248Q9NWD8 314 aa17.23■□□□□ 0.35
PKD1-213ENST00000480227 UXTQ9UBK9 157 aaPredicted RBP17.23■□□□□ 0.35
PKD1-213ENST00000480227 CCDC166P0CW27 439 aa17.23■□□□□ 0.35
PKD1-213ENST00000480227 ATP5F1P24539 256 aaPredicted RBP17.23■□□□□ 0.35
PKD1-213ENST00000480227 DNAJB1P25685 340 aa17.23■□□□□ 0.35
PKD1-213ENST00000480227 ART3Q13508 389 aa17.23■□□□□ 0.35
PKD1-213ENST00000480227 NFE2Q16621 373 aaPredicted RBP17.23■□□□□ 0.35
PKD1-213ENST00000480227 FAM83EQ2M2I3 478 aa17.23■□□□□ 0.35
PKD1-213ENST00000480227 CTXN3Q4LDR2 81 aa17.23■□□□□ 0.35
PKD1-213ENST00000480227 TRAF7Q6Q0C0 670 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms