RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 C9orf64Q5T6V5 341 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 C22orf39Q6P5X5 142 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 SERPINA13PQ6UXR4 307 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 C4orf22Q6V702 233 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 USP30Q70CQ3 517 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 DSG4Q86SJ6 1040 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 APCDD1Q8J025 514 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 SLC35F6Q8N357 371 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 BBS5Q8N3I7 341 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 TMIEQ8NEW7 156 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 CYB5D2Q8WUJ1 264 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 P3H4Q92791 437 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 TADA1Q96BN2 335 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 FAM129BQ96TA1 746 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 NAPGQ99747 312 aaPredicted RBP9.03□□□□□ -0.96
DDX56-211ENST00000479602 FERMT1Q9BQL6 677 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 OSBPL1AQ9BXW6 950 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 MAK16Q9BXY0 300 aaKnown RBP9.03□□□□□ -0.96
DDX56-211ENST00000479602 CIPCQ9C0C6 399 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 SLC39A8Q9C0K1 460 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 SGK2Q9HBY8 427 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 TM9SF3Q9HD45 589 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 DKK3Q9UBP4 350 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 UBA2Q9UBT2 640 aaPredicted RBP9.03□□□□□ -0.96
DDX56-211ENST00000479602 SEPT3Q9UH03 358 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 DNAI1Q9UI46 699 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 SNX11Q9Y5W9 270 aa9.03□□□□□ -0.96
DDX56-211ENST00000479602 FAM170AA1A519 330 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 CTAGE9A4FU28 777 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 PGRMC1O00264 195 aaKnown RBP9.02□□□□□ -0.97
DDX56-211ENST00000479602 KCNK3O14649 394 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 SLC7A4O43246 635 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 ZNF500O60304 480 aaPredicted RBP9.02□□□□□ -0.97
DDX56-211ENST00000479602 SOCS5O75159 536 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 CER1O95813 267 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 ITGAVP06756 1048 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 ATXN1LP0C7T5 689 aaKnown RBP9.02□□□□□ -0.97
DDX56-211ENST00000479602 STIP1P31948 543 aaKnown RBP9.02□□□□□ -0.97
DDX56-211ENST00000479602 ACVRL1P37023 503 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 SSR1P43307 286 aaKnown RBP9.02□□□□□ -0.97
DDX56-211ENST00000479602 FNTAP49354 379 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 RPL26P61254 145 aaKnown RBP9.02□□□□□ -0.97
DDX56-211ENST00000479602 GBE1Q04446 702 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 SLC10A2Q12908 348 aaPredicted RBP9.02□□□□□ -0.97
DDX56-211ENST00000479602 SHBQ15464 509 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 SMAD1Q15797 465 aaKnown RBP9.02□□□□□ -0.97
DDX56-211ENST00000479602 SLC45A4Q5BKX6 768 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 CDKL3Q8IVW4 592 aaPredicted RBP9.02□□□□□ -0.97
DDX56-211ENST00000479602 CCDC13Q8IYE1 715 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 OR7D4Q8NG98 312 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 OR2AP1Q8NGE2 309 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 OR2A12Q8NGT7 310 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 PTPRN2Q92932 1015 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 ECHDC3Q96DC8 303 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 RUNDC3BQ96NL0 473 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 WDR24Q96S15 920 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 OSBPL9Q96SU4 736 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 CDC6Q99741 560 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 BTBD1Q9H0C5 482 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 KDM4CQ9H3R0 1056 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 MTG2Q9H4K7 406 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 TRHDEQ9UKU6 1024 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 FZD4Q9ULV1 537 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 RPL26L1Q9UNX3 145 aaKnown RBP9.02□□□□□ -0.97
DDX56-211ENST00000479602 DRG1Q9Y295 367 aaKnown RBP9.02□□□□□ -0.97
DDX56-211ENST00000479602 BTBD3Q9Y2F9 522 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 ANKRD6Q9Y2G4 727 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 ATP8A1Q9Y2Q0 1164 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 MGAQ8IWI9 3026 aa9.02□□□□□ -0.97
DDX56-211ENST00000479602 SETXQ7Z333 2677 aaKnown RBP9.01□□□□□ -0.97
DDX56-211ENST00000479602 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.01□□□□□ -0.97
DDX56-211ENST00000479602 A0A1W2PPC4 97 aa9.01□□□□□ -0.97
DDX56-211ENST00000479602 A0A1W2PR77 199 aa9.01□□□□□ -0.97
DDX56-211ENST00000479602 MEI4A8MW99 385 aa9.01□□□□□ -0.97
DDX56-211ENST00000479602 H0Y8X5 98 aa9.01□□□□□ -0.97
DDX56-211ENST00000479602 CCDC188H7C350 402 aa9.01□□□□□ -0.97
DDX56-211ENST00000479602 VILLO15195 856 aa9.01□□□□□ -0.97
DDX56-211ENST00000479602 FANCGO15287 622 aa9.01□□□□□ -0.97
DDX56-211ENST00000479602 FLRT2O43155 660 aa9.01□□□□□ -0.97
DDX56-211ENST00000479602 TMCC1O94876 653 aa9.01□□□□□ -0.97
DDX56-211ENST00000479602 SEMA4FO95754 770 aa9.01□□□□□ -0.97
DDX56-211ENST00000479602 ADH1BP00325 375 aa9.01□□□□□ -0.97
DDX56-211ENST00000479602 PRNPP04156 253 aa9.01□□□□□ -0.97
DDX56-211ENST00000479602 WNT1P04628 370 aa9.01□□□□□ -0.97
DDX56-211ENST00000479602 ATP1A1P05023 1023 aaKnown RBP9.01□□□□□ -0.97
DDX56-211ENST00000479602 ACADMP11310 421 aa9.01□□□□□ -0.97
DDX56-211ENST00000479602 GNG11P61952 73 aa9.01□□□□□ -0.97
DDX56-211ENST00000479602 SNRPD1P62314 119 aaKnown RBP9.01□□□□□ -0.97
DDX56-211ENST00000479602 RACK1P63244 317 aaKnown RBP9.01□□□□□ -0.97
DDX56-211ENST00000479602 ADCY2Q08462 1091 aa9.01□□□□□ -0.97
DDX56-211ENST00000479602 LBRQ14739 615 aaKnown RBP9.01□□□□□ -0.97
DDX56-211ENST00000479602 RFX6Q8HWS3 928 aa9.01□□□□□ -0.97
DDX56-211ENST00000479602 CCDC50Q8IVM0 306 aa9.01□□□□□ -0.97
DDX56-211ENST00000479602 ZNF366Q8N895 744 aa9.01□□□□□ -0.97
DDX56-211ENST00000479602 ACTL9Q8TC94 416 aa9.01□□□□□ -0.97
DDX56-211ENST00000479602 NSMCE1Q8WV22 266 aa9.01□□□□□ -0.97
DDX56-211ENST00000479602 TFB1MQ8WVM0 346 aaKnown RBP9.01□□□□□ -0.97
DDX56-211ENST00000479602 RNF25Q96BH1 459 aaPredicted RBP9.01□□□□□ -0.97
DDX56-211ENST00000479602 TEKT5Q96M29 485 aa9.01□□□□□ -0.97
DDX56-211ENST00000479602 GDAP1L1Q96MZ0 367 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms