RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 PLA2G6O60733 806 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 DIAPH2O60879 1101 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 CRYABP02511 175 aaKnown RBP4.2□□□□□ -1.74
CMSS1-204ENST00000479555 FGAP02671 866 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 CLTAP09496 248 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 LINGO3P0C6S8 592 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 PDHBP11177 359 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 NQO1P15559 274 aaKnown RBP4.2□□□□□ -1.74
CMSS1-204ENST00000479555 KCNA3P22001 575 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 CMA1P23946 247 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 HOXA7P31268 230 aaPredicted RBP4.2□□□□□ -1.74
CMSS1-204ENST00000479555 MLH1P40692 756 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 MTHFSP49914 203 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 COPB1P53618 953 aaKnown RBP4.2□□□□□ -1.74
CMSS1-204ENST00000479555 POLE2P56282 527 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 IRX4P78413 519 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 ZBED6P86452 979 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 RNASELQ05823 741 aaKnown RBP4.2□□□□□ -1.74
CMSS1-204ENST00000479555 PDCLQ13371 301 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 SNX1Q13596 522 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 CUL1Q13616 776 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 RCN1Q15293 331 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 NPY5RQ15761 445 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 MPEG1Q2M385 716 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 PARP6Q2NL67 630 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 TWISTNBQ3B726 338 aaPredicted RBP4.2□□□□□ -1.74
CMSS1-204ENST00000479555 PTCHD3Q3KNS1 767 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 GRAMD1BQ3KR37 738 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 CCDC14Q49A88 953 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 PARP10Q53GL7 1025 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 ODF2Q5BJF6 829 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 WASHC2DQ5SRD0 308 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 MFSD4BQ5TF39 518 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 ARL6IP4Q66PJ3 421 aaKnown RBP4.2□□□□□ -1.74
CMSS1-204ENST00000479555 KRTAP5-1Q6L8H4 278 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 DLK2Q6UY11 383 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 C9orf47Q6ZRZ4 202 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 TAOK1Q7L7X3 1001 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 ERICH1Q86X53 443 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 TMEM139Q8IV31 216 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.2□□□□□ -1.74
CMSS1-204ENST00000479555 ST13P4Q8IZP2 240 aaPredicted RBP4.2□□□□□ -1.74
CMSS1-204ENST00000479555 SYCP3Q8IZU3 236 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 ARHGAP24Q8N264 748 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 SCAIQ8N9R8 606 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 ZNF527Q8NB42 609 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.2□□□□□ -1.74
CMSS1-204ENST00000479555 CCDC110Q8TBZ0 833 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 ADAMTS18Q8TE60 1221 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 POF1BQ8WVV4 589 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 IGFBPL1Q8WX77 278 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 CTNNBL1Q8WYA6 563 aaPredicted RBP4.2□□□□□ -1.74
CMSS1-204ENST00000479555 CCT6BQ92526 530 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 NCSTNQ92542 709 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 LTV1Q96GA3 475 aaPredicted RBP4.2□□□□□ -1.74
CMSS1-204ENST00000479555 VPS50Q96JG6 964 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 PLEKHF1Q96S99 279 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 SEC62Q99442 399 aaKnown RBP4.2□□□□□ -1.74
CMSS1-204ENST00000479555 C17orf80Q9BSJ5 609 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 NUP58Q9BVL2 599 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 STK33Q9BYT3 514 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 WDR12Q9GZL7 423 aaKnown RBP4.2□□□□□ -1.74
CMSS1-204ENST00000479555 NECTIN3Q9NQS3 549 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 IL20Q9NYY1 176 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 SUCLA2Q9P2R7 463 aaPredicted RBP4.2□□□□□ -1.74
CMSS1-204ENST00000479555 DNMT3BQ9UBC3 853 aaKnown RBP4.2□□□□□ -1.74
CMSS1-204ENST00000479555 TUBGCP4Q9UGJ1 667 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 HERC5Q9UII4 1024 aaKnown RBP4.2□□□□□ -1.74
CMSS1-204ENST00000479555 TUBE1Q9UJT0 475 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 AMFRQ9UKV5 643 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 FADS3Q9Y5Q0 445 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 BZW2Q9Y6E2 419 aaKnown RBP4.2□□□□□ -1.74
CMSS1-204ENST00000479555 LRRC7Q96NW7 1537 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 ATP10DQ9P241 1426 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 RIMS2Q9UQ26 1411 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 MROH7Q68CQ1 1323 aa4.2□□□□□ -1.74
CMSS1-204ENST00000479555 ZC3H13Q5T200 1668 aaKnown RBP4.19□□□□□ -1.74
CMSS1-204ENST00000479555 FRMPD1Q5SYB0 1578 aa4.19□□□□□ -1.74
CMSS1-204ENST00000479555 PXDNLA1KZ92 1463 aa4.19□□□□□ -1.74
CMSS1-204ENST00000479555 ERVK-7P63135 1459 aa4.19□□□□□ -1.74
CMSS1-204ENST00000479555 RFX7Q2KHR2 1363 aa4.19□□□□□ -1.74
CMSS1-204ENST00000479555 JCADQ9P266 1359 aa4.19□□□□□ -1.74
CMSS1-204ENST00000479555 hCG_1642624A0A1W2PR95 340 aa4.19□□□□□ -1.74
CMSS1-204ENST00000479555 AGPSO00116 658 aa4.19□□□□□ -1.74
CMSS1-204ENST00000479555 PODXLO00592 558 aa4.19□□□□□ -1.74
CMSS1-204ENST00000479555 NDC80O14777 642 aa4.19□□□□□ -1.74
CMSS1-204ENST00000479555 CCNT2O60583 730 aaKnown RBP4.19□□□□□ -1.74
CMSS1-204ENST00000479555 SNX2O60749 519 aa4.19□□□□□ -1.74
CMSS1-204ENST00000479555 SRGAP2O75044 1071 aa4.19□□□□□ -1.74
CMSS1-204ENST00000479555 PPP6R2O75170 966 aa4.19□□□□□ -1.74
CMSS1-204ENST00000479555 TBCAO75347 108 aaKnown RBP4.19□□□□□ -1.74
CMSS1-204ENST00000479555 SKAP2O75563 359 aaPredicted RBP4.19□□□□□ -1.74
CMSS1-204ENST00000479555 STAM2O75886 525 aa4.19□□□□□ -1.74
CMSS1-204ENST00000479555 PORP16435 677 aaPredicted RBP4.19□□□□□ -1.74
CMSS1-204ENST00000479555 XBP1P17861 261 aa4.19□□□□□ -1.74
CMSS1-204ENST00000479555 EPHA3P29320 983 aa4.19□□□□□ -1.74
CMSS1-204ENST00000479555 HDAC4P56524 1084 aa4.19□□□□□ -1.74
CMSS1-204ENST00000479555 TNNC1P63316 161 aa4.19□□□□□ -1.74
CMSS1-204ENST00000479555 RIPPLY1Q0D2K3 151 aa4.19□□□□□ -1.74
CMSS1-204ENST00000479555 LMAN2Q12907 356 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms