RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 RETSATQ6NUM9 610 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 DNAJC24Q6P3W2 148 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 PKN3Q6P5Z2 889 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 WDR59Q6PJI9 974 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 SERPINA13PQ6UXR4 307 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 MMS22LQ6ZRQ5 1243 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 ZNF571Q7Z3V5 609 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-213ENST00000480102 POLNQ7Z5Q5 900 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 SLFN11Q7Z7L1 901 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 DSG4Q86SJ6 1040 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 CHSY1Q86X52 802 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 SYT12Q8IV01 421 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 PASD1Q8IV76 773 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 SLITRK4Q8IW52 837 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 RAVER1Q8IY67 606 aaKnown RBP5.01□□□□□ -1.61
PTCD3-213ENST00000480102 CCDC170Q8IYT3 715 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 TMIEQ8NEW7 156 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 ST13P5Q8NFI4 369 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-213ENST00000480102 FRS2Q8WU20 508 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 SLC20A1Q8WUM9 679 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 RXFP2Q8WXD0 754 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 ASB12Q8WXK4 309 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 CPA5Q8WXQ8 436 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 NDRG1Q92597 394 aaKnown RBP5.01□□□□□ -1.61
PTCD3-213ENST00000480102 EAF1Q96JC9 268 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-213ENST00000480102 MRGPRX3Q96LB0 322 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 CCDC114Q96M63 670 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 ZNF599Q96NL3 588 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 RPRD1AQ96P16 312 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-213ENST00000480102 ALPK1Q96QP1 1244 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 SELENOOQ9BVL4 669 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 TKTL2Q9H0I9 626 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 C19orf73Q9NVV2 129 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 GPATCH2Q9NW75 528 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 ZNHIT6Q9NWK9 470 aaKnown RBP5.01□□□□□ -1.61
PTCD3-213ENST00000480102 WSB2Q9NYS7 404 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-213ENST00000480102 CALCOCO1Q9P1Z2 691 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 OR12D3Q9UGF7 316 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 INTS6Q9UL03 887 aaKnown RBP5.01□□□□□ -1.61
PTCD3-213ENST00000480102 CLEC4EQ9ULY5 219 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 NEU3Q9UQ49 428 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 MFHAS1Q9Y4C4 1052 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 HS3ST4Q9Y661 456 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-213ENST00000480102 CACNA1AO00555 2505 aa5.01□□□□□ -1.61
PTCD3-213ENST00000480102 EP300Q09472 2414 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-213ENST00000480102 KMT2EQ8IZD2 1858 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 CFAP54Q96N23 3096 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 PATJQ8NI35 1801 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 COL4A3Q01955 1670 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 A0A0A6YYK5 440 aaPredicted RBP5□□□□□ -1.61
PTCD3-213ENST00000480102 IGHV1OR15-9A0A0B4J2B8 117 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 TCRBV21S2A2A0A5A6 115 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 CFAP69A5D8W1 941 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 BTNL10A8MVZ5 291 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 WASH3PC4AMC7 463 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 E9PAM4 449 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 H0Y626 953 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 I6L893 689 aaPredicted RBP5□□□□□ -1.61
PTCD3-213ENST00000480102 TOR1BO14657 336 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 LATO43561 262 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 AP1G1O43747 822 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 DFNA5O60443 496 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 RNASEH1O60930 286 aaKnown RBP5□□□□□ -1.61
PTCD3-213ENST00000480102 ZNF189O75820 626 aaPredicted RBP5□□□□□ -1.61
PTCD3-213ENST00000480102 ZMPSTE24O75844 475 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 RNF8O76064 485 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 UBOX5O94941 541 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 ADCY5O95622 1261 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 FTLP02792 175 aaPredicted RBP5□□□□□ -1.61
PTCD3-213ENST00000480102 TMEM253P0C7T8 217 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 ZNF883P0CG24 379 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 TNFAIP3P21580 790 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 RRM1P23921 792 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 CD70P32970 193 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 GDNFP39905 211 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 CSKP41240 450 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 SLC1A1P43005 524 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 CSNK1DP48730 415 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 FNTBP49356 437 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 TPMTP51580 245 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 CCR5P51681 352 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 PITX1P78337 314 aaPredicted RBP5□□□□□ -1.61
PTCD3-213ENST00000480102 CLCQ05315 142 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 NSUN2Q08J23 767 aaKnown RBP eCLIP5□□□□□ -1.61
PTCD3-213ENST00000480102 PUM1Q14671 1186 aaKnown RBP eCLIP5□□□□□ -1.61
PTCD3-213ENST00000480102 RFTN1Q14699 578 aaPredicted RBP5□□□□□ -1.61
PTCD3-213ENST00000480102 FUT11Q495W5 492 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 FSCBQ5H9T9 825 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 WDR45BQ5MNZ6 344 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 SYCP2LQ5T4T6 812 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 ERMARDQ5T6L9 678 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 C9orf64Q5T6V5 341 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 EMC10Q5UCC4 262 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 TAF3Q5VWG9 929 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 CDCP2Q5VXM1 449 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 AFMIDQ63HM1 303 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 E4F1Q66K89 784 aaPredicted RBP5□□□□□ -1.61
PTCD3-213ENST00000480102 RAP1GAP2Q684P5 730 aa5□□□□□ -1.61
PTCD3-213ENST00000480102 ZNF776Q68DI1 518 aaPredicted RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms