RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 SETD4Q9NVD3 440 aa6.4□□□□□ -1.38
PBRM1-220ENST00000480064 EHD3Q9NZN3 535 aa6.4□□□□□ -1.38
PBRM1-220ENST00000480064 AKAP7Q9P0M2 348 aaPredicted RBP6.4□□□□□ -1.38
PBRM1-220ENST00000480064 ABI3Q9P2A4 366 aa6.4□□□□□ -1.38
PBRM1-220ENST00000480064 GABRQQ9UN88 632 aa6.4□□□□□ -1.38
PBRM1-220ENST00000480064 REXO2Q9Y3B8 237 aaKnown RBP6.4□□□□□ -1.38
PBRM1-220ENST00000480064 CHST2Q9Y4C5 530 aa6.4□□□□□ -1.38
PBRM1-220ENST00000480064 FAM90A8PA6NJQ4 464 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 ADAMDEC1O15204 470 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 PAPSS1O43252 624 aaPredicted RBP6.39□□□□□ -1.39
PBRM1-220ENST00000480064 PPFIA2O75334 1257 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 CDKL5O76039 1030 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 PENKP01210 267 aaPredicted RBP6.39□□□□□ -1.39
PBRM1-220ENST00000480064 SLC4A1P02730 911 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 TFP02787 698 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 FAM90A13PP0C7W8 464 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 FAM90A24PP0C7X0 464 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 TNFRSF1AP19438 455 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 TRIM21P19474 475 aaKnown RBP6.39□□□□□ -1.39
PBRM1-220ENST00000480064 TGM2P21980 687 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 MAPK3P27361 379 aaPredicted RBP6.39□□□□□ -1.39
PBRM1-220ENST00000480064 CTGFP29279 349 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 HOXC8P31273 242 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 ADPRHP54922 357 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 TPD52P55327 224 aaPredicted RBP6.39□□□□□ -1.39
PBRM1-220ENST00000480064 FOXL1Q12952 345 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 RALGDSQ12967 914 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 CRHR2Q13324 411 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 KCNC3Q14003 757 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 DRAP1Q14919 205 aaPredicted RBP6.39□□□□□ -1.39
PBRM1-220ENST00000480064 PPA1Q15181 289 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 ALG11Q2TAA5 492 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 COL28A1Q2UY09 1125 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 KIRREL2Q6UWL6 708 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 NUP54Q7Z3B4 507 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 POLNQ7Z5Q5 900 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 CAMKMTQ7Z624 323 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 TTC9BQ8N6N2 239 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 TSPAN14Q8NG11 270 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 FIBINQ8TAL6 211 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 MR1Q95460 341 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 AK8Q96MA6 479 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 SNX18Q96RF0 628 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 TEX101Q9BY14 249 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 CXorf56Q9H5V9 222 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 TMEM248Q9NWD8 314 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 WSB2Q9NYS7 404 aaPredicted RBP6.39□□□□□ -1.39
PBRM1-220ENST00000480064 FBXO40Q9UH90 709 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 MAP3K2Q9Y2U5 619 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 CMAHPQ9Y471 501 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 MAU2Q9Y6X3 613 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 ABCC9O60706 1549 aa6.39□□□□□ -1.39
PBRM1-220ENST00000480064 LOC102723996A0A087X1L8 192 aa6.38□□□□□ -1.39
PBRM1-220ENST00000480064 LRRD1A4D1F6 860 aa6.38□□□□□ -1.39
PBRM1-220ENST00000480064 RNASET2O00584 256 aaKnown RBP6.38□□□□□ -1.39
PBRM1-220ENST00000480064 STAM2O75886 525 aa6.38□□□□□ -1.39
PBRM1-220ENST00000480064 ZNF182P17025 639 aaPredicted RBP6.38□□□□□ -1.39
PBRM1-220ENST00000480064 TCEA1P23193 301 aaKnown RBP6.38□□□□□ -1.39
PBRM1-220ENST00000480064 PRKCIP41743 596 aa6.38□□□□□ -1.39
PBRM1-220ENST00000480064 ACTN3Q08043 901 aaPredicted RBP6.38□□□□□ -1.39
PBRM1-220ENST00000480064 SLFN13Q68D06 897 aa6.38□□□□□ -1.39
PBRM1-220ENST00000480064 Q6ZWC4 215 aa6.38□□□□□ -1.39
PBRM1-220ENST00000480064 SLC9B2Q86UD5 537 aa6.38□□□□□ -1.39
PBRM1-220ENST00000480064 KLBQ86Z14 1044 aa6.38□□□□□ -1.39
PBRM1-220ENST00000480064 SYCP3Q8IZU3 236 aa6.38□□□□□ -1.39
PBRM1-220ENST00000480064 PI4KAP1Q8N8J0 262 aa6.38□□□□□ -1.39
PBRM1-220ENST00000480064 ANKRD20A12PQ8NF67 263 aa6.38□□□□□ -1.39
PBRM1-220ENST00000480064 ABHD11Q8NFV4 315 aa6.38□□□□□ -1.39
PBRM1-220ENST00000480064 RP9Q8TA86 221 aaKnown RBP6.38□□□□□ -1.39
PBRM1-220ENST00000480064 PSMA8Q8TAA3 256 aa6.38□□□□□ -1.39
PBRM1-220ENST00000480064 ZFPM2Q8WW38 1151 aa6.38□□□□□ -1.39
PBRM1-220ENST00000480064 LPIN2Q92539 896 aa6.38□□□□□ -1.39
PBRM1-220ENST00000480064 NACC2Q96BF6 587 aa6.38□□□□□ -1.39
PBRM1-220ENST00000480064 PABPC5Q96DU9 382 aaKnown RBP6.38□□□□□ -1.39
PBRM1-220ENST00000480064 ADAD1Q96M93 576 aaKnown RBP6.38□□□□□ -1.39
PBRM1-220ENST00000480064 RUNDC3BQ96NL0 473 aa6.38□□□□□ -1.39
PBRM1-220ENST00000480064 OR2A14Q96R47 310 aa6.38□□□□□ -1.39
PBRM1-220ENST00000480064 SIN3AQ96ST3 1273 aa6.38□□□□□ -1.39
PBRM1-220ENST00000480064 GLIS2Q9BZE0 524 aaPredicted RBP6.38□□□□□ -1.39
PBRM1-220ENST00000480064 TNMDQ9H2S6 317 aa6.38□□□□□ -1.39
PBRM1-220ENST00000480064 PDZD7Q9H5P4 517 aa6.38□□□□□ -1.39
PBRM1-220ENST00000480064 IL1RAPL2Q9NP60 686 aa6.38□□□□□ -1.39
PBRM1-220ENST00000480064 MID1IP1Q9NPA3 183 aa6.38□□□□□ -1.39
PBRM1-220ENST00000480064 ASNSD1Q9NWL6 643 aa6.38□□□□□ -1.39
PBRM1-220ENST00000480064 TRMT1Q9NXH9 659 aaKnown RBP6.38□□□□□ -1.39
PBRM1-220ENST00000480064 CNOT8Q9UFF9 292 aaKnown RBP6.38□□□□□ -1.39
PBRM1-220ENST00000480064 HOOK1Q9UJC3 728 aaKnown RBP6.38□□□□□ -1.39
PBRM1-220ENST00000480064 LIPT1Q9Y234 373 aa6.38□□□□□ -1.39
PBRM1-220ENST00000480064 CARD8Q9Y2G2 431 aa6.38□□□□□ -1.39
PBRM1-220ENST00000480064 SLC30A1Q9Y6M5 507 aa6.38□□□□□ -1.39
PBRM1-220ENST00000480064 UTYO14607 1347 aa6.37□□□□□ -1.39
PBRM1-220ENST00000480064 ZNF536O15090 1300 aa6.37□□□□□ -1.39
PBRM1-220ENST00000480064 IGSF1Q8N6C5 1336 aa6.37□□□□□ -1.39
PBRM1-220ENST00000480064 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.37□□□□□ -1.39
PBRM1-220ENST00000480064 GAGE12BA1L429 117 aa6.37□□□□□ -1.39
PBRM1-220ENST00000480064 KRT87PA6NCN2 255 aa6.37□□□□□ -1.39
PBRM1-220ENST00000480064 GAGE12HA6NDE8 117 aa6.37□□□□□ -1.39
PBRM1-220ENST00000480064 OR6C76A6NM76 312 aa6.37□□□□□ -1.39
PBRM1-220ENST00000480064 PGRMC2O15173 223 aa6.37□□□□□ -1.39
PBRM1-220ENST00000480064 USP12O75317 370 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms